MitoPedia

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Bioblasts - Richard Altmann and MiPArt by Odra Noel
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MitoPedia

MitoPedia

Development of a consistent nomenclature in mitochondrial physiology, in the spirit of Gentle Science
MitoPedia


High-resolution terminology - matching measurements at high-resolution



» MitoPedia: Terms and abbreviations - IUPAC guidelines are followed for general terms of physical chemistry[1],[2],[3], extended by concepts of mitochondrial physiology[4] and nonequilibrium thermodynamics[5].





MitoPedia: Concepts

» MitoPedia: MiP concepts
» MitoPedia: Respiratory states[4]
» MitoPedia: Respiratory control ratios[4]
» MitoPedia: SUIT
» MitoFit Quality Control System

MitoPedia: Methods

» MitoPedia: Respirometry
» MitoPedia: Fluorometry
» MitoPedia: Spectrophotometry

MitoPedia: O2k and high-resolution respirometry

» MitoPedia: O2k hardware
» MitoPedia: DatLab

MitoPedia: MiP and biochemistry

» MitoPedia: Substrates and metabolites
» MitoPedia: Uncouplers
» MitoPedia: Inhibitors
» MitoPedia: Sample preparations
» MitoPedia: Permeabilization agents
» MitoPedia: Media for respirometry
» MitoPedia: Enzymes[6]
» Mitochondria and bioblasts: Made history

MitoPedia: Links

» List of Links - Mitochondria: Structure and Function
» Mitochondrial Global Network: List of MitoGlobal Societies

OROBOROS

» O2k-Protocols
» O2k-Publications: Topics
MitoPedia
Bioblast wiki

MitoPedia and Bioblast

The term MitoPedia expresses the link to Wikipedia. We use the MediaWiki software for generating a bottom-up database and glossaries. The 'Bioblast community' of mitochondrial experts is cordially invited to active participation - a vision that may develop further in the future. To make this possible, the OROBOROS-Team continues to work on the Bioblast website as an information synthase - in the spirit of Gentle Science. ~ Gnaiger Erich 09:20, 18 May 2014 (CEST)


MitoPedia

MitoPedia

MitoPedia - high-resolution terminology, matching measurements at high-resolution



MitoPedia term: Dihydro-orotate dehydrogenase - another respiratory Complex at the Q-junction.


» Respiratory control ratios beyond the RCR - coupling:

OXPHOS coupling efficiency OXPHOS efficiency,

ROUTINE coupling efficiency ROUTINE efficiency,

ETS coupling efficiency ETS coupling efficiency.


The Blue Book

MitoPathways - The Blue Book


» HRR - high-resolution respirometry was established 20 years ago: Control of mitochondrial and cellular respiration by oxygen. J Bioenerg Biomembr 1995.


References

  1. Cohen ER, Cvitas T, Frey JG, Holmström B, Kuchitsu K, Marquardt R, Mills I, Pavese F, Quack M, Stohner J, Strauss HL, Takami M, Thor HL (2008) Quantities, Units and Symbols in Physical Chemistry, IUPAC Green Book, 3rd Edition, 2nd Printing, IUPAC & RSC Publishing, Cambridge. - »Bioblast link«
  2. International Union of Biochemistry and Molecular Biology: Recommendations for terminology and databases for biochemical thermodynamics. - »Open Access«
  3. International Union of Biochemistry (1981) Symbolism and terminology in enzyme kinetics. - »Open Access«
  4. 4.0 4.1 4.2 Gnaiger E (2014) Mitochondrial pathways and respiratory control. An introduction to OXPHOS analysis. 4th ed. Mitochondr Physiol Network 19.12. OROBOROS MiPNet Publications, Innsbruck:80 pp. - »Bioblast link«
  5. Gnaiger E (1993) Nonequilibrium thermodynamics of energy transformations. Pure Appl Chem 65:1983-2002. - »Bioblast link«
  6. International Union of Biochemistry (1991) Nomenclature of electron-transfer proteins. Biochim Biophys Acta 1060. - »Open Access«
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