LEAK respiration

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LEAK respiration

Description

L.jpg LEAK respiration or LEAK oxygen flux, L, compensating for proton leak, proton slip, cation cycling and electron leak, is a dissipative component of respiration which is not available for performing biochemical work and thus related to heat production. LEAK respiration is measured in the LEAK state, in the presence of reducing substrate(s), but absence of ADP (theoretically, absence of inorganic phosphate presents an alternative), or after enzymatic inhibition of the phosphorylation system. The LEAK state is the non-phosphorylating resting state of intrinsic uncoupled or dyscoupled respiration when oxygen flux is maintained mainly to compensate for the proton leak at a high chemiosmotic potential, when ATP synthase is not active. In this non-phosphorylating resting state, the electrochemical proton gradient is increased to a maximum, exerting feedback control by depressing oxygen flux to a level determined mainly by the proton leak and the H+/O2 ratio. In this state of maximum protonmotive force, LEAK respiration is higher than the LEAK component in state P (OXPHOS capacity). The conditions for measurement and expression of respiration vary (oxygen flux in state L, JO2L or oxygen flow in state L, IO2L). If these conditions are defined and remain consistent within a given context, then the simple symbol L for respiratory state can be used as a substitute for the more explicit expression for respiratory activity. » MiPNet article

Abbreviation: L

Reference: Gnaiger 2014 MitoPathways, Gnaiger 2009 Int J Biochem Cell Biol


MitoPedia concepts: Respiratory state, Recommended 


MitoPedia methods: Respirometry 


MitoPedia topics: EAGLE 

LEAK respiration: concept-linked terminology of respiratory states

LEAK respiration corresponds to resting, non-phosphorylating electron transfer with a shortcircuit of the proton cycle across the inner mt-membrane due to intrinsic uncoupling or dyscoupling. 2[H] indicates the reduced hydrogen equivalents of CHO substrates and electron transfer to oxygen. H+out are protons pumped out of the matrix phase. Proton leaks (a property of the inner mt-membrane) dissipate energy of translocated protons, and proton slip prevents full translocation of protons across the inner mt-membrane (a property of the proton pumps). Measurement of LEAK respiration is possible in intact cells by inhibition of the phosphorylation system and in mt-preparations supported by an ETS-competent substrate state, exemplifed as the NS-pathway (CI&II-linked substrate supply). Modified after Gnaiger 2014 MitoPathways.
Publications in the MiPMap
Gnaiger E (2014) LEAK respiration: concept-linked terminology of respiratory states. Mitochondr Physiol Network 2014-07-04.

» Gnaiger 2014 MitoPathways

OROBOROS (2014) MiPNet

Abstract: L.jpg Mitochondrial respiratory states have been defined originally by Chance and Williams (1955) as a sequence (from 1 to 5) of titrations and transitions in a respiratory protocol, including State 4 as a LEAK state of respiration obtained after exhaustion of the added ADP. The second state (State 2) is induced by addition of 'high ADP'. Confusion persists in the current literature as to the meaning of State 2, which can be resolved by a transition from a specific protocol-linked to a generalized concept-linked terminology.


O2k-Network Lab: AT Innsbruck Gnaiger E


Labels:




Regulation: Coupling efficiency;uncoupling  Coupling state: LEAK, ETS 

HRR: Theory 



The LEAK state

LEAK states of respiration are frequently called State 4, State 4o, basal state, or inactive state. Importantly, State 2 is not a LEAK state according to the classical definition.
Respiration compensating for the proton leak is the main component of LEAK respiration. If proton leak were the only component involved, it would make sense to simply write leak respiration for the compensatory oxygen flux. Proton slip and cation cycling, however, are also involved to a larger or smaller extent to stimulate LEAK respiration. The upper case 'LEAK', therefore, should make us aware that this is more accurately considered as an acronym, and cannot be taken as a definitive delineation of the stimulatory mechanism in the LEAK state of respiration.
  • Note: The distinction between LEAK and ETS capacity helps to clarify the important difference between physiologically uncoupled or pathologically dyscoupled respiration (LEAK) in contrast to noncoupled respiration (ETS capacity).


Protocols for measurement of LEAK respiration

The LEAK state can be induced experimentally in various ways, which may yield idential estimates of LEAK respiration, or may show deviations that help to critically assess the proper protocol to be applied in specific cases:

a) LEAK state with ATP

LEAK respiration in the presence of ATP, LT, and absence of ATPase activity.
LEAK state with ATP: LT (classical State 4 in isolated mitochondria) after phosphorylation of ADP to ATP is completed, or when a high concentration of ATP is added in the absence of ADP (Gnaiger 2000 Proc Natl Acad Sci U S A).
In contradiction to the original definition of State 2 (ROX), yet with reference to Chance and Williams (1956), 'State 2' has later been used for describing this functionally different state of LEAK respiration:
State 2: substrate added, respiration low due to lack of ADP. .. the controlled respiration prior to addition of ADP, which is strictly termed “state 2”, is functionally the same as state 4, and the latter term is usually used for both states’ (Nicholls & Ferguson 1992).
Thus State 2 was re-defined as functionally the same as State 4. State 2 (Chance and Williams 1955, 1956), however, is substrate-limited residual oxygen consumption at high ADP (ROXD), whereas LN and LT (State 4) are LEAK states in the absence of adenylates (LN: no ADP, no ATP) or presence of ATP (LT).
To overcome the termonological confusion persisting in the scientific literature, the respiratory coupling states of LEAK respiration, OXPHOS capacity and ETS capacity are distinguished from residual oxygen consumption (ROX; Gnaiger 2009).



b) LEAK state with oligomycin

LEAK respiration induced by inhibition of ATP synthase by oligomycin, LOmy.
LEAK state with oligomycin: LOmy (in isolated mitochondria or other mitochondrial preparations, and intact cells).








c) LEAK state without adenylates

LEAK respiration without adenylates, LN.
LEAK state without adenylates: LN (in isolated mitochondria or other mitochondrial preparations, using a protocol different from the classical State 2-3-4 sequence).
Sequential addition of (1) mitochondria, (2) ADP, and (3) reduced substrates is the basis of the original State 1-2-3 definitions of respiratory states (Chance and Williams 1955 part III, 1956), where State 2 is zero respiration or residual oxygen consumption in the absence of substrate. An alternative protocol is well established, as shown e.g. by the classical Fig. 5A (Chance and Williams 1955 part I): 600 µM ADP is added after a state described as ‘Aerobic mitochondria plus succinate’. That state was never defined as ‘State 2’ by Brit Chance. Later Estabrook (1967) made this protocol more popular, with addition of substrate before any ADP or ATP was added.
In this alternative protocol, a respiratory LEAK state is induced in isolated mitochondria, permeabilized tissues, or permeabilized cells, adding the mitochondrial preparation to respiration medium containing inorganic phosphate (State 1), then adding reduced substrate (no external adenylates). This second state (Estabrook 1967) is a non-phosphorylating LEAK state, LN (N for no adenylates; Gnaiger 2009), when substrate-saturated respiration compensates for the proton leak (mainly) in the absence of ADP.



Related terms in MitoPedia

State 4 versus State 2

Static head

State 4 is frequently referred to as 'static head' of isolated mitochondria. Equivalence requires testing, if at State 4 (in a protocol defined by Chance and Williams 1955) ATPase activity is actually zero, such that respiration at State 4 is not partially stimulated by partial recycling of ATP to ADP. In the latter case, State 4 respiration would be higher than LEAK respiration and thus higher than respiration at static head.
OXPHOS-coupled energy cycles. Source: The Blue Book

Respiratory coupling states

P.jpg OXPHOS, P
R.jpg ROUTINE, R
E.jpg ETS, E
L.jpg LEAK, L


References

  1. Caplan SR, Essig A (1983) Bioenergetics and linear nonequilibrium thermodynamics. The steady state. Harvard Univ. Press, Cambridge:435 pp.
  2. Chance B, Williams GR (1955) Respiratory enzymes in oxidative phosphorylation. I. Kinetics of oxygen utilization. J Biol Chem 217:383-93.
  3. Chance B, Williams GR (1955) Respiratory enzymes in oxidative phosphorylation. III. The steady state. J Biol Chem 217:409-27.
  4. Chance B, Williams GR (1956) The respiratory chain and oxidative phosphorylation. Adv Enzymol 17:65-134.
  5. Estabrook R (1967) Mitochondrial respiratory control and the polarographic measurement of ADP:O ratios. Methods Enzymol 10:41-7.
  6. Gnaiger E (1993a) Efficiency and power strategies under hypoxia. Is low efficiency at high glycolytic ATP production a paradox? In: Surviving Hypoxia: Mechanisms of Control and Adaptation. Hochachka PW, Lutz PL, Sick T, Rosenthal M, Van den Thillart G (eds) CRC Press, Boca Raton, Ann Arbor, London, Tokyo:77-109. »Bioblast Access«
  7. Gnaiger E (1993b) Nonequilibrium thermodynamics of energy transformations. Pure Appl Chem 65: 1983-2002. »Open Access«
  8. Gnaiger E (2009) Capacity of oxidative phosphorylation in human skeletal muscle. New perspectives of mitochondrial physiology. Int J Biochem Cell Biol 41: 1837–45. » PMID: 19467914«
  9. Gnaiger E (2014) Mitochondrial pathways and respiratory control. An introduction to OXPHOS analysis. 4th ed. Mitochondr Physiol Network 19.12. OROBOROS MiPNet Publications, Innsbruck:80 pp. »Open Access«
  10. Nicholls DG, Ferguson SJ (2002) Bioenergetics 3. Academic Press, London:287 pp.


Publications in the MiPMap

List of publications: LEAK

Sort in ascending/descending order by a click on one of the small symbols in squares below.
Default sorting: chronological. Empty fields appear first in ascending order. 
 YearReferenceCouplingPathwayPreparationOrganismTissue;cell
Schatton 2017 J Cell Biol2017Schatton D, Pla-Martin D, Marx MC, Hansen H, Mourier A, Nemazanyy I, Pessia A, Zentis P, Corona T, Kondylis V, Barth E, Schauss AC, Velagapudi V, Rugarli EI (2017) CLUH regulates mitochondrial metabolism by controlling translation and decay of target mRNAs. J Cell Biol [Epub ahead of print].LEAK
OXPHOS
ETS
N
NS
Intact cells
Isolated mitochondria
MouseLiver
Gusdon 2017 Exp Gerontol2017Gusdon AM, Callio J, Distefano G, O'Doherty RM, Goodpaster BH, Coen PM, Chu CT (2017) Exercise increases mitochondrial complex I activity and DRP1 expression in the brains of aged mice. Exp Gerontol 90:1-13.LEAK
OXPHOS
N
NS
Isolated mitochondriaMouseNervous system
Lemieux 2017 bioRxiv2017Lemieux H, Blier PU, Gnaiger E (2017) Remodeling pathway control of oxidative phosphorylation by temperature in the heart. bioRxiv doi: https://doi.org/10.1101/103457.LEAK
OXPHOS
ETS
N
S
NS
Permeabilized tissueMouseHeart
MiPNet21.17 BloodCellsIsolation2016-11-14
O2k-Protocols
O2k-Protocols: Isolation of blood cells for HRR.
LEAK
ROUTINE
OXPHOS
ETS
F
N
S
Gp
CIV
NS
ROX
Intact cells
Permeabilized cells
MouseBlood cells
Lymphocyte
Platelet
MiPNet21.06 SUIT RP2016-08-17
O2k-Protocols
SUIT reference protocol for OXPHOS analysis by high-resolution respirometry.
LEAK
OXPHOS
ETS
F
N
S
Gp
CIV
NS
Other combinations
Permeabilized cells
Permeabilized tissue
Homogenate
Isolated mitochondria
MiPNet08.09 CellRespiration2016-08-11
O2k-Protocols contents
High-resolution respirometry and coupling control protocol with intact cells: ROUTINE, LEAK, ETS, ROX.
LEAK
ROUTINE
ETS
Intact cellsHumanBlood cells
Lymphocyte
MiPNet10.04 CellRespiration2016-08-08
O2k-Protocols
An experiment with high-resolution respirometry: coupling control in cell respiration.
LEAK
ROUTINE
ETS
ROXIntact cellsMouseBlood cells
MiPNet21.07 MitoFit DatLab PT2016-07-20
O2k-Protocols
MitoFit DatLab proficiency test.
LEAK
OXPHOS
ETS
F
N
S
Gp
CIV
Other combinations
ROX
Permeabilized cellsHuman
MiPNet12.23 FibreRespiration2016-07-19
O2k-Protocols contents
Mitochondrial respiration in permeabilized fibres: Needle biopsies from horse skeletal muscle.
LEAK
OXPHOS
ETS
N
S
NS
Permeabilized tissueHorseSkeletal muscle
Anand 2016 PLOS ONE2016Anand R, Strecker V, Urbach J, Wittig I, Reichert AS (2016) Mic13 is essential for formation of crista junctions in mammalian cells. PLOS ONE 11:e0160258.LEAK
ROUTINE
OXPHOS
ETS
N
CIV
NS
Other combinations
ROX
Intact cells
Permeabilized cells
HEK
Cheng 2016 Nat Immunol2016Cheng SC, Scicluna BP, Arts RJ, Gresnigt MS, Lachmandas E, Giamarellos-Bourboulis EJ, Kox M, Manjeri GR, Wagenaars JA, Cremer OL, Leentjens J, van der Meer AJ, van de Veerdonk FL, Bonten MJ, Schultz MJ, Willems PH, Pickkers P, Joosten LA, van der Poll T, Netea MG (2016) Broad defects in the energy metabolism of leukocytes underlie immunoparalysis in sepsis. Nat Immunol 17:406-13.LEAK
ROUTINE
ETS
ROXIntact cellsHumanBlood cells
Lymphocyte
Queliconi 2016 PLOS ONE2016Queliconi BB, Kowaltowski AJ, Gottlieb RA (2016) Bicarbonate increases ischemia-reperfusion damage by inhibiting mitophagy. PLOS ONE 11:e0167678.LEAK
OXPHOS
ETS
S
ROX
RatHeart
Price 2016 J Thermal Biol2016Price ER, Sirsat TS, Sirsat SKG, Kang G, Keereetaweep J, Aziz M, Chapman KD, Dzialowski EM (2016) Thermal acclimation in American alligators: Effects of temperature regime on growth rate, mitochondrial function, and membrane composition. J Thermal Biol p11.LEAK
OXPHOS
ETS
N
S
CIV
NS
ROX
Permeabilized tissueReptilesHeart
Skeletal muscle
Salin 2016 Physiol Rep2016Salin K, Villasevil EM, Auer SK, Anderson GJ, Selman C, Metcalfe NB, Chinopoulos C (2016) Simultaneous measurement of mitochondrial respiration and ATP production in tissue homogenates and calculation of effective P/O ratios. Physiol Rep 10.14814/phy2.13007.LEAK
OXPHOS
N
NS
ROX
HomogenateFishesLiver
Reynolds 2016 Am J Physiol Endocrinol Metab2016Reynolds MS, Hancock CR, Ray JD, Kener KB, Draney C, Garland K, Hardman J, Bikman BT, Tessem JS (2016) β-cell deletion of Nr4a1 and Nr4a3 nuclear receptors impedes mitochondrial respiration and insulin secretion. Am J Physiol Endocrinol Metab 311:E186-201.LEAK
ROUTINE
OXPHOS
ETS
N
S
ROX
Intact cells
Permeabilized cells
RatIslet cell;pancreas;thymus
Li 2016 Neurochem Int2016Li H, Liu Y, Lin LT, Wang XR, Du SQ, Yan CQ, He T, Yang JW, Liu CZ (2016) Acupuncture reversed hippocampal mitochondrial dysfunction in vascular dementia rats. Neurochem Int 92:35-42.LEAK
OXPHOS
SIsolated mitochondriaRatNervous system
Bynum 2016 Transfusion2016Bynum JA, Adam Meledeo M, Getz TM, Rodriguez AC, Aden JK, Cap AP, Pidcoke HF (2016) Bioenergetic profiling of platelet mitochondria during storage: 4°C storage extends platelet mitochondrial function and viability. Transfusion 56 Suppl 1:S76-84.LEAK
ROUTINE
ETS
ROXIntact cellsHumanBlood cells
Platelet
Wos 2016 Arch Biochem Biophys2016Woś M, Szczepanowska J, Pikuła S, Tylki-Szymańska A, Zabłocki K, Bandorowicz-Pikuła J (2016) Mitochondrial dysfunction in fibroblasts derived from patients with Niemann-Pick type C disease. Arch Biochem Biophys 593:50-9.LEAK
ETS
NIntact cellsHumanEndothelial;epithelial;mesothelial cell
Fibroblast
Du 2016 Aquat Toxicol2016Du X, Crawford DL, Nacci DE, Oleksiak MF (2016) Heritable oxidative phosphorylation differences in a pollutant resistant Fundulus heteroclitus population. Aquat Toxicol 177:44-50.LEAK
OXPHOS
ETS
N
S
CIV
Other combinations
ROX
Permeabilized cellsFishesLiver
Hagl 2016 Neuromolecular Med2016Hagl S, Asseburg H, Heinrich M, Sus N, Blumrich EM, Dringen R, Frank J, Eckert GP (2016) Effects of long-term rice bran extract supplementation on survival, cognition and brain mitochondrial function in aged NMRI mice. Neuromolecular Med 18:347-63.LEAK
OXPHOS
ETS
N
S
CIV
NS
ROX
Isolated mitochondriaMouseNervous system
Chabi 2016 Exp Gerontol2016Chabi B, Pauly M, Carillon J, Carnac G, Favier FB, Fouret G, Bonafos B, Vanterpool F, Vernus B, Coudray C, Feillet-Coudray C, Bonnieu Z, Lacan D, Koechlin-Ramonatxo C (2016) Protective effect of myostatin gene deletion on aging-related muscle metabolic decline. Exp Gerontol 78:23-31.LEAK
OXPHOS
N
NS
Isolated mitochondriaMouseSkeletal muscle
Stier 2016 Methods Ecol Evol2016Stier A, Romestaing C, Schull Q, Lefol E, Robin JP, Roussel D, Bize P (2016) How to measure mitochondrial function in birds using red blood cells: a case study in the king penguin and perspectives in ecology and evolution. Methods Ecol Evol doi:10.1111/2041-210X.12724.LEAK
ROUTINE
OXPHOS
ETS
N
S
ROX
Intact cellsBirdsSkeletal muscle
Blood cells
Heinonen 2016 Hum Exp Toxicol2016Heinonen JA, Schramko AA, Skrifvars MB, Litonius E, Backman JT, Mervaala E, Rosenberg PH (2016) The effects of intravenous lipid emulsion on hemodynamic recovery and myocardial cell mitochondrial function after bupivacaine toxicity in anesthetized pigs. Hum Exp Toxicol [Epub ahead of print].LEAK
OXPHOS
ETS
F
N
S
NS
HomogenatePigHeart
Davuluri 2016 Proc Natl Acad Sci U S A2016Davuluri G, Song P, Liu Z, Wald D, Sakaguchi TF, Green MR, Devireddy L (2016) Inactivation of 3-hydroxybutyrate dehydrogenase 2 delays zebrafish erythroid maturation by conferring premature mitophagy. Proc Natl Acad Sci U S A 113:E1460-9.LEAK
ROUTINE
ETS
Intact cellsZebrafishBlood cells
Pambianco 2016 Cell Rep2016Pambianco S, Giovarelli M, Perrotta C, Zecchini S, Cervia D3, Di Renzo I, Moscheni C, Ripolone M, Violano R, Moggio M, Bassi MT, Puri PL, Latella L, Clementi E, De Palma C (2016) Reversal of defective mitochondrial biogenesis in limb-girdle muscular dystrophy 2D by independent modulation of histone and PGC-1α acetylation. Cell Rep 17:3010-23.LEAK
OXPHOS
F
N
S
NS
ROX
Intact cells
Permeabilized cells
Isolated mitochondria
MouseSkeletal muscle
Most 2016 Am J Clin Nutr2016Most J, Timmers S, Warnke I, Jocken JW, van Boekschoten M, de Groot P, Bendik I, Schrauwen P, Goossens GH, Blaak EE (2016) Combined epigallocatechin-3-gallate and resveratrol supplementation for 12 wk increases mitochondrial capacity and fat oxidation, but not insulin sensitivity, in obese humans: a randomized controlled trial. Am J Clin Nutr 104:215-27.LEAK
OXPHOS
ETS
F
N
NS
Permeabilized tissueHumanSkeletal muscle
Johnson 2016 Stem Cells Dev2016Johnson J, Lee W, Frazier AE, Vaghjiani V, Laskowski A, Rodriguez AL, Cagnone GL, McKenzie M, White SJ, Nisbet DR, Thorburn DR, St John JC (2016) Deletion of the complex I subunit NDUFS4 adversely modulates cellular differentiation. Stem Cells Dev 25:239-50.LEAK
OXPHOS
NIsolated mitochondriaMouseStem cells
Porter 2016 Cell Metab2016Porter C, Herndon DN, Chondronikola M, Chao T, Annamalai P, Bhattarai N, Saraf MK, Capek KD, Reidy PT, Daquinag AC, Kolonin MG, Rasmussen BB, Borsheim E, Toliver-Kinsky T, Sidossis LS (2016) Human and mouse brown adipose tissue mitochondria have comparable UCP1 function. Cell Metab 24:246-55.LEAK
OXPHOS
ETS
F
N
NS
Other combinations
Permeabilized tissueHuman
Mouse
Skeletal muscle
Fat
MiPNet21.12 Comparison mt respiration media2016
O2k-Protocols
O2k-MultiSensor: Mitochondrial respiration media for HRR and simultaneous O2k-Fluorometry.
LEAK
ROUTINE
OXPHOS
ETS
N
S
NS
ROX
Intact cells
Permeabilized cells
HumanHEK
Berressem 2016 PLOS ONE2016Berressem D, Koch K, Franke N, Klein J, Eckert GP (2016) Intravenous treatment with a long-chain omega-3 lipid emulsion provides neuroprotection in a murine model of ischemic stroke - a pilot study. PLOS ONE 11:e0167329.LEAK
OXPHOS
ETS
N
S
CIV
Intact cellsMouseNervous system
Nemeth 2016 FASEB J2016Németh B, Doczi J, Csete D, Kacso G, Ravasz D, Adams D, Kiss G, Nagy AM, Horvath G, Tretter L, Mócsai A, Csépányi-Kömi R, Iordanov I, Adam-Vizi V, Chinopoulos C (2016) Abolition of mitochondrial substrate-level phosphorylation by itaconic acid produced by LPS-induced Irg1 expression in cells of murine macrophage lineage. FASEB J 30:286-300.LEAK
OXPHOS
SIsolated mitochondriaMouseLiver
Ojuka 2016 Am J Physiol Endocrinol Metab2016Ojuka E, Andrew B, Bezuidenhout N, George S, Maarman G, Madlala HP, Mendham A, Osiki PO (2016) Measurement of β-oxidation capacity of biological samples by respirometry: a review of principles and substrates. Am J Physiol Endocrinol Metab 310:E715-23.LEAK
OXPHOS
ETS
FPermeabilized tissue
Isolated mitochondria
Human
Mouse
Rat
Skeletal muscle
Liver
Ehinger 2016 Mov Disord2016Ehinger JK, Morota S, Hansson MJ, Gesine P, Elmér E (2016) Mitochondrial respiratory function in peripheral blood cells from Huntington’s disease patients. Mov Disord doi:10.1002/mdc3.12308.LEAK
ROUTINE
OXPHOS
ETS
N
S
CIV
NS
Other combinations
ROX
Intact cells
Permeabilized cells
HumanBlood cells
Lymphocyte
Platelet
Abdel-Rahman 2016 Oxid Med Cell Longev2016Abdel-Rahman EA, Mokhtar A, Aaliya A, Radwan Y, Yasseen B, Al-Okda A, Atwa A, Elhanafy E, Habashy M, Ali SS (2016) Resolving contributions of oxygen-consuming and ROS-generating enzymes at the synapse. Oxid Med Cell Longev p19.LEAK
OXPHOS
N
NS
ROX
Permeabilized cellsMouseNervous system
Bratic 2016 PLoS Genet2016Bratic A, Clemente P, Calvo-Garrido J, Maffezzini C, Felser A, Wibom R, Wedell A, Freyer C, Wredenberg A (2016) Mitochondrial polyadenylation is a one-step process required for mRNA integrity and tRNA maturation. PLoS Genet 12:e1006028.LEAK
OXPHOS
ETS
N
CIV
NS
Permeabilized tissueDrosophila
Dias 2016 Neurobiol Aging2016Dias C, Lourenço CF, Ferreiro E, Barbosa RM, Laranjinha J, Ledo A (2016) Age-dependent changes in the glutamate-nitric oxide pathway in the hippocampus of the triple transgenic model of Alzheimer's disease: implications for neurometabolic regulation. Neurobiol Aging 46:84-95.LEAK
ETS
N
S
ROX
Permeabilized tissueMouseNervous system
Chu 2016 World J Gastroenterol2016Chu MJ, Premkumar R, Hickey AJ, Jiang Y, Delahunt B, Phillips AR, Bartlett A (2016) Steatotic livers are susceptible to normothermic ischemia-reperfusion injury from mitochondrial Complex-I dysfunction. World J Gastroenterol 22:4673-84.LEAK
OXPHOS
ETS
N
S
NS
ROX
HomogenateRatLiver
Macheiner 2016 Sci Rep2016Macheiner T, Fengler VH, Agreiter M, Eisenberg T, Madeo F, Kolb D, Huppertz B, Ackbar R, Sargsyan K (2016) Magnetomitotransfer: An efficient way for direct mitochondria transfer into cultured human cells. Sci Rep 6:35571.LEAK
ROUTINE
ETS
ROXFibroblast
Ruas 2016 PLOS ONE2016Ruas JS, Siqueira-Santos ES, Amigo I, Rodrigues-Silva E, Kowaltowski AJ, Castilho RF (2016) Underestimation of the maximal capacity of the mitochondrial electron transport system in oligomycin-treated cells. PLOS ONE 11:e0150967.LEAK
OXPHOS
ETS
NIntact cells
Permeabilized cells
Isolated mitochondria
Human
Rat
Nervous system
Genital
Other cell lines
Strifler 2016b PLOS ONE2016Strifler G, Tuboly E, Görbe A, Boros M, Pécz D, Hartmann P (2016) Targeting mitochondrial dysfunction with L-alpha glycerylphosphorylcholine. PLOS ONE 11:e0166682.LEAK
OXPHOS
ETS
N
S
NS
Other combinations
ROX
HomogenateRatLiver
Ryan 2016 Diabetes2016Ryan TE, Schmidt CA, Green TD, Spangenburg EE, Neufer PD, McClung JM (2016) Targeted expression of catalase to mitochondria protects against ischemic myopathy in high fat fed mice. Diabetes 65:2553-68.LEAK
OXPHOS
ETS
N
S
CIV
Other combinations
ROX
Isolated mitochondriaMouseSkeletal muscle
Kacso 2016 Biochem J2016Kacso G, Ravasz D, Doczi J, Németh B, Madgar O, Saada A, Ilin P, Miller C, Ostergaard E, Iordanov I, Adams D, Vargedo Z, Araki M, Araki K, Nakahara M, Ito H, Gál A, Molnár MJ, Nagy Z, Patocs A, Adam-Vizi V, Chinopoulos C (2016) Two transgenic mouse models for β-subunit components of succinate-CoA ligase yielding pleiotropic metabolic alterations. Biochem J 473:3463-85.LEAK
OXPHOS
F
N
Other combinations
Isolated mitochondriaMouseHeart
Nervous system
Liver
Li 2016 J Appl Physiol (1985)2016Li C, White SH, Warren LK, Wohlgemuth SE (2016) Effects of aging on mitochondrial function in skeletal muscle of quarter horses. J Appl Physiol (1985) 121:299-311.ETS
LEAK
OXPHOS
N
NS
ROX
Permeabilized tissueHorseSkeletal muscle
Scott 2016 Thesis2016Scott KY (2016) Evaluation of cardiac mitochondrial function in the fructose-fed rat. Master's Thesis p98.LEAK
OXPHOS
ETS
F
N
S
CIV
ROX
Isolated mitochondriaRatHeart
Gilliam 2016 Am J Physiol Endocrinol Metab2016Gilliam LA, Lark DS, Reese LR, Torres MJ, Ryan TE, Lin CT, Cathey BL, Neufer PD (2016) Targeted overexpression of mitochondrial catalase protects against cancer chemotherapy-induced skeletal muscle dysfunction. Am J Physiol Endocrinol Metab 311:E293-301.LEAK
OXPHOS
F
N
NS
Other combinations
Permeabilized tissueMouseSkeletal muscle
Jang 2016 Clin Toxicol (Phila)2016Jang DH, Shofer FS, Weiss SL, Becker LB (2016) Impairment of mitochondrial respiration following ex vivo cyanide exposure in peripheral blood mononuclear cells. Clin Toxicol (Phila) 54:303-7.LEAK
ROUTINE
ETS
ROXIntact cellsHumanBlood cells
Lymphocyte
Shama 2016 Evol Appl2016Shama LNS, Mark FC, Strobel A, Lokmer A, John U, Wegner KM (2016) Transgenerational effects persist down the maternal line in marine sticklebacks: gene expression matches physiology in a warming ocean. Evol Appl 10013/epic.47323.LEAK
OXPHOS
ETS
NS
ROX
Permeabilized tissueFishesHeart
Hamilton 2016 Physiol Rep2016Hamilton DJ, Minze LJ, Kumar T, Cao TN, Lyon CJ, Geiger PC, Hsueh WA, Gupte AA (2016) Estrogen receptor alpha activation enhances mitochondrial function and systemic metabolism in high-fat-fed ovariectomized mice. Physiol Rep 4. pii: e12913.LEAK
OXPHOS
F
N
NS
Isolated mitochondriaMouseHeart
Assmann 2016 Cell Rep2016Assmann N, Dettmer K, Simbuerger JM, Broeker C, Nuernberger N, Renner K, Courtneidge H, Klootwijk ED, Duerkop A, Hall A, Kleta R, Oefner PJ, Reichold M, Reinders J (2016) Renal fanconi syndrome is caused by a mistargeting-based mitochondriopathy. Cell Rep 15:1423-9.LEAK
OXPHOS
ETS
F
N
S
NS
Other combinations
ROX
Intact cellsPigKidney
Other cell lines
Strifler 2016 PLOS ONE2016Strifler G, Tuboly E, Szél E, Kaszonyi E, Cao C, Kaszaki J, Mészáros A, Boros M, Hartmann P (2016) Inhaled methane limits the mitochondrial electron transport chain dysfunction during experimental liver ischemia-reperfusion injury. PLOS ONE 11:e0146363.LEAK
OXPHOS
N
S
CIV
NS
ROX
Homogenate
Isolated mitochondria
RatLiver
Cannon 2016 Lung2016Cannon DT, Liu J, Sakurai R, Rossiter HB, Rehan VK (2016) Impaired lung mitochondrial respiration following perinatal nicotine exposure in rats. Lung 194:325-8.LEAK
OXPHOS
ETS
N
S
CIV
NS
Permeabilized tissueRatLung;gill
Kontro 2016 Thesis2016Kontro H (2016) Mitochondrial function and sirtuin expression in hippocampus of young and old high and low-capacity runner rats. Master's Thesis p35.ETS
LEAK
OXPHOS
N
NS
ROX
S
HomogenateRatNervous system
Peruzzo 2016 Cell Cycle2016Peruzzo P, Comelli M, Di Giorgio E, Franforte E, Mavelli I, Brancolini C (2016) Transformation by different oncogenes relies on specific metabolic adaptations. Cell Cycle 15:2656-68.LEAK
ROUTINE
ETS
ROXIntact cellsMouseFibroblast
Cagnone 2016 Sci Rep2016Cagnone GL, Tsai TS, Makanji Y, Matthews P, Gould J, Bonkowski MS, Elgass KD, Wong AS, Wu LE, McKenzie M, Sinclair DA, John JC (2016) Restoration of normal embryogenesis by mitochondrial supplementation in pig oocytes exhibiting mitochondrial DNA deficiency. Sci Rep 6:23229.ETS
LEAK
OXPHOS
ROX
S
Isolated mitochondriaPigGenital
Bastow 2016 J Cell Sci2016Bastow EL, Peswani AR, Tarrant DS, Pentland DR, Chen X, Morgan A, Staniforth GL, Tullet JM, Rowe ML, Howard MJ, Tuite MF, Gourlay CW (2016) New links between SOD1 and metabolic dysfunction from a yeast model of amyotrophic lateral sclerosis. J Cell Sci 129:4118-29.ETS
LEAK
ROUTINE
ROXSaccharomyces cerevisiae
Jiroutkova 2016 JPEN J Parenter Enteral Nutr2016Jiroutková K, Krajčová A, Žiak J, Fric M, Gojda J, Džupa V, Kalous M, Tůmová J, Trnka J, Duška F (2016) Mitochondrial function in an in vitro model of skeletal muscle of patients with protracted critical illness and intensive care unit-acquired weakness. JPEN J Parenter Enteral Nutr [Epub ahead of print].LEAK
ETS
F
ROX
HumanSkeletal muscle
Other cell lines
Davuluri 2016 J Physiol2016Davuluri G, Allawy A, Thapaliya S, Rennison JH, Singh D, Kumar A, Sandlers Y, Van Wagoner DR, Flask CA, Hoppel C, Kasumov T, Dasarathy S (2016) Hyperammonaemia-induced skeletal muscle mitochondrial dysfunction results in cataplerosis and oxidative stress. J Physiol 594:7341-60.LEAK
ETS
ROXIntact cellsMouseSkeletal muscle
Distefano 2016 J Gerontol A Biol Sci Med Sci2016Distefano G, Standley RA, Dubé JJ, Carnero EA, Ritov VB, Stefanovic-Racic M, Toledo FG, Piva SR, Goodpaster BH, Coen PM (2016) Chronological age does not influence ex-vivo mitochondrial respiration and quality control in skeletal muscle. J Gerontol A Biol Sci Med Sci [Epub ahead of print].LEAK
OXPHOS
ETS
N
S
NS
Permeabilized tissueHumanSkeletal muscle
Tam 2016 Eur J Appl Physiol2016Tam E, Bruseghini P, Calabria E, Sacco LD, Doria C, Grassi B, Pietrangelo T, Pogliaghi S, Reggiani C, Salvadego D, Schena F, Toniolo L, Verratti V, Vernillo G, Capelli C (2016) Gokyo Khumbu/Ama Dablam Trek 2012: effects of physical training and high-altitude exposure on oxidative metabolism, muscle composition, and metabolic cost of walking in women. Eur J Appl Physiol 116:129-44.LEAK
OXPHOS
N
S
NS
ROX
Permeabilized tissueHumanSkeletal muscle
Lalia 2016 J Clin Endocrinol Metab2016Lalia AZ, Dasari S, Johnson ML, Robinson MM, Konopka AR, Distelmaier K, Port JD, Glavin MT, Esponda RR, Nair KS, Lanza IR (2016) Predictors of whole-body insulin sensitivity across ages and adiposity in adult humans. J Clin Endocrinol Metab 101:626-34.LEAK
OXPHOS
NSIsolated mitochondriaHumanSkeletal muscle
Sirsat 2016 J Comp Physiol B2016Sirsat SK, Sirsat TS, Crossley JL, Sotherland PR, Dzialowski EM (2016) The 12-day thermoregulatory metamorphosis of Red-winged Blackbirds (Agelaius phoeniceus). J Comp Physiol B 186:651-663.LEAK
OXPHOS
NPermeabilized tissueBirdsSkeletal muscle
Asseburg 2016 Neuromolecular Med2016Asseburg H, Schäfer C, Müller M, Hagl S, Pohland M, Berressem D, Borchiellini M, Plank C, Eckert GP (2016) Effects of grape skin extract on age-related mitochondrial dysfunction, memory and life span in C57BL/6J mice. Neuromolecular Med 18:378-95.LEAK
OXPHOS
ETS
N
S
CIV
NS
ROX
Isolated mitochondriaMouseNervous system
Scrima 2016 Biochim Biophys Acta2016Scrima R, Cela O, Merla G, Augello B, Rubino R, Quarato G, Fugetto S, Menga M, Fuhr L, Relógio A, Piccoli C, Mazzoccoli G, Capitanio N (2016) Clock-genes and mitochondrial respiratory activity: Evidence of a reciprocal interplay. Biochim Biophys Acta 1857:1344-51.LEAK
ROUTINE
ETS
ROXIntact cellsHumanLiver
Endothelial;epithelial;mesothelial cell
Other cell lines
Fibroblast
Miotto 2016 Biochem J2016Miotto PM, Holloway GP (2016) In the absence of phosphate shuttling, exercise reveals the in vivo importance of creatine-independent mitochondrial ADP transport. Biochem J 473:2831-43.LEAK
OXPHOS
N
NS
Permeabilized tissueMouseSkeletal muscle
Sirsat 2016 Biol Open2016Sirsat SK, Sirsat TS, Price ER, Dzialowski EM (2016) Post-hatching development of mitochondrial function, organ mass and metabolic rate in two ectotherms, the American alligator (Alligator mississippiensis) and the common snapping turtle (Chelydra serpentina). Biol Open 5:443-51.LEAK
OXPHOS
ETS
N
NS
Permeabilized tissueReptilesHeart
Skeletal muscle
Mezera 2016 Oxid Med Cell Longev2016Mezera V, Endlicher R, Kucera O, Sobotka O, Drahota Z, Cervinkova Z (2016) Effects of epigallocatechin gallate on tert-butyl hydroperoxide-induced mitochondrial dysfunction in rat liver mitochondria and hepatocytes. Oxid Med Cell Longev 7573131:8pp.LEAK
OXPHOS
N
S
Permeabilized cells
Isolated mitochondria
RatLiver
Ryan 2016 J Mol Cell Cardiol2016Ryan TE, Schmidt CA, Alleman RJ, Tsang AM, Green TD, Neufer PD, Brown DA, McClung JM (2016) Mitochondrial therapy improves limb perfusion and myopathy following hindlimb ischemia. J Mol Cell Cardiol 97:191-6.LEAK
OXPHOS
ETS
N
S
CIV
NS
ROX
Isolated mitochondriaMouseSkeletal muscle
Chang 2016 Transl Res2016Chang JC, Wu SL, Liu KH, Chen YH, Chuang CS, Cheng FC, Su HL, Wei YH, Kuo SJ, Liu CS (2016) Allogeneic/xenogeneic transplantation of peptide-labeled mitochondria in Parkinson's disease: restoration of mitochondria functions and attenuation of 6-hydroxydopamine-induced neurotoxicity. Transl Res 170:40-56.LEAK
OXPHOS
ETS
NIsolated mitochondriaRatNervous system
Other cell lines
Lark 2016 Am J Physiol Cell Physiol2016Lark DS, Torres MJ, Lin CT, Ryan TE, Anderson EJ, Neufer PD (2016) Direct real-time quantification of mitochondrial oxidative phosphorylation efficiency in permeabilized skeletal muscle myofibers. Am J Physiol Cell Physiol 311:C239-45.LEAK
OXPHOS
ETS
N
Gp
NS
Permeabilized tissue
Isolated mitochondria
MouseSkeletal muscle
Gregg 2016 Diabetes2016Gregg T, Poudel C, Schmidt BA, Dhillon RS, Sdao SM, Truchan NA, Baar EL, Fernandez LA, Denu JM, Eliceiri KW, Rogers JD, Kimple ME, Lamming DW, Merrins MJ (2016) Pancreatic β cells from mice offset age-associated mitochondrial deficiency with reduced KATP channel activity. Diabetes 65:2700-10.LEAK
OXPHOS
ETS
N
S
NS
ROX
Permeabilized tissueHuman
Mouse
Islet cell;pancreas;thymus
Other cell lines
Watala 2016 Int J Pharm2016Watala C, Karolczak K, Kassassir H, Siewiera K, Maczynska K, Pieniazek A, Labieniec-Watala M (2016) How do the full-generation poly(amido)amine (PAMAM) dendrimers activate blood platelets? Platelet membrane zeta potential and other membrane-associated phenomena. Int J Pharm 500:379-89.LEAK
ROUTINE
ETS
ROXIntact cellsHumanBlood cells
Platelet
MiPNet21.13 Comparison mt-preparations2016
O2k-Protocols
O2k-Protocols: Mitochondrial preparations for HRR.
LEAK
OXPHOS
ETS
N
S
NS
ROX
Permeabilized cells
Homogenate
Isolated mitochondria
MouseHeart
Jacobs 2016 J Physiol2016Jacobs RA, Lundby AM, Fenk S, Gehrig S, Siebenmann C, Flück D, Kirk N, Hilty MP, Lundby C (2016) Twenty-eight days of exposure to 3,454 m increases mitochondrial volume density in human skeletal muscle. J Physiol 594:1151-66.LEAK
OXPHOS
ETS
F
N
S
CIV
NS
ROX
Permeabilized tissueHumanSkeletal muscle
Johnson 2016 Diabetes2016Johnson ML, Distelmaier K, Lanza IR, Irving BA, Robinson MM, Konopka AR, Shulman GI, Nair KS (2016) Mechanism by which caloric restriction improves insulin sensitivity in sedentary obese adults. Diabetes 65:74-84.LEAK
OXPHOS
ETS
N
S
NS
ROX
Isolated mitochondriaHumanSkeletal muscle
Sparks 2016 Diabetologia2016Sparks LM, Gemmink A, Phielix E, Bosma M, Schaart G, Moonen-Kornips E, Jörgensen JA, Nascimento EB, Hesselink MK, Schrauwen P, Hoeks J (2016) ANT1-mediated fatty acid-induced uncoupling as a target for improving myocellular insulin sensitivity. Diabetologia 59:1030-9.LEAK
OXPHOS
ETS
F
N
NS
Other combinations
Permeabilized tissue
Isolated mitochondria
Human
Mouse
Rat
Skeletal muscle
Other cell lines
Nissinen 2016 Sci Rep2016Nissinen TA, Degerman J, Räsänen M, Poikonen AR, Koskinen S, Mervaala E, Pasternack A, Ritvos O, Kivelä R, Hulmi JJ (2016) Systemic blockade of ACVR2B ligands prevents chemotherapy-induced muscle wasting by restoring muscle protein synthesis without affecting oxidative capacity or atrogenes. Sci Rep 6:32695.LEAK
OXPHOS
ETS
F
N
S
CIV
NS
ROX
HomogenateMouseSkeletal muscle
Barth 2016 Thesis2016Barth C (2016) Effekte einer intermittierenden Hyperoxie auf die mitochondriale Atmung in Alveolarmakrophagen. Dissertation p69.LEAK
ROUTINE
OXPHOS
N
S
CIV
NS
ROX
Intact cells
Permeabilized cells
MouseLung;gill
Macrophage-derived
Fisar 2016 Folia Biol (Praha)2016Fisar Z, Hroudova J (2016) Pig brain mitochondria as a biological model for study of mitochondrial respiration. Folia Biol (Praha) 62:15-25.LEAK
OXPHOS
ETS
N
S
NS
ROX
Isolated mitochondriaPigNervous system
Van Schaardenburgh 2016 PLOS ONE2016van Schaardenburgh M, Wohlwend M, Rognmo Ø, Mattsson EJ (2016) Mitochondrial respiration after one session of calf raise exercise in patients with peripheral vascular disease and healthy older adults. PLOS ONE 11:e0165038.ETS
LEAK
OXPHOS
F
N
NS
S
Permeabilized tissueHumanSkeletal muscle
Milerova 2016 Mol Cell Biochem2016Milerová M, Drahota Z, Chytilová A, Tauchmannová K, Houštěk J, Ošťádal B (2016) Sex difference in the sensitivity of cardiac mitochondrial permeability transition pore to calcium load. Mol Cell Biochem 412:147-54.LEAK
OXPHOS
N
NS
Isolated mitochondriaRatHeart
Gariani 2016 Hepatology2016Gariani K, Menzies KJ, Ryu D, Wegner CJ, Wang X*, Ropelle ER, Moullan N, Zhang H, Perino A, Lemos V, Kim B, Park YK, Piersigilli A, Pham TX, Yang Y, Ku CS, Koo SI, Fomitchova A, Cantó C, Schoonjans K, Sauve AA, Lee JY, Auwerx J (2016) Eliciting the mitochondrial unfolded protein response by nicotinamide adenine dinucleotide repletion reverses fatty liver disease in mice. Hepatology 63:1190-204.LEAK
OXPHOS
N
S
Permeabilized tissueMouseLiver
Bal 2016 J Biol Chem2016Bal NC, Maurya SK, Singh S, Wehrens XH, Periasamy M (2016) Increased reliance on muscle based thermogenesis upon acute minimization of brown adipose tissue function. J Biol Chem 291:17247-57.LEAK
OXPHOS
N
NS
Permeabilized tissueMouseSkeletal muscle
Rackham 2016 Cell Rep2016Rackham O, Busch JD, Matic S, Siira SJ, Kuznetsova I, Atanassov I, Ermer JA, Shearwood AM, Richman TR, Stewart JB, Mourier A, Milenkovic D, Larsson NG, Filipovska A (2016) Hierarchical RNA processing is required for mitochondrial ribosome assembly. Cell Rep 16:1874-90.LEAK
OXPHOS
ETS
N
S
CIV
NS
Other combinations
Isolated mitochondriaMouseHeart
Sadhukhan 2016 Proc Natl Acad Sci U S A2016Sadhukhan S, Liu X, Ryu D, Nelson OD, Stupinski JA, Li Z, Chen W, Zhang S, Weiss RS, Locasale JW, Auwerx J, Lin H (2016) Metabolomics-assisted proteomics identifies succinylation and SIRT5 as important regulators of cardiac function. Proc Natl Acad Sci U S A 113:4320-5.LEAK
OXPHOS
F
N
Permeabilized tissueMouseHeart
Grundmanova 2016 Physiol Res2016Grundmanová M, Jarkovská D, Süß A, Tůma Z, Marková M, Grundman Z, El-Kadi A, Čedíková M, Štengl M, Kuncová J (2016) Propofol-induced mitochondrial and contractile dysfunction of the rat ventricular myocardium. Physiol Res 65:S601-9.LEAK
OXPHOS
ETS
N
S
CIV
NS
ROX
Permeabilized tissueRatHeart
Sobotka 2016 J Bioenerg Biomembr2016Sobotka O, Endlicher R, Drahota Z, Kučera O, Rychtrmoc D, Raad M, Hakeem K, Červinková Z (2016) Impaired mitochondrial functions contribute to 3-bromopyruvate toxicity in primary rat and mouse hepatocytes. J Bioenerg Biomembr 48:363-73.LEAK
OXPHOS
N
S
CIV
Intact cells
Permeabilized cells
Homogenate
Isolated mitochondria
Mouse
Rat
Liver
Amigo 2016 Aging Cell2016Amigo I, Menezes-Filho SL, Luévano-Martínez LA, Chausse B, Kowaltowski AJ (2016) Caloric restriction increases brain mitochondrial calcium retention capacity and protects against excitotoxicity. Aging Cell 16:73-81.LEAK
OXPHOS
ETS
N
S
Isolated mitochondriaNervous system
Radovic 2016 Diabetologia2016Radović B, Vujić N, Leopold C, Schlager S, Goeritzer M, Patankar JV, Korbelius M, Kolb D, Reindl J, Wegscheider M, Tomin T, Birner-Gruenberger R, Schittmayer M, Groschner L, Magnes C, Diwoky C, Frank S, Steyrer E, Du H, Graier WF, Madl T, Kratky D (2016) Lysosomal acid lipase regulates VLDL synthesis and insulin sensitivity in mice. Diabetologia 59:1743-52.LEAK
OXPHOS
ETS
N
S
NS
Isolated mitochondriaMouseLiver
Wolff 2016 J Evol Biol2016Wolff JN, Pichaud N, Camus MF, Côté G, Blier PU, Dowling DK (2016) Evolutionary implications of mitochondrial genetic variation: mitochondrial genetic effects on OXPHOS respiration and mitochondrial quantity change with age and sex in fruit flies. J Evol Biol 29:736-47.LEAK
OXPHOS
ETS
N
Gp
CIV
Other combinations
ROX
Permeabilized tissueDrosophilaSkeletal muscle
Farsijani 2016 J Clin Invest2016Farsijani NM, Liu Q, Kobayashi H, Davidoff O, Sha F, Fandrey J, Ikizler TA, O'Connor PM, Haase VH (2016) Renal epithelium regulates erythropoiesis via HIF-dependent suppression of erythropoietin. J Clin Invest 126:1425-37.LEAK
OXPHOS
N
S
CIV
ROX
Permeabilized tissueMouseNervous system
Lukasiak 2016 Eur J Pharmacol2016Łukasiak A, Skup A, Chlopicki S, Łomnicka M, Kaczara P, Proniewski B, Szewczyk A, Wrzosek A (2016) SERCA, complex I of the respiratory chain and ATP-synthase inhibition are involved in pleiotropic effects of NS1619 on endothelial cells. Eur J Pharmacol 786:137-47.LEAK
ETS
Other combinationsPermeabilized cellsHumanEndothelial;epithelial;mesothelial cell
Iglesias-Gonzalez 2016 Mol Neurobiol2016Iglesias-González J, Sánchez-Iglesias S, Beiras-Iglesias A, Méndez-Álvarez E, Soto-Otero R (2016) Effects of aluminium on rat brain mitochondria bioenergetics: an in vitro and in vivo study. Mol Neurobiol 54:563-70.LEAK
OXPHOS
ETS
N
S
NS
Isolated mitochondriaRatNervous system
Zhunussova 2016 PLOS ONE2016Zhunussova A, Vitol EA, Polyak B, Tuleukhanov S, Brooks AD, Sensenig R, Friedman G, Orynbayeva Z (2016) Mitochondria-mediated anticancer effects of non-thermal atmospheric plasma. PLOS ONE 11:e0156818.LEAK
ROUTINE
ETS
Intact cellsHumanGenital
Other cell lines
De Carvalho 2016 J Cell Biochem2016de Carvalho AK, da Silva S, Serafini E, de Souza DR, Farias HR, de Bem Silveira G, Silveira PC, de Souza CT, Portela LV, Muller AP (2016) Prior exercise training prevent hyperglycemia in STZ mice by increasing hepatic glycogen and mitochondrial function on skeletal muscle. J Cell Biochem 118:678-85.LEAK
OXPHOS
SHomogenateMouseSkeletal muscle
Liver
Ejaz 2016 Diabetes2016Ejaz A, Martinez-Guino L, Goldfine AB, Ribas-Aulinas F, De Nigris V, Ribó S, Gonzalez-Franquesa A, Garcia-Roves PM, Li E, Dreyfuss JM, Gall W, Kim JK, Bottiglieri T, Villarroya F, Gerszten RE, Patti ME, Lerin C (2016) Dietary betaine supplementation increases Fgf21 levels to improve glucose homeostasis and reduce hepatic lipid accumulation in mice. Diabetes 65:902-12.LEAK
OXPHOS
NS
Other combinations
ROX
HomogenateMouseFat
Kawalec 2016 Praca doktorska2016Kawalec MM (2016) Badanie komórkowych skutków mutacji w genie mitofuzyny 2. Próba zaproponowania testu patogenności mutacji. Praca doktorska p86.LEAK
ROUTINE
ETS
Intact cellsMouseFibroblast
Scialo 2016 PLOS ONE2016Scialo F, Sriram A, Stefanatos R, Sanz A (2016) Practical recommendations for the use of the GeneSwitch Gal4 system to knock-Down genes in Drosophila melanogaster. PLOS ONE 11:e0161817.LEAK
OXPHOS
N
CIV
Other combinations
ROX
HomogenateDrosophila
Yavari 2016 Cell Metab2016Yavari A, Stocker CJ, Ghaffari S, Wargent ET, Steeples V, Czibik G, Pinter K, Bellahcene M, Woods A, Martinez de Morentin PB, Cansell C, Lam BY, Chuster A, Petkevicius K, Nguyen-Tu MS, Martinez-Sanchez A, Pullen TJ, Oliver PL, Stockenhuber A, Nguyen C, Lazdam M, O'Dowd JF, Harikumar P, Toth M, Beall C, Kyriakou T, Parnis J, Sarma D, Katritsis G, Wortmann DD, Harper AR, Brown LA, Willows R, Gandra S, Poncio V, de Oliveira Figueiredo MJ, Qi NR, Peirson SN, McCrimmon RJ, Gereben B, Tretter L, Fekete C, Redwood C, Yeo GS, Heisler LK, Rutter GA, Smith MA, Withers DJ, Carling D, Sternick EB, Arch JR, Cawthorne MA, Watkins H, Ashrafian H (2016) Chronic activation of γ2 AMPK induces obesity and reduces β cell function. Cell Metab 23:821-36.LEAK
OXPHOS
ETS
N
NS
ROX
HomogenateMouseNervous system
Hamilton 2016 Am J Physiol Heart Circ Physiol2016Hamilton DJ, Zhang A, Li S, Cao TN, Smith JA, Vedula I, Cordero-Reyes AM, Youker KA, Torre-Amione G, Gupte AA (2016) Combination of angiotensin II and l-NG-nitroarginine methyl ester exacerbates mitochondrial dysfunction and oxidative stress to cause heart failure. Am J Physiol Heart Circ Physiol 310:H667-80.LEAK
OXPHOS
F
N
S
NS
Other combinations
ROX
Permeabilized tissue
Isolated mitochondria
MouseHeart
Pohland 2016 Neurochem Res2016Pohland M, Hagl S, Pellowska M, Wurglics M, Schubert-Zsilavecz M, Eckert GP (2016) MH84: a novel γ-secretase modulator/PPARγ agonist-improves mitochondrial dysfunction in a cellular model of Alzheimer's disease. Neurochem Res 41:231-42.LEAK
OXPHOS
ETS
N
S
CIV
NS
ROX
Permeabilized cellsHumanKidney
HEK
Cecatto 2016 Thesis2016Cecatto C (2016) Efeitos de acidos graxos hidroxilados de cadeia longa acumulados nas deficiencias da 3-hidroxiacil CoA desidrogenase de cadeia longa e da proteina trifunctional mitocondrial sobre a homeostase energetica mitochondrial nos musculos cardiaco e esqueletico de ratos jovens. Dissertation p103.LEAK
OXPHOS
ETS
NPermeabilized tissue
Isolated mitochondria
RatHeart
Skeletal muscle
Amaral 2016 J Neurochem2016Amaral AU, Cecatto C, Castilho RF, Wajner M (2016) 2-methylcitric acid impairs glutamate metabolism and induces permeability transition in brain mitochondria. J Neurochem 137:62-75.LEAK
OXPHOS
ETS
N
S
NS
Isolated mitochondriaRatNervous system
Salin 2016 J Exp Biol2016Salin K, Auer SK, Anderson GJ, Selman C, Metcalfe NB (2016) Inadequate food intake at high temperatures is related to depressed mitochondrial respiratory capacity. J Exp Biol 219:1356-62.LEAK
OXPHOS
N
S
CIV
NS
Other combinations
ROX
Permeabilized tissueFishesSkeletal muscle
Liver
Heimer 2016 Am J Hum Genet2016Heimer G, Kerätär JM, Riley LG, Balasubramaniam S, Eyal E, Pietikäinen LP, Hiltunen JK, Marek-Yagel D, Hamada J, Gregory A, Rogers C, Hogarth P, Nance MA, Shalva N, Veber A, Tzadok M, Nissenkorn A, Tonduti D, Renaldo F, Kraoua I, Panteghini C, Valletta L, Garavaglia B, Cowley MJ, Gayevskiy V, Roscioli T, Silberstein JM, Hoffmann C, Raas-Rothschild A, Tiranti V, Anikster Y, Christodoulou J, Kastaniotis AJ, Ben-Zeev B, Hayflick SJ (2016) MECR mutations cause childhood-onset dystonia and optic atrophy, a mitochondrial fatty acid synthesis disorder. Am J Hum Genet 99:1229-44.LEAK
ROUTINE
ETS
ROXIntact cellsHuman
Baris 2016 Am J Physiol Regul Integr Comp Physiol2016Baris TZ, Blier PU, Pichaud N, Crawford DL, Oleksiak MF (2016) Gene by environmental interactions affecting oxidative phosphorylation and thermal sensitivity. Am J Physiol Regul Integr Comp Physiol 311:R157-65.LEAK
OXPHOS
ETS
CIV
NS
ROX
Permeabilized tissueFishesHeart
Richman 2016 Nat Commun2016Richman TR, Spåhr H, Ermer JA, Davies SM, Viola HM, Bates KA, Papadimitriou J, Hool LC, Rodger J, Larsson NG, Rackham O, Filipovska A (2016) Loss of the RNA-binding protein TACO1 causes late-onset mitochondrial dysfunction in mice. Nat Commun 7:11884.LEAK
OXPHOS
N
S
CIV
Isolated mitochondriaMouseHeart
Liver
McFarlane 2016 Thesis2016McFarlane SV (2016) Temperature-dependent alterations of brown adipose tissue metabolism during hibernation in the thirteen-lined ground squirrel, Ictidomys tridecemlineatus. Dissertation p74.LEAK
OXPHOS
ROUTINE
F
N
Intact cells
Isolated mitochondria
Other mammalsFat
Snook 2016 Am J Physiol Regul Integr Comp Physiol2016Snook LA, MacPherson RE, Monaco CM, Frendo-Cumbo S, Castellani L, Peppler WT, Anderson ZG, Buzelle SL, LeBlanc PJ, Holloway GP, Wright DC (2016) Prior exercise training blunts short term highfat diet induced weight gain. Am J Physiol Regul Integr Comp Physiol 311:R315-24.LEAK
OXPHOS
ETS
N
NS
Permeabilized tissueMouseFat
Reijne 2016 PLOS ONE2016Reijne AC, Ciapaite J, van Dijk TH, Havinga R, van der Zee EA, Groen AK, Reijngoud DJ, Bakker BM, van Dijk G (2016) Whole-body vibration partially reverses aging-induced increases in visceral adiposity and hepatic lipid storage in mice. PLOS ONE 11:e0149419.LEAK
OXPHOS
F
N
Other combinations
Isolated mitochondriaMouseSkeletal muscle
Liver
Salin 2016 Physiol Biochem Zool2016Salin K, Auer SK, Rudolf AM, Anderson GJ, Selman C, Metcalfe NB (2016) Variation in metabolic rate among individuals is related to tissue-specific differences in mitochondrial LEAK respiration. Physiol Biochem Zool 89:511-23.LEAK
OXPHOS
N
CIV
NS
ROX
HomogenateSkeletal muscle
Liver
Bernardo 2015 J Nutr Biochem2016Bernardo AF, Cortez E, Neves FA, Vieira AKG, Soares V, Rodrigues-Cunha AC, Andrade DC, Thole AA, Gabriel-Costa D, Brum PC, Moura AS, Garcia-Souza EP (2015) Overnutrition during lactation leads to impairment in insulin signaling, upregulation of GLUT1 and increased mitochondrial carbohydrate oxidation in heart of weaned mice. J Nutr Biochem 29:124-32.LEAK
OXPHOS
F
N
NS
Permeabilized tissueMouseHeart
Christensen 2016 J Appl Physiol (1985)2016Christensen PM, Jacobs RA, Bonne T, Flück D, Bangsbo J, Lundby C (2016) A short period of high-intensity interval training improves skeletal muscle mitochondrial function and pulmonary oxygen uptake kinetics. J Appl Physiol (1985) 120:1319-27.LEAK
OXPHOS
ETS
F
N
S
CIV
NS
Other combinations
ROX
Permeabilized tissueHumanSkeletal muscle
Szczepanowska 2016 EMBO J2016Szczepanowska K, Maiti P, Kukat A, Hofsetz E, Nolte H, Senft K, Becker C, Ruzzenente B, Hornig-Do HT, Wibom R, Wiesner RJ, Krüger M, Trifunovic A (2016) CLPP coordinates mitoribosomal assembly through the regulation of ERAL1 levels. EMBO J 35:2566-83.LEAK
OXPHOS
ETS
N
NS
Isolated mitochondriaMouseHeart
Barison 2016 J Bioenerg Biomembr2016Barisón MJ, Damasceno FS, Mantilla BS, Silber AM (2016) The active transport of histidine and its role in ATP production in Trypanosoma cruzi. J Bioenerg Biomembr 48:437-49.LEAK
ROUTINE
ETS
Intact cellsProtists
Gehrig 2016 Orphanet J Rare Dis2016Gehrig SM, Mihaylova V, Frese S, Mueller SM, Ligon-Auer M, Spengler CM, Petersen JA, Lundby C, Jung HH (2016) Altered skeletal muscle (mitochondrial) properties in patients with mitochondrial DNA single deletion myopath. Orphanet J Rare Dis 11:105.LEAK
OXPHOS
F
N
S
CIV
NS
Other combinations
ROX
Permeabilized tissueHumanSkeletal muscle
Briston 2016 Sci Rep2016Briston T, Lewis S, Koglin M, Mistry K, Shen Y, Hartopp N, Katsumata R, Fukumoto H, Duchen MR, Szabadkai G, Staddon JM, Roberts M, Powney B (2016) Identification of ER-000444793, a Cyclophilin D-independent inhibitor of mitochondrial permeability transition, using a high-throughput screen in cryopreserved mitochondria. Sci Rep 6:37798.LEAK
OXPHOS
ETS
N
S
ROX
Isolated mitochondriaRatLiver
Van Zutphen 2016 J Hepatol2016van Zutphen T, Ciapaite J, Bloks VW, Ackereley C, Gerding A, Jurdzinski A, Allgayer de Moraes R, Zhang L, Wolters JC, Bischoff R, Wanders RJ, Houten SM, Bronte-Tinkew D, Shatseva T, Lewis GF, Groen AK, Reijngoud DJ, Bakker BM, Jonker JW, Kim PK, Bandsma RH (2016) Malnutrition-associated liver steatosis and ATP depletion is caused by peroxisomal and mitochondrial dysfunction. J Hepatol 65:1198-1208.ETS
LEAK
OXPHOS
F
N
NS
Other combinations
Isolated mitochondriaRatLiver
Doerrier 2016 Mitochondrion2016Doerrier C, García JA, Volt H, Díaz-Casado ME, Luna-Sánchez M, Fernández-Gil B, Escames G, López LC, Acuña-Castroviejo D (2016) Permeabilized myocardial fibers as model to detect mitochondrial dysfunction during sepsis and melatonin effects without disruption of mitochondrial network. Mitochondrion 27:56-63.LEAK
OXPHOS
ETS
N
S
NS
ROX
Permeabilized tissueMouseHeart
Granata 2016 FASEB J2016Granata C, Oliveira RS, Little JP, Renner K, Bishop DJ (2016) Mitochondrial adaptations to high-volume exercise training are rapidly reversed after a reduction in training volume in human skeletal muscle. FASEB J 30:3413-23.LEAK
OXPHOS
ETS
N
S
CIV
NS
ROX
Permeabilized tissueHumanSkeletal muscle
Scialo 2016 Cell Metab2016Scialò F, Sriram A, Fernández-Ayala D, Gubina N, Lõhmus M, Nelson G, Logan A, Cooper HM, Navas P, Enríquez JA, Murphy MP, Sanz A (2016) Mitochondrial ROS produced via reverse electron transport extend animal lifespan. Cell Metab 23:725-34.LEAK
OXPHOS
N
Gp
CIV
Other combinations
ROX
HomogenateDrosophila
Kancirova 2016 Physiol Res2016Kancirová I, Jašová M, Muráriková M, Sumbalová Z, Uličná O, Ravingerová T, Waczulíková I, Ziegelhöffer A, Ferko M (2016) Cardioprotection induced by remote ischemic preconditioning preserves the mitochondrial respiratory function in acute diabetic myocardium. Physiol Res 65:S611-19.LEAK
OXPHOS
F
N
Isolated mitochondriaRatHeart
Chen 2016 Nat Chem Biol2016Chen YJ, Mahieu NG, Huang X, Singh M, Crawford PA, Johnson SL, Gross RW, Schaefer J, Patti GJ (2016) Lactate metabolism is associated with mammalian mitochondria. Nat Chem Biol 12:937-43.LEAK
OXPHOS
ETS
N
NS
ROX
Isolated mitochondriaHumanHeLa
Seiferling 2016 EMBO Rep2016Seiferling D, Szczepanowska K, Becker C, Senft K, Hermans S, Maiti P, König T, Kukat A, Trifunovic A (2016) Loss of CLPP alleviates mitochondrial cardiomyopathy without affecting the mammalian UPRmt. EMBO Rep 17:953-64.LEAK
OXPHOS
ETS
N
NS
Isolated mitochondriaMouseHeart
Soendergaard 2016 Eur J Sport Sci2016Søndergård SD, Dela F, Helge JW, Larsen S (2016) Actovegin, a non-prohibited drug increases oxidative capacity in human skeletal muscle. Eur J Sport Sci 16:801-7.LEAK
OXPHOS
ETS
N
NS
Permeabilized tissueHumanSkeletal muscle
Wang 2016 Toxicol Sci2016Wang L, Espinoza HM, MacDonald JW, Bammler TK, Williams CR, Yeh A, Louie KW, Marcinek DJ, Gallagher EP (2016) Olfactory Transcriptional Analysis of Salmon Exposed to Mixtures of Chlorpyrifos and Malathion Reveal Novel Molecular Pathways of Neurobehavioral Injury. Toxicol Sci 149:145-57.ETS
LEAK
OXPHOS
CIV
N
NS
ROX
S
Permeabilized tissueFishesEndothelial;epithelial;mesothelial cell
Tretter 2016 Biochim Biophys Acta2016Tretter L, Patocs A, Chinopoulos C (2016) Succinate, an intermediate in metabolism, signal transduction, ROS, hypoxia, and tumorigenesis. Biochim Biophys Acta 1857:1086-101.LEAK
OXPHOS
N
S
NS
Amaral 2016 Biochim Biophys Acta2016Amaral AU, Cecatto C, da Silva JC, Wajner A, Godoy KD, Ribeiro RT, Wajner M (2016) cis-4-Decenoic and decanoic acids impair mitochondrial energy, redox and Ca2+ homeostasis and induce mitochondrial permeability transition pore opening in rat brain and liver: Possible implications for the pathogenesis of MCAD deficiency. Biochim Biophys Acta 1857:1363-72.LEAK
OXPHOS
ETS
NPermeabilized cells
Isolated mitochondria
RatNervous system
Liver
Morton 2016 Nat Med2016Morton NM, Beltram J, Carter RN, Michailidou Z, Gorjanc G, McFadden C, Barrios-Llerena ME, Rodriguez-Cuenca S, Gibbins MT, Aird RE, Moreno-Navarrete JM, Munger SC, Svenson KL, Gastaldello A, Ramage L, Naredo G, Zeyda M, Wang ZV, Howie AF, Saari A, Sipilä P, Stulnig TM, Gudnason V, Kenyon CJ, Seckl JR, Walker BR, Webster SP, Dunbar DR, Churchill GA, Vidal-Puig A, Fernandez-Real JM, Emilsson V, Horvat S (2016) Genetic identification of thiosulfate sulfurtransferase as an adipocyte-expressed antidiabetic target in mice selected for leanness. Nat Med 22:771-9.LEAK
OXPHOS
N
S
Isolated mitochondriaMouseLiver
Tsai 2016 Sci Rep2016Tsai HH, Chang SC, Chou CH, Weng TP, Hsu CC, Wang JS (2016) Exercise training alleviates hypoxia-induced mitochondrial dysfunction in the lymphocytes of sedentary males. Sci Rep 6:35170.LEAK
ROUTINE
OXPHOS
ETS
F
N
S
NS
Other combinations
ROX
Intact cells
Permeabilized cells
HumanLymphocyte
Bareth 2016 Mol Biol Cell2016Bareth B, Nikolov M, Lorenzi I, Hildenbeutel M, Mick DU, Helbig C, Urlaub Z, Ott M, Rehling P, Dennerlein S (2016) Oms1 associates with cytochrome c oxidase assembly intermediates to stabilize newly synthesized Cox1. Mol Biol Cell 27:1570-80.LEAK
OXPHOS
Isolated mitochondriaSaccharomyces cerevisiae
Van Hoose 2016 J Nutr Biochem2016Van Hoose PM, Kelm NQ, Piell KM, Cole MP (2016) Conjugated linoleic acid and nitrite attenuate mitochondrial dysfunction during myocardial ischemia. J Nutr Biochem 34:8-16.LEAK
OXPHOS
ETS
N
ROX
Isolated mitochondriaMouseHeart
Pesta 2016 FASEB J2016Pesta DH, Tsirigotis DN, Befroy DE, Caballero D, Jurczak MJ, Rahimi Y, Cline GW, Dufour S, Birkenfeld AL, Rothman DL, Carpenter TO, Insogna K, Petersen KF, Bergwitz C, Shulman GI (2016) Hypophosphatemia promotes lower rates of muscle ATP synthesis. FASEB J 30:3378-87.LEAK
OXPHOS
NIsolated mitochondriaMouseSkeletal muscle
Smith 2016 Diabetes2016Smith BK, Ford RJ, Desjardins EM, Green AE, Hughes MC, Houde VP, Day EA, Marcinko K, Crane JD, Mottillo EP, Perry CG, Kemp BE, Tarnopolsky MA, Steinberg GR (2016) Salsalate (Salicylate) uncouples mitochondria, improves glucose homeostasis, and reduces liver lipids independent of AMPK β1. Diabetes 65:3352-61.ETS
LEAK
OXPHOS
F
N
NS
Other combinations
ROX
Isolated mitochondria
Permeabilized cells
MouseFat
Liver
Skeletal muscle
Morad 2016 J Lipid Res2016Morad SA, Ryan TE, Neufer PD, Zeczycki TN, Davis TS, MacDougall MR, Fox TE, Tan SF, Feith DJ, Loughran TP Jr, Kester M, Claxton DF, Barth BM, Deering TG, Cabot MC (2016) Ceramide-tamoxifen regimen targets bioenergetic elements in acute myelogenous leukemia. J Lipid Res 57:1231-42.LEAK
OXPHOS
N
S
NS
Permeabilized cellsHumanBlood cells
Other cell lines
Vinnakota 2016a Biophys J2016Vinnakota KC, Bazil JN, Van den Bergh F, Wiseman RW, Beard DA (2016) Feedback regulation and time hierarchy of oxidative phosphorylation in cardiac mitochondria. Biophys J 110:972-80.LEAK
OXPHOS
NIsolated mitochondriaRatHeart
Silva Ramos 2016 Biochim Biophys Acta2016Silva Ramos E, Larsson NG, Mourier A (2016) Bioenergetic roles of mitochondrial fusion. Biochim Biophys Acta 1857:1277-83.LEAK
OXPHOS
ETS
S
Gp
Permeabilized cellsMouseFibroblast
Cecatto 2016 Toxicol In Vitro2016Cecatto C, Godoy KD, da Silva JC, Amaral AU, Wajner M (2016) Disturbance of mitochondrial functions provoked by the major long-chain 3-hydroxylated fatty acids accumulating in MTP and LCHAD deficiencies in skeletal muscle. Toxicol In Vitro 36:1-9.LEAK
OXPHOS
ETS
NPermeabilized tissue
Isolated mitochondria
RatHeart
Skeletal muscle
Lores-Arnaiz 2016 Neurochem Res2016Lores-Arnaiz S, Lombardi P, Karadayian AG, Orgambide F, Cicerchia D, Bustamante J (2016) Brain cortex mitochondrial bioenergetics in synaptosomes and non-synaptic mitochondria during aging. Neurochem Res 41:353-63.LEAK
ROUTINE
OXPHOS
ETS
N
S
Intact cells
Isolated mitochondria
MouseNervous system
Lashbrook 2016 Thesis2016Lashbrook M (2016) Functional responses of cardiac and skeletal muscle mitochondria to short-term obesity: are all obesities the same? Master's Thesis 63pp.LEAK
OXPHOS
F
N
NS
Permeabilized tissue
Isolated mitochondria
Mouse
Other mammals
Heart
Skeletal muscle
Lesage 2016 Am J Hum Genet2016Lesage S, Drouet V, Majounie E, Deramecourt V, Jacoupy M, Nicolas A, Cormier-Dequaire F, Hassoun SM, Pujol C, Ciura S, Erpapazoglou Z, Usenko T, Maurage CA, Sahbatou M, Liebau S, Ding J, Bilgic B, Emre M, Erginel-Unaltuna N, Guven G, Tison F, Tranchant C, Vidailhet M, Corvol JC, Krack P, Leutenegger AL, Nalls MA, Hernandez DG, Heutink P, Gibbs JR, Hardy J, Wood NW, Gasser T, Durr A, Deleuze JF, Tazir M, Destée A, Lohmann E, Kabashi E, Singleton A, Corti O, Brice A (2016) Loss of VPS13C function in autosomal-recessive parkinsonism causes mitochondrial dysfunction and increases PINK1/Parkin-Dependent Mitophagy. Am J Hum Genet 98:500-13.LEAK
ROUTINE
ETS
ROXIntact cellsOther mammalsKidney
Other cell lines
Chorner 2016 Am J Physiol Regul Integr Comp Physiol2016Chorner Z, Barbeau PA, Castellani L, Wright DC, Chabowski A, Holloway GP (2016) Dietary α-linolenic acid supplementation alters skeletal muscle plasma membrane lipid composition, sarcolemmal FAT/CD36 abundance, and palmitate transport rates. Am J Physiol Regul Integr Comp Physiol 311:R1234-42.LEAK
OXPHOS
F
N
NS
Isolated mitochondriaRatSkeletal muscle
Karlsson 2016 Shock2016Karlsson M, Hara N, Morata S, Sjövall F, Kilbaugh T, Hansson MJ, Uchino H, Elmér E (2016) Diverse and tissue-specific mitochondrial respiratory response in a mouse model of sepsis-induced multiple organ failure. Shock 45:404-10.LEAK
OXPHOS
ETS
N
S
CIV
NS
HomogenateMouseNervous system
Liver
Osiki 2016 FASEB J2016Osiki PO, Ojuka E, Marmaan G (2016) An investigation of the suitability of using octanoylcarnitine together with malate as a substrate combination for assessing Beta-oxidation using High Resolution Respirometry. FASEB J 30: 1015.12 .LEAK
OXPHOS
ETS
FPermeabilized tissueRatSkeletal muscle
Moll 2016 bioRxiv2016Moll CWI, Lindtner RA, Vogel GF, Brunner M, Gutleben K, Blauth M, Krumschnabel G, Ebner HL (2016) Bone marrow mesenchymal stem cells from osteoporotic patients do not show altered mitochondrial energetics or ultrastructure. bioRxiv doi.org/10.1101/046300.LEAK
ROUTINE
OXPHOS
ETS
N
S
ROX
Intact cells
Permeabilized cells
HumanStem cells
Gomez 2016 Thesis2016Gomez CR (2016) Mitochondrial responses to anoxia exposure in red eared sliders (Trachemys scripta). Master's Thesis p102.LEAK
OXPHOS
ETS
SPermeabilized cells
Isolated mitochondria
ReptilesHeart
Nervous system
Berschneider 2016 Thesis2016Berschneider K (2016) Connecting the functions of the proteasome and mitochondria in the lung. Dissertation p161.LEAK
ETS
ROXPermeabilized cellsHuman
Mouse
Lung;gill
Endothelial;epithelial;mesothelial cell
Fibroblast
Piwonska 2016 Acta Neurobiol Exp (Wars)2016Piwońska M, Szewczyk A, Schröder UH, Reymann KG, Bednarczyk P (2016) Effectors of large-conductance calcium-activated potassium channel modulate glutamate excitotoxicity in organotypic hippocampal slice cultures. Acta Neurobiol Exp (Wars) 76:20-31.LEAK
OXPHOS
NIsolated mitochondriaRatNervous system
Krischek 2016 Mol Reprod Dev2016Krischek C, Janisch S, Naraballobh W, Brunner R, Wimmers K, Wicke M (2016) Altered incubation temperatures between embryonic Days 7 and 13 influence the weights and the mitochondrial respiratory and enzyme activities in breast and leg muscles of broiler embryos. Mol Reprod Dev 83:71-8.LEAK
OXPHOS
N
S
Permeabilized tissueChickenSkeletal muscle
Du 2016 J Exp Biol2016Du SN, Mahalingam S, Borowiec BG, Scott GR (2016) Mitochondrial physiology and reactive oxygen species production are altered by hypoxia acclimation in killifish (Fundulus heteroclitus). J Exp Biol 219:1130-8.LEAK
OXPHOS
ETS
N
S
CIV
NS
Isolated mitochondriaFishesLiver
Khattar 2016 J Neurosci Methods2016Khattar NK, Yablonska S, Baranov SV, Baranova OV, Kretz ES, Larkin TM, Carlisle DL, Richardson RM, Friedlander RM (2016) Isolation of functionally active and highly purified neuronal mitochondria from human cortex. J Neurosci Methods 263:1-6.ETS
LEAK
OXPHOS
N
NS
Isolated mitochondriaHumanNervous system
Holandino 2016 Bioelectrochemistry2016Holandino C, Teixeira CA, de Oliveira FA, Barbosa GM, Siqueira CM, Messeder DJ, de Aguiar FS, da Veiga VF, Girard-Dias W, Miranda K, Galina A, Capella MA, Morales MM (2016) Direct electric current treatment modifies mitochondrial function and lipid body content in the A549 cancer cell line. Bioelectrochemistry 111:83-92.LEAK
ROUTINE
ETS
ROXIntact cellsHumanLung;gill
Other cell lines
Moore 2016 Cryobiology2016Moore DS, Hand SC (2016) Cryopreservation of lipid bilayers by LEA proteins from Artemia franciscana and trehalose. Cryobiology 73:240-7.LEAK
OXPHOS
ETS
SIsolated mitochondriaRatLiver
Loureiro 2016 Oxid Med Cell Longev2016Loureiro AC, do Rêgo-Monteiro IC, Louzada RA, Ortenzi VH, de Aguiar AP, de Abreu ES, Cavalcanti-de-Albuquerque JP, Hecht F, de Oliveira AC, Ceccatto VM, Fortunato RS, Carvalho DP (2016) Differential expression of NADPH oxidases depends on skeletal muscle fiber type in rats. Oxid Med Cell Longev 2016:6738701.LEAK
OXPHOS
N
CIV
NS
Permeabilized tissueRatSkeletal muscle
Wuest 2016 Cardiovasc Res2016Wüst RC, de Vries HJ, Wintjes LT, Rodenburg RJ, Niessen HW, Stienen GJ (2016) Mitochondrial complex I dysfunction and altered NAD(P)H kinetics in rat myocardium in cardiac right ventricular hypertrophy and failure. Cardiovasc Res 111:362-72.LEAK
OXPHOS
N
S
Intact cells
Permeabilized tissue
RatHeart
Li 2016 Sci Rep2016Li N, Guenancia C, Rigal E, Hachet O, Chollet P, Desmoulins L, Leloup C, Rochette L, Vergely C (2016) Short-term moderate diet restriction in adulthood can reverse oxidative, cardiovascular and metabolic alterations induced by postnatal overfeeding in mice. Sci Rep 6:30817LEAK
OXPHOS
N
NS
ROX
Permeabilized tissueMouseHeart
Timpani 2016 Neurotherapeutics2016Timpani CA, Trewin AJ, Stojanovska V, Robinson A, Goodman CA, Nurgali K, Betik AC, Stepto N, Hayes A, McConell GK, Rybalka E (2016) Attempting to compensate for reduced neuronal nitric oxide synthase protein with nitrate supplementation cannot overcome metabolic dysfunction but rather has detrimental effects in Dystrophin-deficient mdx muscle. Neurotherapeutics [Epub ahead of print].LEAK
OXPHOS
ETS
N
CIV
NS
Other combinations
ROX
Permeabilized tissueMouseSkeletal muscle
Camacho-Pereira 2016 Cell Metab2016Camacho-Pereira J, Tarragó MG, Chini CC, Nin V, Escande C, Warner GM, Puranik AS, Schoon RA, Reid JM, Galina A, Chini EN (2016) CD38 dictates age-related NAD decline and mitochondrial dysfunction through an SIRT3-dependent mechanism. Cell Metab 23:1127-39.ETS
LEAK
OXPHOS
ROUTINE
ROX
S
Intact cells
Isolated mitochondria
Human
Mouse
Liver
Lung;gill
Other cell lines
Liu 2016 EMBO Mol Med2016Liu J, Liang X, Zhou D, Lai L, Xiao L, Liu L, Fu T, Kong Y, Zhou Q, Vega RB, Zhu MS, Kelly DP, Gao X, Gan Z (2016) Coupling of mitochondrial function and skeletal muscle fiber type by a miR-499/Fnip1/AMPK circuit. EMBO Mol Med 8:1212-1228.LEAK
OXPHOS
ETS
N
ROX
Permeabilized cells
Permeabilized tissue
MouseSkeletal muscle
Tunholi 2016 J Invertebr Pathol2016Tunholi VM, Tunholi-Alves VM, Santos AT, Garcia Jda S, Maldonado A Jr, da-Silva WS, Rodrigues Mde L, Pinheiro J (2016) Evaluation of the mitochondrial system in the gonad-digestive gland complex of Biomphalaria glabrata (Mollusca, Gastropoda) after infection by Echinostoma paraensei (Trematoda, Echinostomatidae). J Invertebr Pathol 136:136-41.LEAK
OXPHOS
ETS
N
NS
ROX
Permeabilized tissueMolluscsGenital
Baeder 2016 Int J Dent2016Baeder AC, Napa K, Richardson ST, Taylor OJ, Andersen SG, Wilcox SH, Winden DR, Reynolds PR, Bikman BT (2016) Oral gingival cell cigarette smoke exposure induces muscle cell metabolic disruption. Int J Dent 2016:2763160.LEAK
OXPHOS
ETS
N
NS
ROX
Permeabilized cellsMouseSkeletal muscle
Du 2016 Thesis2016Du X (2016) Anthropogenic pollution effects on mitochondrial energy metabolism, gene expression, and genotypes of natural Fundulus heteroclitus populations. Dissertation p175.LEAK
ROUTINE
OXPHOS
ETS
S
CIV
Other combinations
ROX
FishesLiver
Siewiera 2016 Life Sci2016Siewiera K, Kassassir H, Talar M, Wieteska L, Watala C (2016) Higher mitochondrial potential and elevated mitochondrial respiration are associated with excessive activation of blood platelets in diabetic rats. Life Sci 148:293-304.LEAK
ROUTINE
ETS
ROXIntact cellsRatBlood cells
Platelet
Keller 2016 Oxid Med Cell Longev2016Keller AC, Knaub LA, McClatchey PM, Connon CA, Bouchard R, Miller MW, Geary KE, Walker LA, Klemm DJ, Reusch JE (2016) Differential mitochondrial adaptation in primary vascular smooth muscle cells from a diabetic rat model. Oxid Med Cell Longev 2016:8524267.LEAK
OXPHOS
ETS
N
NS
Permeabilized cellsRatEndothelial;epithelial;mesothelial cell
Liu 2016 J Biol Chem2016Liu J, Liang X, Zhou D, Lai L, Xiao L, Liu L, Fu T, Kong Y, Zhou Q, Vega RB, Zhu MS, Kelly DP, Gao X, Gan Z (2016) Exercise inducible lactate dehydrogenase B regulates mitochondrial function in skeletal muscle. J Biol Chem 291:25306-18LEAK
OXPHOS
NPermeabilized tissueMouseSkeletal muscle
Peyta 2016 Biochim Biophys Acta2016Peyta L, Jarnouen K, Pinault M, Guimaraes C, Pais de Barros JP, Chevalier S, Dumas JF, Maillot F, Hatch GM, Loyer P, Servais S (2016) Reduced cardiolipin content decreases respiratory chain capacities and increases ATP synthesis yield in the human HepaRG cells. Biochim Biophys Acta 1857:443-53.LEAK
OXPHOS
ETS
N
CIV
NS
ROX
Permeabilized cellsHumanLiver
Other cell lines
Jang 2016 J Intensive Care Med2016Jang DH, Greenwood JC, Spyres MB, Eckmann D (2016) Measurement of mitochondrial respiration and motility in acute care: sepsis, trauma, and poisoning. J Intensive Care Med 32:86-94.LEAK
ROUTINE
ETS
ROXIntact cellsBlood cells
Lymphocyte
Kilbaugh 2016 Mitochondrion2016Kilbaugh TJ, Karlsson M, Duhaime AC, Hansson MJ, Elmer E, Margulies SS (2016) Mitochondrial response in a toddler-aged swine model following diffuse non-impact traumatic brain injury. Mitochondrion 26:19-25.LEAK
OXPHOS
ETS
N
S
CIV
NS
ROX
HomogenatePigNervous system
Lund 2016 J Physiol2016Lund MT, Kristensen M, Hansen M, Tveskov L, Floyd AK, Støckel M, Vainer B, Poulsen SS, Helge JW, Prats C, Dela F (2016) Hepatic mitochondrial oxidative phosphorylation is normal in obese patients with and without type 2 diabetes. J Physiol 594:4351-8.LEAK
OXPHOS
ETS
F
N
S
CIV
NS
ROX
Permeabilized tissueHumanLiver
Drehmer 2016 Stem Cell Res2016Drehmer DL, de Aguiar AM, Brandt AP, Petiz L, Cadena SM, Rebelatto CK, Brofman PR, Filipak Neto F, Dallagiovanna B, Abud AP (2016) Metabolic switches during the first steps of adipogenic stem cells differentiation. Stem Cell Res 17:413-421.LEAK
ROUTINE
ETS
ROXHumanFat
Stem cells
Munro 2016 Free Radic Biol Med2016Munro D, Banh S, Sotiri E, Tamanna N, Treberg JR (2016) The thioredoxin and glutathione-dependent H2O2 consumption pathways in muscle mitochondria: Involvement in H2O2 metabolism and consequence to H2O2 efflux assays. Free Radic Biol Med 96:334-46.LEAK
OXPHOS
N
S
Isolated mitochondriaRatSkeletal muscle
Puskarich 2016 J Crit Care2016Puskarich MA, Kline JA, Watts JA, Shirey K, Hosler J, Jones AE (2016) Early alterations in platelet mitochondrial function are associated with survival and organ failure in patients with septic shock. J Crit Care 31:63-7.LEAK
ROUTINE
ETS
ROXIntact cellsHumanBlood cells
Platelet
Leucci 2016 Nature2016Leucci E, Vendramin R, Spinazzi M, Laurette P, Fiers M, Wouters J, Radaelli E, Eyckerman S, Leonelli C, Vanderheyden K, Rogiers A, Hermans E, Baatsen P, Aerts S, Amant F, Van Aelst S, van den Oord J, de Strooper B, Davidson I, Lafontaine DL, Gevaert K, Vandesompele J, Mestdagh P, Marine JC (2016) Melanoma addiction to the long non-coding RNA SAMMSON. Nature 531:518-22.LEAK
OXPHOS
ETS
N
CIV
NS
ROX
Permeabilized cellsHumanEndothelial;epithelial;mesothelial cell
Other cell lines
Sheremet 2016 Biochemistry (Moscow)2016Sheremet NL, Nevinitsyna TA, Zhorzholadze NV, Ronzina IA, Itkis YS, Krylova TD, Tsygankova PG, Malakhova VA, Zakharova EY, Tokarchuk AV, Panteleeva AA, Karger EM, Lyamzaev KG, Avetisov SE (2016) Previously unclassified mutation of mtDNA m.3472T>C: evidence of pathogenicity in Leber’s hereditary optic neuropathy. Biochemistry (Moscow) BM16-078.LEAK
ROUTINE
OXPHOS
ETS
N
S
NS
ROX
Intact cells
Permeabilized cells
HumanEndothelial;epithelial;mesothelial cell
Fibroblast
Platelet
Vevera 2016 Physiol Res2016Vevera J, Fišar Z, Nekovářová T, Vrablík M, Zlatohlávek L, Hroudová J, Singh N, Raboch J, Valeš K (2016) Statin-induced changes in mitochondrial respiration in blood platelets in rats and human with dyslipidemia. Physiol Res 65:777-88.LEAK
ROUTINE
OXPHOS
ETS
N
S
NS
Other combinations
ROX
Intact cells
Permeabilized cells
Human
Rat
Blood cells
Platelet
Alleman 2016 Am J Physiol Heart Circ Physiol2016Alleman RJ, Tsang AM, Ryan TE, Patteson DJ, McClung JM, Spangenburg EE, Shaikh SR, Neufer PD, Brown DA (2016) Exercise-induced protection against reperfusion arrhythmia involves stabilization of mitochondrial energetics. Am J Physiol Heart Circ Physiol 310:H1360-70.LEAK
OXPHOS
N
NS
Isolated mitochondriaRatHeart
Sengupta 2016 Free Radic Biol Med2016Sengupta S, Yang G, O'Donnell JC, Hinson MD, McCormack SE, Falk MJ, La P, Robinson MB, Williams ML, Yohannes MT, Polyak E, Nakamaru-Ogiso E, Dennery PA (2016) The circadian gene Rev-erbα improves cellular bioenergetics and provides preconditioning for protection against oxidative stress. Free Radic Biol Med 93:177-89.LEAK
ROUTINE
ETS
ROXIntact cellsMouseLung;gill
Fibroblast
Xiong 2016 Hypertension2016Xiong S, Wang P, Ma L, Gao P, Gong L, Li L, Li Q, Sun F, Zhou X, He H, Chen J, Yan Z, Liu D, Zhu Z (2016) Ameliorating endothelial mitochondrial dysfunction restores coronary function via transient receptor potential vanilloid 1-mediated protein kinase A/uncoupling protein 2 pathway. Hypertension 67:451-60.LEAK
ROUTINE
OXPHOS
ETS
N
S
NS
ROX
Intact cells
Permeabilized cells
HumanEndothelial;epithelial;mesothelial cell
Other cell lines
Thomas 2016 Neurodegeneration Therapeutics2016Thomas RR, Keeney PM, Berr SB, Khan SM, Portell FR, Shakenov MZ, Antkowiak PF, Kundu B, Tustison N, Brohawn DG, Bennett JP (2016) Recombinant human TFAM stimulates rat brain, rat cervical spinal cord and human neural stem cell mitochondrial bioenergetics. Neurodegeneration Therapeutics p41.LEAK
OXPHOS
CIV
N
S
Isolated mitochondriaRatNervous system
Cacabelos 2016 Acta Neuropathol Commun2016Cacabelos D, Ramírez-Núñez O, Granado-Serrano AB, Torres P, Ayala V, Moiseeva V, Povedano M, Ferrer I, Pamplona R, Portero-Otin M, Boada J (2016) Early and gender-specific differences in spinal cord mitochondrial function and oxidative stress markers in a mouse model of ALS. Acta Neuropathol Commun 4:3.LEAK
ROUTINE
OXPHOS
ETS
N
S
NS
ROX
Intact cells
Permeabilized tissue
MouseNervous system
Other cell lines
Galli 2016 Am J Physiol Regul Integr Comp Physiol2016Galli GL, Crossley J, Elsey RM, Dzialowski EM, Shiels HA, Crossley DA 2nd (2016) Developmental plasticity of mitochondrial function in American alligators, Alligator mississippiensis. Am J Physiol Regul Integr Comp Physiol 311:R1164-72.ETS
LEAK
OXPHOS
CIV
N
Other combinations
ROX
S
Isolated mitochondriaReptilesHeart
MiPNet21.14 Reference sample HRR2016
O2k-Protocols
Development of a reference sample for HRR.
LEAK
ROUTINE
OXPHOS
ETS
F
N
S
Gp
CIV
NS
Other combinations
ROX
Intact cells
Permeabilized cells
HumanHEK
Larsen 2016 FASEB J2016Larsen FJ, Schiffer TA, Ørtenblad N, Zinner C, Morales-Alamo D, Willis SJ, Calbet JA, Holmberg HC, Boushel R (2016) High-intensity sprint training inhibits mitochondrial respiration through aconitase inactivation. FASEB J 30:417-27.LEAK
ROUTINE
OXPHOS
N
NS
Intact cells
Permeabilized cells
Isolated mitochondria
HumanSkeletal muscle
Herbst 2016 Appl Physiol Nutr Metab2016Herbst EA, Holloway GP (2016) Exercise increases mitochondrial glutamate oxidation in the mouse cerebral cortex. Appl Physiol Nutr Metab 41:799-801.LEAK
OXPHOS
NPermeabilized tissueMouseNervous system
Castellano-Gonzalez 2016 Oncotarget2016Castellano-González G, Pichaud N, Ballard JW, Bessede A, Marcal H, Guillemin GJ (2016) Epigallocatechin-3-gallate induces oxidative phosphorylation by activating cytochrome c oxidase in human cultured neurons and astrocytes. Oncotarget 7:7426-40LEAK
ROUTINE
ETS
ROXIntact cellsHumanNervous system
Oliveira 2016 PLOS ONE2016Oliveira MP, Correa Soares JB, Oliveira MF (2016) Sexual preferences in nutrient utilization regulate oxygen consumption and reactive oxygen species generation in Schistosoma mansoni: potential implications for parasite redox biology. PLOS ONE 11:e0158429.LEAK
ROUTINE
F
ROX
Intact organismOther invertebrates
Liepinsh 2016 Biochem J2016Liepinsh E, Makrecka-Kuka M, Volska K, Kuka J, Makarova E, Antone U, Sevostjanovs E, Vilskersts R, Strods A, Tars K, Dambrova M (2016) Long-chain acylcarnitines determine ischaemia/reperfusion-induced damage in heart mitochondria. Biochem J 473:1191-202.LEAK
OXPHOS
S
NS
Isolated mitochondriaRatHeart
Brecht 2016 Toxicol In Vitro2016Brecht K, Riebel V, Couttet P, Paech F, Wolf A, Chibout SD, Pognan F, Krähenbühl S, Uteng M (2016) Mechanistic insights into selective killing of OXPHOS-dependent cancer cells by arctigenin. Toxicol In Vitro 40:55-65.LEAK
OXPHOS
ETS
N
S
CIV
Other combinations
ROX
Permeabilized cellsHumanIslet cell;pancreas;thymus
Wijermars 2016 Am J Transplant2016Wijermars LG, Schaapherder AF, Kostidis S, Wüst RC, Lindeman JH (2016) Succinate accumulation and ischemia reperfusion injury: of mice but not men - A study in renal ischemia reperfusion. Am J Transplant 16:2741-6.LEAK
OXPHOS
ETS
N
S
NS
ROX
Permeabilized tissueHuman
Pig
Mouse
Rat
Kidney
Boeck 2016 Mitochondrion2016Boeck C, Koenig AM, Schury K, Geiger ML, Karabatsiakis A, Wilker S, Waller C, Gündel H, Fegert JM, Calzia E, Kolassa IT (2016) Inflammation in adult women with a history of child maltreatment: The involvement of mitochondrial alterations and oxidative stress. Mitochondrion 30:197-207.LEAK
ROUTINE
ETS
ROXIntact cellsHumanBlood cells
Lymphocyte
Zabielski 2016 Diabetes2016Zabielski P, Lanza IR, Gopala S, Holtz Heppelmann CJ, Bergen HR 3rd, Dasari S, Nair KS (2016) Altered skeletal muscle mitochondrial proteome as the basis of disruption of mitochondrial function in diabetic mice. Diabetes 65:561-73.LEAK
OXPHOS
ETS
F
N
S
NS
ROX
Permeabilized cellsMouseSkeletal muscle
Witt 2016 Metab Brain Dis2016Witt AM, Larsen FS, Bjerring PN (2016) Accumulation of lactate in the rat brain during hyperammonaemia is not associated with impaired mitochondrial respiratory capacity. Metab Brain Dis [Epub ahead of print].LEAK
OXPHOS
ETS
N
S
NS
ROX
HomogenateRatNervous system
Hagl 2016 Nutr Neurosci2016Hagl S, Berressem D, Grewal R, Grebenstein N, Frank J, Eckert GP (2016) Rice bran extract improves mitochondrial dysfunction in brains of aged NMRI mice. Nutr Neurosci 19:1-10.LEAK
OXPHOS
ETS
N
S
CIV
NS
ROX
Isolated mitochondriaMouseNervous system
Pathway control state2016Gnaiger E (2017) Pathway control states. Mitochondr Physiol Network 2016-08-12, edited 2016-11-08, 2017-02-17.LEAK
OXPHOS
ETS
F
N
S
Gp
CIV
NS
Other combinations
Permeabilized cells
Permeabilized tissue
Homogenate
Isolated mitochondria
SMP
Saben 2016 Cell Rep2016Saben JL, Boudoures AL, Asghar Z, Thompson A, Drury A, Zhang W, Chi M, Cusumano A, Scheaffer S, Moley KH (2016) Maternal metabolic syndrome programs mitochondrial dysfunction via germline changes across three generations. Cell Rep 16:1-8.LEAK
OXPHOS
ETS
N
NS
Permeabilized tissueMouseSkeletal muscle
Brandt 2016 Chem Biol Interact2016Brandt AP, Gozzi GJ, Pires Ado R, Martinez GR, Dos Santos Canuto AV, Echevarria A, Di Pietro A, Cadena SM (2016) Impairment of oxidative phosphorylation increases the toxicity of SYD-1 on hepatocarcinoma cells (HepG2). Chem Biol Interact 256:154-60.LEAK
ROUTINE
ETS
ROXIntact cellsHumanLiver
Other cell lines
Kimball 2016 Thesis2016Kimball RL (2016) The role of hypoxia on pyruvate kinase M2, mammalian target of rapamycin, mitochondrial function, and cell invasion in the trophoblast. Master Thesis p55.LEAK
OXPHOS
ETS
N
S
NS
ROX
Permeabilized cellsHumanGenital
Other cell lines
Gorbacheva 2016 International Symposium Mitochondrial Motility2016Gorbacheva OS, Strutynskyi RB, Khmil NV, Belosludtseva NV, Murzaeva SV, Korobeynikova MO, Alilova GA, Lezhnev EI, Mironova GD (2016) Study of the influence of flocalin on the energy and ion exchanges in rat liver mitochondria. International Symposium Mitochondrial Motility 73-7.LEAKF
N
S
RatLiver
Roempler 2016 J Biol Chem2016Römpler K, Müller T, Juris L, Wissel M, Vukotic M, Hofmann K, Deckers M (2016) Overlapping role of respiratory supercomplex factor Rcf2 and its N-terminal homolog Rcf3 in Saccharomyces cerevisiae. J Biol Chem 291:23769-78.LEAK
OXPHOS
N
CIV
NS
ROX
Isolated mitochondriaSaccharomyces cerevisiae
Uecal 2016 J Neurotrauma2016Üçal M, Kraitsy K, Weidinger A, Paier-Pourani J, Patz S, Fink B, Molcanyi M, Schäfer U (2016) Comprehensive profiling of modulation of nitric oxide levels and mitochondrial activity in the injured brain: an experimental study based on the fluid percussion injury model in rats. J Neurotrauma 34:475-86.LEAK
OXPHOS
N
S
HomogenateRatNervous system
Pamenter 2016 Biol Lett2016Pamenter ME, Gomez CR, Richards JG, Milsom WK (2016) Mitochondrial responses to prolonged anoxia in brain of red-eared slider turtles. Biol Lett 12. pii: 20150797.LEAK
OXPHOS
ETS
N
S
CIV
ROX
Permeabilized tissueReptilesNervous system
Schoepf 2016 FEBS J2016Schöpf B, Schäfer G, Weber A, Talasz H, Eder IE, Klocker H, Gnaiger E (2016) Oxidative phosphorylation and mitochondrial function differ between human prostate tissue and cultured cells. FEBS J 283:2181-96.LEAK
OXPHOS
ETS
F
N
S
NS
Other combinations
ROX
Permeabilized cells
Permeabilized tissue
HumanEndothelial;epithelial;mesothelial cell
Genital
Other cell lines
Fibroblast
McCurdy 2016 JCI Insight2016McCurdy CE, Schenk S, Hetrick B, Houck J, Drew BG, Kaye S, Lashbrook M, Bergman BC, Takahashi DL, Dean TA, Nemkov T, Gertsman I, Hansen KC, Philp A, Hevener AL, Chicco AJ, Aagaard KM, Grove KL, Friedman JE (2016) Maternal obesity reduces oxidative capacity in fetal skeletal muscle of Japanese macaques. JCI Insight 1:e86612.LEAK
OXPHOS
ETS
F
N
S
NS
Permeabilized tissueOther mammalsSkeletal muscle
Rohlenova 2016 Antioxid Redox Signal2016Rohlenova K, Sachaphibulkij K, Stursa J, Bezawork-Geleta A, Blecha J, Endaya B, Werner L, Cerny J, Zobalova R, Goodwin J, Spacek T, Alisadeh E, Yan B, Nguyen M, Vondrusova M, Sobol M, Jezek P, Hozak P, Truksa J, Rohlena J, Dong L, Neuzil J (2016) Selective disruption of respiratory supercomplexes as a new strategy to suppress Her2high breast cancer. Antioxid Redox Signal 26:84-103.LEAK
ROUTINE
ETS
N
S
Other combinations
Permeabilized cells
Homogenate
Human
Mouse
Liver
Genital
Other cell lines
Sanchez-Calvo 2016 PLOS ONE2016Sánchez-Calvo B, Cassina A, Rios N, Peluffo G, Boggia J, Radi R, Rubbo H, Trostchansky A (2016) Nitro-arachidonic acid prevents Angiotensin II-induced mitochondrial dysfunction in a cell line of kidney proximal tubular cells. PLOS ONE 11:e0150459.LEAK
ROUTINE
ETS
ROXIntact cellsHumanKidney
Other cell lines
Torres 2016 Redox Biol2016Torres S, Matías N, Baulies A, Nuñez S, Alarcon-Vila C, Martinez L, Nuño N, Fernandez A, Caballeria J, Levade T, Gonzalez-Franquesa A, Garcia-Rovés P, Balboa E, Zanlungo S, Fabrías G, Casas J, Enrich C, Garcia-Ruiz C, Fernández-Checa JC (2016) Mitochondrial GSH replenishment as a potential therapeutic approach for Niemann Pick type C disease. Redox Biol 11:60-72.LEAK
ROUTINE
OXPHOS
ETS
N
S
ROX
HomogenateHuman
Mouse
Nervous system
Liver
Endothelial;epithelial;mesothelial cell
Fibroblast
Franko 2016 Diabetes2016Franko A, Huypens P, Neschen S, Irmler M, Rozman J, Rathkolb B, Neff F, Prehn C, Dubois G, Baumann M, Massinger R, Gradinger D, Przemeck GK, Repp B, Aichler M, Feuchtinger A, Schommers P, Stöhr O, Sanchez-Lasheras C, Adamski J, Peter A, Prokisch H, Beckers J, Walch AK, Fuchs H, Wolf E, Schubert M, Wiesner RJ, Hrabě de Angelis M (2016) Bezafibrate improves insulin sensitivity and metabolic flexibility in STZ-treated diabetic mice. Diabetes 65:2540-52.LEAK
OXPHOS
N
S
CIV
ROX
Permeabilized cells
Permeabilized tissue
HumanSkeletal muscle
Fibroblast
McCourt 2016 PLOS ONE2016McCourt AC, Jakobsson L, Larsson S, Holm C, Piel S, Elmér E, Björkqvist M (2016) White adipose tissue browning in the R6/2 mouse model of Huntington's disease. PLOS ONE 11:e0159870.ETS
LEAK
OXPHOS
NS
ROX
Permeabilized cellsMouseFat
Santos 2016 Insect Biochem Mol Biol2016Santos DE, Alberici LC, Hartfelder K (2016) Mitochondrial structure and dynamics as critical factors in honey bee (Apis mellifera L.) caste development. Insect Biochem Mol Biol 73:1-11.LEAK
OXPHOS
ETS
SPermeabilized tissueHexapodsFat
Schaefer 2016 PLOS ONE2016Schaefer PM, von Einem B, Walther P, Calzia E, von Arnim CA (2016) Metabolic characterization of intact cells reveals intracellular amyloid beta but not its precursor protein to reduce mitochondrial respiration. PLOS ONE 11:e0168157.LEAK
ROUTINE
ETS
CIV
ROX
Intact cellsHuman
Mouse
Nervous system
HEK
Layec 2016 Am J Physiol Endocrinol Metab2016Layec G, Gifford JR, Trinity JD, Hart CR, Garten RS, Park SY, Le Fur Y, Jeong EK, Richardson RS (2016) Accuracy and precision of quantitative 31P-MRS measurements of human skeletal muscle mitochondrial function. Am J Physiol Endocrinol Metab 311:E358-66.LEAK
OXPHOS
N
NS
Permeabilized tissueHumanSkeletal muscle
Yamada 2016 J Physiol2016Yamada T, Takakura H, Jue T, Hashimoto T, Ishizawa R, Furuichi Y, Kato Y, Iwanaka N, Masuda K (2016) Myoglobin and the regulation of mitochondrial respiratory chain complex IV. J Physiol 594:483-95.LEAK
OXPHOS
N
S
CIV
Other combinations
ROX
MouseSkeletal muscle
Other cell lines
Heim 2016 Thesis2016Heim A (2016) Tissue-specific seasonal changes in mitochondrial respiratory function and membrane composition in the golden-matled ground squirrel. Master's Thesis p77.LEAK
OXPHOS
F
N
NS
Other combinations
Isolated mitochondriaOther mammalsHeart
Skeletal muscle
Liver
Fat
Bai 2016 PLOS ONE2016Bai F, Fink BD, Yu L, Sivitz WI (2016) Voltage-dependent regulation of Complex II energized mitochondrial oxygen flux. PLOS ONE 11:e0154982.LEAK
OXPHOS
ETS
N
S
CIV
NS
Isolated mitochondriaMouseHeart
Skeletal muscle
Nervous system
Liver
Vinnakota 2016b Biophys J2016Vinnakota KC, Singhal A, Van den Bergh F, Bagher-Oskouei M, Wiseman RW, Beard DA (2016) Open-loop control of oxidative phosphorylation in skeletal and cardiac muscle mitochondria by Ca2+. Biophys J 110:954-61.LEAK
OXPHOS
NIsolated mitochondriaRatHeart
Skeletal muscle
Reis 2016 Aging (Albany NY)2016Reis FC, Branquinho JL, Brandão BB, Guerra BA, Silva ID, Frontini A, Thomou T, Sartini L, Cinti S, Kahn CR, Festuccia WT, Kowaltowski AJ, Mori MA (2016) Fat-specific Dicer deficiency accelerates aging and mitigates several effects of dietary restriction in mice. Aging (Albany NY) 8:1201-22.LEAKN
S
ROX
Permeabilized cellsMouseFat
Moon 2016 J Biol Chem2016Moon SH, Mancuso DJ, Sims HF, Liu X, Nguyen AL, Yang K, Guan S, Dilthey BG, Jenkins CM, Weinheimer CJ, Kovacs A, Abendschein D, Gross RW (2016) Cardiac myocyte-specific knock-out of calcium-independent phospholipase A2γ (iPLA2γ) decreases oxidized fatty acids during ischemia/reperfusion and reduces infarct size. J Biol Chem 291:19687-700.LEAK
OXPHOS
F
N
NS
Other combinations
ROX
S
Isolated mitochondriaMouseHeart
MiPNet17.03 Shredder vs Fibres2015-06-18
O2k-Protocols
Mitochondrial respiration in permeabilized fibres versus homogenate from fish liver and heart. An application study with the PBI-Shredder.
LEAK
OXPHOS
ETS
N
S
NS
HomogenateFishesHeart
Liver
MiPNet18.05 Amplex-Mouse-heart2015-06-16
O2k-Protocols
O2k-Fluorometry: HRR and H2O2 production in mouse cardiac tissue homogenate.
LEAK
OXPHOS
ETS
N
S
NS
HomogenateMouseHeart
MiPNet20.13 Safranin mt-membranepotential2015-06-15
O2k-Protocols
O2k-Fluorometry: HRR and simultaneous determination of mt-membrane potential with safranin.
LEAK
ETS
S
ROX
HomogenateMouseNervous system
MiPNet20.14 AmplexRed H2O2-production2015-06-15
O2k-Protocols
O2k-Fluorometry: HRR and simultaneous determination of H2O2 production with Amplex Red.
LEAK
OXPHOS
ETS
SIsolated mitochondriaMouseHeart
Petrus 2015 Can J Physiol Pharmacol2015Petruş A, Duicu OM, Sturza A, Noveanu L, Kiss L, Dănilă M, Baczkó I, Muntean DM, Jost N (2015) Modulation of mitochondrial respiratory function and ROS production by novel benzopyran analogues. Can J Physiol Pharmacol 93:811-8.LEAK
OXPHOS
ETS
N
ROX
Isolated mitochondriaRatHeart
Williams 2015 J Biol Chem2015Williams AS, Kang L, Zheng J, Grueter CA, Bracy DP, James FD, Pozzi A, Wasserman DH (2015) Integrin α1-null mice exhibit improved fatty liver when fed a high fat diet despite severe hepatic insulin resistance. J Biol Chem 290:6546-57.LEAK
OXPHOS
F
N
Permeabilized tissueMouseLiver
Other cell lines
Chweih 2015 Exp Physiol2015Chweih H, Castilho RF, Figueira TR (2015) Tissue and sex specificities in Ca(2+) handling by isolated mitochondria in conditions avoiding the permeability transition. Exp Physiol 100(9):1073-92.LEAK
OXPHOS
NIsolated mitochondriaRatHeart
Skeletal muscle
Nervous system
Liver
Ehinger 2015 J Neurol2015Ehinger JK, Morota S, Hansson MJ, Paul G, Elmér E (2015) Mitochondrial dysfunction in blood cells from amyotrophic lateral sclerosis patients. J Neurol 262:1493-503.LEAK
ROUTINE
OXPHOS
ETS
N
S
CIV
NS
ROX
Intact cells
Permeabilized cells
HumanBlood cells
Lymphocyte
Platelet
Hansen 2015 Obesity (Silver Spring)2015Hansen M, Lund MT, Gregers E, Kraunsøe R, Van Hall G, Helge JW, Dela F (2015) Adipose tissue mitochondrial respiration and lipolysis before and after a weight loss by diet and RYGB. Obesity (Silver Spring) 23:2022-9.LEAK
OXPHOS
ETS
F
N
NS
Permeabilized tissueHumanFat
Mikulecky 2015 World Heart J2015Mikulecký M Sr, Gvozdjáková A, Kucharská J, Mojto V, Mikulecký M Jr, Singh RB, Cornélissen G (2015) Are mitochondrial energetics in the rat under control of the solar (24 hours) and/or lunar (24.8 hours) day?. World Heart J 7.LEAK
OXPHOS
Isolated mitochondriaRatHeart
Nervous system
Liver
Hejzlarova 2015 Biochem J2015Hejzlarová K, Kaplanová V, Nůsková H, Kovářová N, Ješina P, Drahota Z, Mráček T, Seneca S, Houštěk J (2015) Alteration of structure and function of ATP synthase and cytochrome c oxidase by lack of Fo-a and Cox3 subunits caused by mitochondrial DNA 9205delTA mutation. Biochem J 466:601-11.LEAK
OXPHOS
ETS
S
CIV
Permeabilized cells
Isolated mitochondria
HumanOther cell lines
Herbst 2015 Metabolism2015Herbst EA, Roussakis C, Matravadia S, Holloway GP (2015) Chronic treadmill running does not enhance mitochondrial oxidative capacity in the cortex or striatum. Metabolism 64:1419-25.LEAK
OXPHOS
N
NS
Permeabilized tissueMouseSkeletal muscle
Nervous system
Bock 2015 Thesis2015Bock UB (2015) Auswirkung von normobarer Hyperoxie auf die mitochondriale Atmung von Alveolarmakrophagen. Dissertation p80.LEAK
ROUTINE
OXPHOS
ETS
N
S
CIV
NS
ROX
Intact cells
Permeabilized cells
MouseLung;gill
Macrophage-derived
Correa 2015 Critical Care Horizon2015Corrêa TD, Jakob SM, Takala J (2015) Mitochondrial function in sepsis. Critical Care Horizon 1:31-41 .LEAK
OXPHOS
N
S
CIV
ROX
Isolated mitochondriaPigLiver
Schoettl 2015 Endocrinology2015Schöttl T, Kappler L, Braun K, Fromme T, Klingenspor M (2015) Limited mitochondrial capacity of visceral versus subcutaneous white adipocytes in male C57BL/6N mice. Endocrinology 156:923-33.LEAK
ROUTINE
OXPHOS
ETS
N
S
ROX
Intact cells
Permeabilized cells
Isolated mitochondria
MouseFat
Sidossis 2015 Cell Metab2015Sidossis LS, Porter C, Saraf MK, Børsheim E, Radhakrishnan RS, Chao T, Ali A, Chondronikola M, Mlcak R, Finnerty CC, Hawkins HK, Toliver-Kinsky T, Herndon DN (2015) Browning of subcutaneous white adipose tissue in humans after severe adrenergic stress. Cell Metab 22:219-27.LEAKF
N
NS
Other combinations
Permeabilized cellsHuman
Mouse
Fat
Kake-Guena 2015 J Exp Zool A Ecol Genet Physiol2015Kake-Guena SA, Touisse K, Vergilino R, Dufresne F, Blier PU, Lemieux H1 (2015) Assessment of mitochondrial functions in Daphnia pulex clones using high-resolution respirometry. J Exp Zool A Ecol Genet Physiol 323:292-300.LEAK
OXPHOS
N
S
CIV
NS
ROX
Permeabilized tissueCrustaceans
Hendricks 2015 Thesis2015Hendricks EW (2015) The impact of aging and estrogen therapy on synaptic mitochondrial bioenergetics in an Alzheimer's mouse model. Master Thesis 1-67.LEAK
ROUTINE
OXPHOS
ETS
N
S
NS
ROX
Intact cells
Permeabilized cells
Isolated mitochondria
MouseNervous system
Smolkova 2015 Int J Biochem Cell Biol2015Smolková K, Dvořák A, Zelenka J, Vítek L, Ježek P (2015) Reductive carboxylation and 2-hydroxyglutarate formation by wild-type IDH2 in breast carcinoma cells. Int J Biochem Cell Biol 65:125-33.LEAK
ROUTINE
ETS
ROXIntact cellsHumanEndothelial;epithelial;mesothelial cell
Other cell lines
Tesori 2015 Sci Rep2015Tesori V, Piscaglia AC, Samengo D, Barba M, Bernardini C, Scatena R, Pontoglio A, Castellini L, Spelbrink JN, Maulucci G, Puglisi MA, Pani G, Gasbarrini A (2015) The multikinase inhibitor Sorafenib enhances glycolysis and synergizes with glycolysis blockade for cancer cell killing. Sci Rep 5:9149.LEAK
ROUTINE
ETS
Intact cellsRatLiver
Other cell lines
Stem cells
Kruska 2015 Biochim Biophys Acta2015Kruska N, Schönfeld P, Pujol A, Reiser G (2015) Astrocytes and mitochondria from adrenoleukodystrophy protein (ABCD1)-deficient mice reveal that the adrenoleukodystrophy-associated very long-chain fatty acids target several cellular energy-dependent functions. Biochim Biophys Acta 1852:925-36.LEAK
OXPHOS
ETS
N
NS
Isolated mitochondriaMouseNervous system
Whitfield 2015 J Physiol2015Whitfield J, Ludzki A, Heigenhauser GJ, Senden JM, Verdijk LB, van Loon LJ, Spriet LL, Holloway GP (2015) Beetroot juice supplementation reduces whole body oxygen consumption but does not improve indices of mitochondrial efficiency in human skeletal muscle. J Physiol 594:421-35.LEAK
OXPHOS
N
NS
Permeabilized tissue
Isolated mitochondria
HumanSkeletal muscle
Kang 2015 Int J Clin Exp Med2015Kang M, Zhao L, Ren M, Deng M, Li C (2015) Reduced metallothionein expression induced by Zinc deficiency results in apoptosis in hepatic stellate cell line LX-2. Int J Clin Exp Med 8:20603-9.LEAK
OXPHOS
SIsolated mitochondriaHumanLiver
Other cell lines
Lim 2015 Am J Cancer Res2015Lim SC, Carey KT, McKenzie M (2015) Anti-cancer analogues ME-143 and ME-344 exert toxicity by directly inhibiting mitochondrial NADH: ubiquinone oxidoreductase (Complex I). Am J Cancer Res 5:689-701.LEAK
ROUTINE
OXPHOS
N
S
Intact cells
Permeabilized cells
Isolated mitochondria
HumanKidney
Other cell lines
HEK
HeLa
Fibroblast
Tan 2015 Cell Metab2015Tan AS, Baty JW, Dong L, Bezawork-Geleta A, Endaya B, Goodwin J, Bajzikova M, Kovarova J, Peterka M, Yan B, Pesdar EA, Sobol M, Filimonenko A, Stuart S, Vondrusova M, Kluckova K, Sachaphibulkij K, Rohlena J, Hozak P, Truksa J, Eccles D, Haupt LM, Griffiths LR, Neuzil J, Berridge MV (2015) Mitochondrial genome acquisition restores respiratory function and tumorigenic potential of cancer cells without mitochondrial DNA. Cell Metab 21:81-94.LEAK
ROUTINE
OXPHOS
ETS
N
S
NS
ROX
Intact cells
Permeabilized cells
Isolated mitochondria
Human
Mouse
Endothelial;epithelial;mesothelial cell
Genital
Other cell lines
Larsen 2015 Physiol Rep2015Larsen S, Scheede-Bergdahl C, Whitesell T, Boushel R, Bergdahl A (2015) Increased intrinsic mitochondrial respiratory capacity in skeletal muscle from rats with streptozotocin-induced hyperglycemia. Physiol Rep 3 pii:e12467.LEAK
OXPHOS
F
N
CIV
NS
Other combinations
ROX
Permeabilized tissueRatSkeletal muscle
Victorino 2015 Tumour Biol2015Victorino VJ, Barroso WA, Assunção AK, Cury V, Jeremias IC, Petroni R, Chausse B, Ariga SK, Herrera AC, Panis C, Lima TM, Souza HP (2015) PGC-1β regulates HER2-overexpressing breast cancer cells proliferation by metabolic and redox pathways. Tumour Biol 37:6035-44.LEAK
ROUTINE
ETS
ROXIntact cellsHumanGenital
Other cell lines
Aroor 2015 Diabetes2015Aroor AR, Habibi J, Ford DA, Nistala R, Lastra G, Manrique C, Dunham MM, Ford KD, Thyfault JP, Parks EJ, Sowers JR, Rector RS (2015) Dipeptidyl peptidase-4 inhibition ameliorates western diet-induced hepatic steatosis and insulin resistance through hepatic lipid remodeling and modulation of hepatic mitochondrial function. Diabetes 64:1988-2001.ETS
LEAK
OXPHOS
ROUTINE
F
N
NS
S
Isolated mitochondriaMouseLiver
Li 2015 Oxid Med Cell Longev2015Li H, Miao W, Ma J, Xv Z, Bo H, Li J, Zhang Y and Ji LL (2015) Acute Exercise-Induced Mitochondrial Stress Triggers an Inflammatory Response in the Myocardium via NLRP3 Inflammasome Activation with Mitophagy. Oxid Med Cell Longev: 357150.LEAK
OXPHOS
NIsolated mitochondriaRatHeart
Cagnone 2015 Methods Mol Biol2015Cagnone G, Vaghjiani V, Lee W, Sun C, Johnson J, Yeung KY, St John JC (2015) Analysis of the mitochondrial DNA and its replicative capacity in induced pluripotent stem cells. Methods Mol Biol 1357:231-67.ETS
LEAK
ROUTINE
ROXIntact cellsHumanStem cells
Dahl 2015 Acta Physiol (Oxf)2015Dahl R, Larsen S, Dohlmann TL, Qvortrup K, Helge JW, Dela F, Prats C (2015) Three dimensional reconstruction of the human skeletal muscle mitochondrial network as a tool to assess mitochondrial content and structural organization. Acta Physiol (Oxf) 213:145-55.LEAK
OXPHOS
ETS
N
CIV
NS
Permeabilized tissueHumanSkeletal muscle
Peyta 2015 Biochim Biophys Acta2015Peyta L, Jarnouen K, Pinault M, Coulouarn C, Guimaraes C, Goupille C, de Barros JP, Chevalier S, Dumas JF, Maillot F, Hatch GM, Loyer P, Servais S (2015) Regulation of hepatic cardiolipin metabolism by TNFα: Implication in cancer cachexia. Biochim Biophys Acta 1851:1490-500.LEAK
ROUTINE
OXPHOS
ETS
NSIntact cells
Permeabilized cells
RatLiver
Other cell lines
Acosta 2015 Obesity (Silver Spring)2015Acosta A, Camilleri M, Shin A, Vazquez-Roque MI, Iturrino J, Lanza IR, Nair KS, Burton D, O'Neill J, Eckert D, Carlson P, Vella A, Zinsmeister AR (2015) Association of UCP-3 rs1626521 with obesity and stomach functions in humans. Obesity (Silver Spring) 23:898-906.LEAK
OXPHOS
N
S
NS
Isolated mitochondriaHumanSkeletal muscle
Singh 2015 Biochim Biophys Acta2015Singh F, Charles AL, Schlagowski AI, Bouitbir J, Bonifacio A, Piquard F, Krähenbühl S, Geny B, Zoll J (2015) Reductive stress impairs myoblasts mitochondrial function and triggers mitochondrial hormesis. Biochim Biophys Acta 1853:1574-85.LEAK
OXPHOS
N
S
NS
Permeabilized tissueMouseSkeletal muscle
Miwa 2015 Free Radic Biol Med2015Miwa S, Treumann A, Bell A, Vistoli G, Nelson G, Hay S, von Zglinicki T (2015) Carboxylesterase converts Amplex red to resorufin: Implications for mitochondrial H2O2 release assays.. Free Radic Biol Med 90:173-83.LEAK
OXPHOS
ETS
N
S
ROX
Isolated mitochondriaMouseLiver
Jardim-Messeder 2015 New Phytol2015Jardim-Messeder D, Caverzan A, Rauber R, de Souza Ferreira E, Margis-Pinheiro M, Galina A (2015) Succinate dehydrogenase (mitochondrial complex II) is a source of reactive oxygen species in plants and regulates development and stress responses. New Phytol 208:776-89.LEAK
OXPHOS
SIsolated mitochondriaPlants
Seillier 2015 EMBO Mol Med2015Seillier M, Pouyet L, N'Guessan P, Nollet M, Capo F, Guillaumond F, Peyta L, Dumas JF, Varrault A, Bertrand G, Bonnafous S, Tran A, Meur G, Marchetti P, Ravier MA, Dalle S, Gual P, Muller D, Rutter GA, Servais S, Iovanna JL, Carrier A (2015) Defects in mitophagy promote redox-driven metabolic syndrome in the absence of TP53INP1. EMBO Mol Med 7:802-18.LEAK
ROUTINE
OXPHOS
ETS
F
CIV
NS
ROX
Intact cells
Permeabilized cells
Human
Mouse
Fibroblast
Bratic 2015 Nat Commun2015Bratic A, Kauppila TE, Macao B, Grönke S, Siibak T, Stewart JB, Baggio F, Dols J, Partridge L, Falkenberg M, Wredenberg A, Larsson NG (2015) Complementation between polymerase- and exonuclease-deficient mitochondrial DNA polymerase mutants in genomically engineered flies. Nat Commun 6:8808.LEAK
OXPHOS
ETS
NPermeabilized tissueDrosophila
Hexapods
Irving 2015 J Clin Endocrinol Metab2015Irving BA, Lanza IR, Henderson GC, Rao RR, Spiegelman BM, Nair KS (2015) Combined training enhances skeletal muscle mitochondrial oxidative capacity independent of age. J Clin Endocrinol Metab 100:1654-63.LEAK
OXPHOS
ETS
N
S
NS
Isolated mitochondriaHumanSkeletal muscle
Errea 2015 J Neuroinflammation2015Errea O, Moreno B, Gonzalez-Franquesa A, Garcia-Roves PM, Villoslada P (2015) The disruption of mitochondrial axonal transport is an early event in neuroinflammation. J Neuroinflammation 12:152.LEAK
OXPHOS
ETS
N
S
CIV
NS
ROX
HomogenateMouseNervous system
Tapia 2015 Crit Care2015Tapia P, Soto D, Bruhn A, Alegría L, Jarufe N, Luengo C, Kattan E, Regueira T, Meissner A, Menchaca R, Vives MI, Echeverría N, Ospina-Tascón G, Bakker J, Hernández G (2015) Impairment of exogenous lactate clearance in experimental hyperdynamic septic shock is not related to total liver hypoperfusion. Crit Care 19:188.LEAK
OXPHOS
N
NS
Isolated mitochondriaOther mammalsLiver
Hagl 2015 J Alzheimers Dis2015Hagl S, Grewal R, Ciobanu I, Helal A, Khayyal MT, Muller WE, Eckert GP (2015) Rice bran extract compensates mitochondrial dysfunction in a cellular model of early Alzheimer’s disease. J Alzheimers Dis 43:927-38.LEAK
OXPHOS
ETS
N
S
CIV
NS
ROX
Permeabilized cellsRatNervous system
Kidney
Other cell lines
Lantier 2015 Diabetes2015Lantier L, Williams AS, Williams IM, Yang KK, Bracy DP, Goelzer M, James FD, Gius D, Wasserman DH (2015) SIRT3 is crucial for maintaining skeletal muscle insulin action and protects against severe insulin resistance in high fat fed mice. Diabetes 64:3081-92.LEAK
OXPHOS
F
N
Permeabilized tissueMouseSkeletal muscle
Weidinger 2015 Antioxid Redox Signal2015Weidinger A, Müllebner A, Paier-Pourani J, Banerjee A*, Miller I, Lauterböck L, Duvigneau JC, Skulachev VP, Redl H, Kozlov AV (2015) Vicious inducible nitric oxide synthase-mitochondrial reactive oxygen species cycle accelerates inflammatory response and causes liver injury in rats. Antioxid Redox Signal 22:572-86.LEAK
OXPHOS
ETS
N
S
HomogenateRatLiver
Diana 2015 Surg Innov2015Diana M, Noll E, Diemunsch P, Moussallieh FM, Namer IJ, Charles AL, Lindner V, Agnus V, Geny B, Marescaux J (2015) Metabolism-guided bowel resection: potential role and accuracy of instant capillary lactates to identify the optimal resection site. Surg Innov 22:453-61.LEAK
OXPHOS
N
S
CIV
PigEndothelial;epithelial;mesothelial cell
Tyrrell 2015 Exp Gerontol2015Tyrrell DJ, Bharadwaj MS, Van Horn CG, Marsh AP, Nicklas BJ, Molina AJ (2015) Blood-cell bioenergetics are associated with physical function and inflammation in overweight/obese older adults. Exp Gerontol 70:84-91.LEAK
ETS
Intact cellsHumanBlood cells
Lymphocyte
Birkenmeier 2015 Int J Cancer2015Birkenmeier K, Dröse S, Wittig I, Winkelmann R, Käfer V, Döring C, Hartmann S, Wenz T, Reichert AS, Brandt U, Hansmann ML (2015) Hodgkin and Reed-Sternberg cells of classical Hodgkin lymphoma are highly dependent on oxidative phosphorylation. Int J Cancer 138:2231-46.LEAK
ROUTINE
ETS
CIV
ROX
HumanOther cell lines
HeLa
Macrophage-derived
Torelli 2015 Free Radic Biol Med2015Torelli NQ, Ferreira-Júnior JR, Kowaltowski AJ, da Cunha FM (2015) RTG1- and RTG2-dependent retrograde signaling controls mitochondrial activity and stress resistance in Saccharomyces cerevisiae. Free Radic Biol Med 81C:30-7.LEAK
ROUTINE
OXPHOS
ETS
CIV
ROX
Intact cells
Isolated mitochondria
Saccharomyces cerevisiae
Hwang 2015 EMBO Mol Med2015Hwang S, Disatnik MH, Mochly-Rosen D (2015) Impaired GAPDH-induced mitophagy contributes to the pathology of Huntington's disease. EMBO Mol Med 7:1307-26.LEAK
OXPHOS
ETS
ROXIntact cellsRatNervous system
Other cell lines
Chu 2015 Liver Transpl2015Chu MJ, Hickey AJ, Jiang Y, Petzer A, Bartlett AS, Phillips AR (2015) Mitochondrial dysfunction in steatotic rat livers occurs because a defect in complex I makes the liver susceptible to prolonged cold ischemia. Liver Transpl 21:396-407.LEAK
OXPHOS
ETS
N
S
HomogenateRatLiver
Lee 2015 Methods Mol Biol2015Lee W, Kelly RD, Yeung KY, Cagnone G, McKenzie M, John JC (2015) Analysis of mitochondrial DNA in induced pluripotent and embryonic stem cells. Methods Mol Biol 1330:219-52.LEAK
ROUTINE
ETS
ROXIntact cellsMouseStem cells
Wuest 2015 J Physiol2015Wüst RC, Helmes M, Stienen GJ (2015) Rapid changes in NADH and flavin autofluorescence in rat cardiac trabeculae reveal large mitochondrial complex II reserve capacity. J Physiol 593:1829-40.LEAK
OXPHOS
N
S
NS
ROX
Permeabilized tissueRatHeart
Porter 2015 Shock2015Porter C, Herndon DN, Bhattarai N, Ogunbileje JO, Szczesny B, Szabo C, Toliver-Kinsky T, Sidossis LS (2015) Severe burn injury induces thermogenically functional mitochondria in murine white adipose tissue. Shock 44:258-64.LEAKF
N
NS
Other combinations
S
Permeabilized tissueMouseFat
Diana 2015 Obes Surg2015Diana M, Pop R, Beaujeux R, Dallemagne B, Halvax P, Schlagowski I, Liu YY, Diemunsch P, Geny B, Lindner V, Marescaux J (2015) Embolization of arterial gastric supply in obesity (EMBARGO): an endovascular approach in the management of morbid obesity. proof of the concept in the porcine model.. Obes Surg 25:550-8.LEAK
OXPHOS
Permeabilized tissuePigEndothelial;epithelial;mesothelial cell
Burtscher 2015 Mitochondrion2015Burtscher J, Zangrandi L, Schwarzer C, Gnaiger E (2015) Differences in mitochondrial function in homogenated samples from healthy and epileptic specific brain tissues revealed by high-resolution respirometry. Mitochondrion 25:104-12.LEAK
OXPHOS
ETS
N
S
CIV
NS
ROX
Permeabilized tissue
Homogenate
MouseNervous system
Zelenka 2015 Oxid Med Cell Longev2015Zelenka J, Dvořák A, Alán L (2015) L-lactate protects skin fibroblasts against aging-associated mitochondrial dysfunction via mitohormesis. Oxid Med Cell Longev 2015:351698.LEAK
ROUTINE
ETS
N
S
Intact cells
Isolated mitochondria
RatLiver
Endothelial;epithelial;mesothelial cell
Fibroblast
Saraf 2015 J Burn Care Res2015Saraf MK, Herndon DN, Porter C, Toliver-Kinsky T, Radhakrishnan R, Chao T, Chondronikola M, Sidossis LS (2015) Morphological changes in subcutaneous white adipose tissue after severe burn injury. J Burn Care Res 37:e96-e103.LEAK
OXPHOS
F
N
Other combinations
Permeabilized tissueHumanFat
Soares 2015 PLoS One2015Soares JB, Gaviraghi A, Oliveira MF (2015) Mitochondrial physiology in the major arbovirus vector Aedes aegypti: substrate preferences and sexual differences define respiratory capacity and superoxide production. PLoS One 10:e0120600.LEAK
OXPHOS
ETS
N
S
Gp
NS
Other combinations
ROX
Permeabilized tissue
Isolated mitochondria
HexapodsSkeletal muscle
Guadalupe-Grau 2015 J Sports Sci2015Guadalupe-Grau A, Plenge U, Helbo S, Kristensen M, Andersen PR, Fago A, Belhage B, Dela F, Helge JW (2015) Effects of an 8-weeks erythropoietin treatment on mitochondrial and whole body fat oxidation capacity during exercise in healthy males. J Sports Sci 33:570-8.LEAK
OXPHOS
F
N
NS
Other combinations
ROX
Permeabilized tissueHumanSkeletal muscle
Porter 2015 Med Sci Sports Exerc2015Porter C, Reidy PT, Bhattarai N, Sidossis LS, Rasmussen BB (2015) Resistance exercise training alters mitochondrial function in human skeletal muscle. Med Sci Sports Exerc 47:1922-31.ETS
LEAK
OXPHOS
N
NS
S
Permeabilized tissueHumanSkeletal muscle
Karadayian 2015 Neuroscience2015Karadayian AG, Bustamante J, Czerniczyniec A, Lombardi P, Cutrera RA, Lores-Arnaiz S (2015) Alcohol hangover induces mitochondrial dysfunction and free radical production in mouse cerebellum. Neuroscience 304:47-59.LEAK
OXPHOS
N
S
Other combinations
Isolated mitochondriaMouseNervous system
Nelson 2015 Master Thesis2015Nelson MB (2015) The role of receptors for advanced glycation end-products (RAGE) and ceramide in cardiovascular disease. Master Thesis 1-53.LEAK
OXPHOS
ETS
N
S
NS
Permeabilized cells
Permeabilized tissue
Mouse
Rat
Heart
Other cell lines
Cell ergometry2015Gnaiger E (2015) Cell ergometry and OXPHOS. Mitochondr Physiol Network 2015-01-18.LEAK
OXPHOS
ETS
N
S
NS
ROX
Rodrigues 2015 J Cell Biochem2015Rodrigues MF, Carvalho É, Pezzuto P, Rumjanek FD, Amoêdo ND (2015) Reciprocal modulation of histone deacetylase inhibitors sodium butyrate and trichostatin a on the energy metabolism of breast cancer cells. Int J Biochem Cell Biol 116:797-808.LEAK
ROUTINE
OXPHOS
ETS
ROXIntact cellsHumanEndothelial;epithelial;mesothelial cell
Other cell lines
Kilbaugh 2015 J Am Heart Assoc2015Kilbaugh TJ, Sutton RM, Karlsson M, Hansson MJ, Naim MY, Morgan RW, Bratinov G, Lampe JW, Nadkarni VM, Becker LB, Margulies SS, Berg RA (2015) Persistently Altered Brain Mitochondrial Bioenergetics After Apparently Successful Resuscitation From Cardiac Arrest. J Am Heart Assoc 4(9) pii: e002232.LEAK
OXPHOS
ETS
N
S
CIV
NS
ROX
HomogenatePigNervous system
Hagve 2015 Am J Physiol Endocrinol Metab2015Hagve M, Gjessing PF, Fuskevåg OM, Larsen TS, Irtun Ø (2015) Skeletal muscle mitochondria exhibit decreased pyruvate oxidation capacity and increased ROS emission during surgery-induced acute insulin resistance. Am J Physiol Endocrinol Metab 308:E613-20.LEAK
OXPHOS
F
N
Isolated mitochondriaPigSkeletal muscle
Liver
Sundaram 2015 Mol Microbiol2015Sundaram V, Petkova MI, Pujol-Carrion N, Boada J, de la Torre-Ruiz MA (2015) Tor1, Sch9 and PKA downregulation in quiescence rely on Mtl1 to preserve mitochondrial integrity and cell survival. Mol Microbiol 97:93-109.LEAK
ROUTINE
ETS
ROXIntact cellsSaccharomyces cerevisiae
Wessels 2015 Diabetes Obes Metab2015Wessels B, Ciapaite J, van den Broek NM, Houten SM, Nicolay K, Prompers JJ (2015) Pioglitazone treatment restores in vivo muscle oxidative capacity in a rat model of diabetes. Diabetes Obes Metab 17:52-60.LEAK
OXPHOS
ETS
F
N
S
Isolated mitochondriaRatSkeletal muscle
Ferrera 2015 J Thorac Cardiovasc Surg2015Ferrera R, Benhabbouche S, Da Silva CC, Alam MR, Ovize M (2015) Delayed low pressure at reperfusion: A new approach for cardioprotection. J Thorac Cardiovasc Surg 150:1641-8.LEAK
OXPHOS
NIsolated mitochondriaRatHeart
Papazova 2015 Am J Physiol Renal Physiol2015Papazova DA, Friederich-Persson M, Joles JA, Verhaar MC (2015) Renal transplantation induces mitochondrial uncoupling, increased kidney oxygen consumption, and decreased kidney oxygen tension. Am J Physiol Renal Physiol 308:F22-8.LEAK
OXPHOS
NIsolated mitochondriaRatKidney
Boss 2015 US Patent2015Boss OD, Crisan M, Giacobino JP, (2015) Brown adipocyte progenitors in human sceletal muscle. US Patent US 2015/0240206 A1.LEAK
ROUTINE
ETS
ROXPermeabilized cellsHuman
Mouse
Skeletal muscle
Endothelial;epithelial;mesothelial cell
Fat
Youcef 2015 Biochem Pharmacol2015Youcef G, Belaidi E, Waeckel L, Fazal L, Clemessy M, Vincent MP, Zadigue G, Richer C, Alhenc-Gelas F, Ovize M, Pizard A (2015) Tissue kallikrein is required for the cardioprotective effect of cyclosporin A in myocardial ischemia in the mouse. Biochem Pharmacol 94:22-9.LEAK
OXPHOS
N
S
CIV
Isolated mitochondriaMouseHeart
Paglialunga 2015 Diabetologia2015Paglialunga S, Ludzki A, Root-McCaig J, Holloway GP (2015) In adipose tissue, increased mitochondrial emission of reactive oxygen species is important for short-term high-fat diet-induced insulin resistance in mice. Diabetologia 58:1071-80.LEAK
OXPHOS
F
N
Permeabilized tissueMouseFat
Kruse 2015 Aging Cell2015Kruse SE, Karunadharma PP, Basisty N, Johnson R, Beyer RP, MacCoss MJ, Rabinovitch PS, Marcinek DJ (2015) Age modifies respiratory complex I and protein homeostasis in a muscle type-specific manner. Aging Cell 15:89-99.LEAK
OXPHOS
ETS
N
S
CIV
NS
ROX
Permeabilized tissueMouseSkeletal muscle
Kilbaugh 2015 Exp Neurol2015Kilbaugh TJ, Karlsson M, Byro M, Bebee A, Ralston J, Sullivan S, Duhaime AC, Hansson MJ, Elmér E, Margulies SS (2015) Mitochondrial bioenergetic alterations after focal traumatic brain injury in the immature brain. Exp Neurol 271:136-144.LEAK
ROUTINE
OXPHOS
ETS
N
S
CIV
NS
ROX
Permeabilized tissue
Homogenate
PigNervous system
Hasli 2015 Master Thesis2015Hasli PR (2015) Characterization of mitochondrial respiration and quality differences in diploid and triploid Atlantic salmon (Salmo salar L.) at 5 °C, 10 °C and 15 °C. Master Thesis:1-147.LEAK
OXPHOS
ETS
N
S
NS
ROX
Permeabilized tissue
Homogenate
FishesHeart
Skeletal muscle
Herbst 2015 J Physiol2015Herbst EA, Holloway GP (2015) Permeabilization of brain tissue in situ enables multi-region analysis of mitochondrial function in a single mouse brain. J Physiol 593:787-801.LEAK
OXPHOS
N
NS
S
Isolated mitochondria
Permeabilized tissue
MouseNervous system
Lemoine 2015 Transplantation2015Lemoine S, Pillot B, Rognant N, Augeul L, Rayberin M, Varennes A, Laville M, Ovize M, Juillard L (2015) Postconditioning with cyclosporine a reduces early renal dysfunction by inhibiting mitochondrial permeability transition. Transplantation. 99:717-23LEAK
OXPHOS
NIsolated mitochondriaMouseKidney
Czerniczyniec 2015 J Bioenerg Biomembr2015Czerniczyniec A, Lanza EM, Karadayian AG, Bustamante J, Lores-Arnaiz S (2015) Impairment of striatal mitochondrial function by acute paraquat poisoning. J Bioenerg Biomembr 47:395-408.LEAK
OXPHOS
N
ROX
Isolated mitochondriaRatNervous system
Garama 2015 Mol Cell Biol2015Garama DJ, Harris TJ, White CL, Rossello FJ, Abdul-Hay M, Gough DJ, Levy DE (2015) A Synthetic Lethal Interaction between Glutathione Synthesis and Mitochondrial Reactive Oxygen Species Provides a Tumor-Specific Vulnerability Dependent on STAT3. Mol Cell Biol 35(21):3646-56.LEAK
ROUTINE
ETS
Intact cellsMouseEndothelial;epithelial;mesothelial cell
Fibroblast
Agil 2015 J Pineal Res2015Agil A, El-Hammadi M, Jiménez-Aranda A, Tassi M, Abdo W, Fernández-Vázquez G, Reiter RJ (2015) Melatonin reduces hepatic mitochondrial dysfunction in diabetic obese rats. J Pineal Res 59:70-9.LEAK
OXPHOS
SIsolated mitochondriaRatLiver
Crombie 2015 Biochem Biophys Rep2015Crombie DE, van Bergena N, Davidsona KC, Anjomani Virmounib S, Mckelviec PA, Chrysostomoua V, Conquesta A, Corbend LA, Pookb MA, Kulkarnia T, Trouncea IA, Peraf MF, Delatyckid MB, Pébaya A (2015) Characterization of the retinal pigment epithelium in Friedreich ataxia. Biochem Biophys Rep 4:141–7.LEAK
OXPHOS
ETS
N
S
NS
ROX
Permeabilized cellsHumanNervous system
Endothelial;epithelial;mesothelial cell
Stem cells
Yan 2015 BMC Cancer2015Yan B, Stantic M, Zobalova R, Bezawork-Geleta A, Stapelberg M, Stursa J, Prokopova K, Dong L, Neuzil J (2015) Mitochondrially targeted vitamin E succinate efficiently kills breast tumour-initiating cells in a complex II-dependent manner. BMC Cancer 15:401.ETS
LEAK
OXPHOS
ROUTINE
N
NS
ROX
S
Intact cells
Permeabilized cells
Human
Mouse
Genital
Other cell lines
Hanssen 2015 Diabetes2015Hanssen MJ, van der Lans AA, Brans B, Hoeks J, Jardon KM, Schaart G, Mottaghy FM, Schrauwen P, van Marken Lichtenbelt WD (2015) Short-term cold acclimation recruits brown adipose tissue in obese humans. Diabetes 65:1179-89.LEAK
OXPHOS
ETS
F
N
NS
Other combinations
Permeabilized tissueHumanSkeletal muscle
Chausse 2015 PLoS One2015Chausse B, Vieira-Lara MA, Sanchez AB, Medeiros MH, Kowaltowski AJ (2015) Intermittent fasting results in tissue-specific changes in bioenergetics and redox state. PLoS One 10:e0120413.LEAK
OXPHOS
N
S
CIV
Isolated mitochondriaRatHeart
Skeletal muscle
Nervous system
Liver
Gnaiger 2015 Scand J Med Sci Sports2015Gnaiger E, Boushel R, Søndergaard H, Munch-Andersen T, Damsgaard R, Hagen C, Díez-Sánchez C, Ara I, Wright-Paradis C, Schrauwen P, Hesselink M, Calbet JAL, Christiansen M, Helge JW, Saltin B (2015) Mitochondrial coupling and capacity of oxidative phosphorylation in skeletal muscle of Inuit and caucasians in the arctic winter. Scand J Med Sci Sports 25 (Suppl 4):126–34.ETS
LEAK
OXPHOS
F
N
ROX
S
Permeabilized tissueHumanSkeletal muscle
Kelly 2015 Biotechnol J2015Kelly PS, Breen L, Gallagher C, Kelly S, Henry M, Lao NT, Meleady P, O'Gorman D, Clynes M, Barron N (2015) Re-programming CHO cell metabolism using miR-23 tips the balance towards a highly productive phenotype. Biotechnol J 10:1029-40.LEAK
ROUTINE
OXPHOS
ETS
N
S
CIV
NS
ROX
Intact cells
Permeabilized cells
CHO
Clemens 2015 Brain2015Clemens LE, Weber JJ, Wlodkowski TT, Yu-Taeger L, Michaud M, Calaminus C, Eckert SH, Gaca J, Weiss A, Magg JC, Jansson EK, Eckert GP, Pichler BJ, Bordet T, Pruss RM, Riess O, Nguyen HP (2015) Olesoxime suppresses calpain activation and mutant huntingtin fragmentation in the BACHD rat. Brain 138:3632-53.LEAK
OXPHOS
ETS
N
S
CIV
NS
ROX
Isolated mitochondriaRatNervous system
Boutant 2015 Mol Metab2015Boutant M, Joffraud M, Kulkarni SS, Garcia-Casarrubios E, Garcia-Roves PM, Ratajczak J, Fernandez-Marcos PJ, Valverde AM, Serrano M, Canto C (2015) SIRT1 enhances glucose tolerance by potentiating brown adipose tissue function. Mol Metab 4:118-31.ETS
LEAK
OXPHOS
N
NS
ROX
S
Homogenate
Permeabilized tissue
MouseFat
Liver
Skeletal muscle
Sheldon 2015 Am J Physiol Gastrointest Liver Physiol2015Sheldon RD, Padilla J, Jenkins NT, Laughlin MH, Rector RS (2015) Chronic NOS inhibition accelerates NAFLD progression in an obese rat model. Am J Physiol Gastrointest Liver Physiol 308:G540-9.LEAK
OXPHOS
ETS
N
NS
Isolated mitochondriaRatLiver
Imran 2015 J Neurochem2015Imran I, Hillert MH, Klein J (2015) Early metabolic responses to lithium/pilocarpine-induced status epilepticus in rat brain. J Neurochem 135:1007-18.LEAK
OXPHOS
ETS
N
S
CIV
NS
ROX
Isolated mitochondriaRatNervous system
Beauchamp 2015 Biosci Rep2015Beauchamp B, Thrush AB, Quizi J, Antoun G, McIntosh N, Al-Dirbashi OY, Patti ME, Harper ME (2015) Undernutrition during pregnancy in mice leads to dysfunctional cardiac muscle respiration in adult offspring. Biosci Rep 35. pii:e00200.LEAK
OXPHOS
F
NS
Other combinations
ROX
HomogenateMouseHeart
Liver
Rodrigues 2016 Biochem J2015Rodrigues MF, Obre E, Melo FH, Santos-Jr GC, Galina A, Jasiulionis MG, Rossignol R, Rumjanek FD, Amoedo ND (2016) Enhanced OXPHOS, glutaminolysis and beta-oxidation constitute the metastatic phenotype of melanoma cells. Biochem J 473:703-15.LEAK
ROUTINE
OXPHOS
ETS
F
N
S
ROX
Intact cells
Permeabilized cells
MouseEndothelial;epithelial;mesothelial cell
Other cell lines
Mourier 2015 J Cell Biol2015Mourier A, Motori E, Brandt T, Lagouge M, Atanassov I, Galinier A, Rappl G, Brodesser S, Hultenby K, Dieterich C, Larsson NG (2015) Mitofusin 2 is required to maintain mitochondrial coenzyme Q levels. J Cell Biol 208:429-42.LEAK
OXPHOS
ETS
N
S
Gp
Other combinations
Permeabilized cells
Isolated mitochondria
MouseHeart
Fibroblast
Wessels 2015 Am J Physiol2015Wessels B, van den Broek NM, Ciapaite J, Houten SM, Wanders RJ, Nicolay K, Prompers JJ. (2015) Carnitine supplementation in high-fat diet-fed rats does not ameliorate lipid-induced skeletal muscle mitochondrial dysfunction in vivo. Am J Physiol 309(7):E670-8.LEAK
OXPHOS
ETS
F
N
Isolated mitochondriaRatSkeletal muscle
Ramos-Filho 2015 PLoS One2015Ramos-Filho D, Chicaybam G, de-Souza-Ferreira E, Guerra Martinez C, Kurtenbach E, Casimiro-Lopes G, Galina A (2015) High intensity interval training (HIIT) induces specific changes in respiration and electron leakage in the mitochondria of different rat skeletal muscles. PLoS One 10:e0131766.LEAK
OXPHOS
ETS
F
N
S
Gp
NS
ROX
Permeabilized tissueRatSkeletal muscle
Janssens 2015 Nutr Metab (Lond)2015Janssens S, Heemskerk MM, van den Berg SA, van Riel NA, Nicolay K, Willems van Dijk K, Prompers JJ (2015) Effects of low-stearate palm oil and high-stearate lard high-fat diets on rat liver lipid metabolism and glucose tolerance. Nutr Metab (Lond) 12:57.LEAK
OXPHOS
F
N
Isolated mitochondriaRatLiver
Orynbayeva 2015 Nanomedicine (Lond)2015Orynbayeva Z, Sensenig R, Polyak B (2015) Metabolic and structural integrity of magnetic nanoparticle-loaded primary endothelial cells for targeted cell therapy. Nanomedicine (Lond) 10:1555-68.LEAK
ROUTINE
ETS
ROXIntact cellsRatEndothelial;epithelial;mesothelial cell
Doerrier 2015 Thesis2015Doerrier C (2015) Estudio bioenergetica mitochondrial en la sepsis experimental y efecto protector de la Melatonina. Doctoral Thesis p154.LEAK
OXPHOS
ETS
N
S
NS
Permeabilized tissue
Isolated mitochondria
MouseHeart
Liver
Schrauwen-Hinderling 2015 Antioxid Redox Signal2015Schrauwen-Hinderling VB, Kooi ME, Schrauwen P (2015) Mitochondrial function and diabetes; consequences for skeletal and cardiac muscle metabolism. Antioxid Redox Signal 24:39-51.LEAK
OXPHOS
F
N
S
CIV
Permeabilized tissue
Isolated mitochondria
HumanHeart
Skeletal muscle
Roy Chowdhury 2015 Biosci Rep2015Roy Chowdhury SK, Djordjevic J, Albensi B, Fernyhough P (2015) Simultaneous evaluation of substrate-dependent oxygen consumption rates and mitochondrial membrane potential by TMRM and safranin in cortical mitochondria. Biosci Rep 36.LEAK
OXPHOS
ETS
N
S
NS
ROX
Homogenate
Isolated mitochondria
MouseNervous system
Kawalec 2015 PLoS One2015Kawalec M, Boratyńska-Jasińska A, Beręsewicz M, Dymkowska D, Zabłocki K, Zabłocka B (2015) Mitofusin 2 deficiency affects energy metabolism and mitochondrial biogenesis in MEF cells. PLoS One 10:e0134162.ETS
LEAK
ROUTINE
Permeabilized cellsMouseFibroblast
Drechsler 2015 Intensive Care Medicine Experimental2015Drechsler S, Weixelbaumer KM, Weidinger A, Raeven P, Khadem A, Redl H, van Griensven M, Bahrami S, Remick D, Kozlov A, Osuchowski MF (2015) Why do they die? Comparison of selected aspects of organ injury and dysfunction in mice surviving and dying in acute abdominal sepsis. Intensive Care Medicine Experimental 3:12.LEAK
OXPHOS
ETS
N
S
HomogenateMouseLiver
Kidney
Diana 2015 Br J Surg2015Diana M, Agnus V, Halvax P, Liu YY, Dallemagne B, Schlagowski AI, Geny B, Diemunsch P, Lindner V, Marescaux J (2015) Intraoperative fluorescence-based enhanced reality laparoscopic real-time imaging to assess bowel perfusion at the anastomotic site in an experimental model. Br J Surg 102:e169-76.LEAK
OXPHOS
Permeabilized tissuePigEndothelial;epithelial;mesothelial cell
Cassina 2015 Biol Reprod2015Cassina AM, Silveira P, Cantu L, Montes JM, Radi R, Sapiro R (2015) Defective Human sperm cells are associated with mitochondrial dysfunction and oxidant production. Biol Reprod 93:119.LEAK
ROUTINE
ETS
ROXHumanGenital
Conner 2015 FASEB J2015Conner B, Hetrik B, Chicco A, McCurdy C (2015) Maternal obesity alters offspring muscle mitochondrial function in nonhuman primates. FASEB J 29:1036.7.LEAK
OXPHOS
FPermeabilized tissueOther mammalsSkeletal muscle
Kasvandik 2015 J Proteome Res2015Kasvandik S, Samuel K, Peters M, Eimre M, Peet N, Roost AM, Padrik L, Paju K, Peil L, Salumets A (2015) Deep quantitative proteomics reveals extensive metabolic reprogramming and cancer-like changes of ectopic endometriotic stromal cells. J Proteome Res 15:572-84.LEAK
ROUTINE
ETS
ROXHumanGenital
Other cell lines
Duicu 2015 Biomed Res Int2015Duicu OM, Lighezan R, Sturza A, Ceausu RA, Borza C, Vaduva A, Noveanu L, Gaspar M, Ionac A, Feier H, Muntean DM, Mornos C (2015) Monoamine oxidases as potential contributors to oxidative stress in diabetes: time for a study in patients undergoing heart surgery. Biomed Res Int 2015:515437.LEAK
OXPHOS
ETS
N
S
ROX
Permeabilized tissueHumanHeart
Nordquist 2015 J Am Soc Nephrol2015Nordquist L, Friederich-Persson M, Fasching A, Liss P, Shoji K, Nangaku M, Hansell P, Palm F (2015) Activation of hypoxia-inducible factors prevents diabetic nephropathy. J Am Soc Nephrol 26:328-38.LEAK
OXPHOS
NIsolated mitochondriaRatKidney
Hals 2015 PLoS One2015Hals IK, Bruerberg SG, Ma Z, Scholz H, Björklund A, Grill V (2015) Mitochondrial respiration in insulin-producing β-cells: general characteristics and adaptive effects of hypoxia. PLoS One 10:e0138558.LEAK
ROUTINE
OXPHOS
ETS
N
S
NS
ROX
Intact cells
Permeabilized cells
RatIslet cell;pancreas;thymus
Other cell lines
Li 2015 Sci Rep2015Li P, Wang B, Sun F, Li Y, Li Q, Lang H, Zhao Z, Gao P, Zhao Y, Shang Q, Liu D, Zhu Z (2015) Mitochondrial respiratory dysfunctions of blood mononuclear cells link with cardiac disturbance in patients with early-stage heart failure. Sci Rep 5:10229.LEAK
ROUTINE
OXPHOS
ETS
N
S
NS
Intact cellsHumanBlood cells
Lymphocyte
Van Rahden 2015 Am J Hum Genet2015van Rahden VA, Fernandez-Vizarra E, Alawi M, Brand K, Fellmann F, Horn D, Zeviani M, Kutsche K (2015) Mutations in NDUFB11, encoding a complex I component of the mitochondrial respiratory chain, cause microphthalmia with linear skin defects syndrome. Am J Hum Genet 96:640-50.LEAK
ROUTINE
ETS
Intact cellsHumanHeLa
Kilbaugh 2015 PLoS One2015Kilbaugh TJ, Lvova M, Karlsson M, Zhang Z, Leipzig J, Wallace DC, Margulies SS (2015) Peripheral blood mitochondrial DNA as a biomarker of cerebral mitochondrial dysfunction following traumatic brain injury in a porcine model. PLoS One 10:e0130927.LEAK
OXPHOS
N
S
NS
HomogenatePigNervous system
Hanssen 2015 Nat Med2015Hanssen MJ, Hoeks J, Brans B, van der Lans AA, Schaart G, van den Driessche JJ, Jörgensen JA, Boekschoten MV, Hesselink MK, Havekes B, Kersten S, Mottaghy FM, van Marken Lichtenbelt WD, Schrauwen P (2015) Short-term cold acclimation improves insulin sensitivity in patients with type 2 diabetes mellitus. Nat Med 21:863-5.LEAK
OXPHOS
ETS
F
N
NS
Other combinations
Permeabilized tissueHumanSkeletal muscle
Richman 2015 PLoS Genet2015Richman TR, Ermer JA, Davies SM, Perks KL, Viola HM, Shearwood AM, Hool LC, Rackham O, Filipovska A (2015) Mutation in MRPS34 compromises protein synthesis and causes mitochondrial dysfunction. PLoS Genet 11:e1005089.LEAK
OXPHOS
N
S
CIV
Isolated mitochondriaMouseHeart
Liver
Baris 2015 Am J Physiol Regul Integr Comp Physiol2015Baris TZ, Crawford DL, Oleksiak MF (2015) Acclimation and acute temperature effects on population differences in oxidative phosphorylation. Am J Physiol Regul Integr Comp Physiol 310:R185-96.LEAK
OXPHOS
ETS
N
S
CIV
NS
Other combinations
ROX
Permeabilized tissueFishesHeart
Kluckova 2015 Methods Mol Biol2015Kluckova K, Dong L, Bajzikova M, Rohlena J, Neuzil J (2015) Evaluation of respiration of mitochondria in cancer cells exposed to mitochondria-targeted agents. Methods Mol Biol 1265:181-94.ETS
LEAK
OXPHOS
N
NS
ROX
S
Homogenate
Intact cells
Permeabilized cells
MouseEndothelial;epithelial;mesothelial cell
Genital
Other cell lines
Six 2015 Cell Death Dis2015Six E, Lagresle-Peyrou C, Susini S, De Chappedelaine C, Sigrist N, Sadek H, Chouteau M, Cagnard N, Fontenay M, Hermine O, Chomienne C, Reynier P, Fischer A, André-Schmutz I, Gueguen N, Cavazzana M (2015) AK2 deficiency compromises the mitochondrial energy metabolism required for differentiation of human neutrophil and lymphoid lineages. Cell Death Dis 6:e1856.LEAK
ROUTINE
ETS
ROXIntact cellsHumanBlood cells
Other cell lines
Margulies 2015 Brain Pathol2015Margulies SS, Kilbaugh T, Sullivan S, Smith C, Propert K, Byro M, Saliga K, Costine BA, Duhaime AC (2015) Establishing a clinically relevant large animal model platform for TBI therapy development: using Cyclosporin A as a case study. Brain Pathol 25:289-303.LEAK
OXPHOS
NSIsolated mitochondriaPigNervous system
Porter 2015 Am J Physiol Endocrinol Metab2015Porter C, Hurren NM, Cotter MV, Bhattarai N, Reidy PT, Dillon EL, Durham WJ, Tuvdendorj D, Sheffield-Moore M, Volpi E, Sidossis LS, Rasmussen BB, Børsheim E (2015) Mitochondrial respiratory capacity and coupling control decline with age in human skeletal muscle. Am J Physiol Endocrinol Metab 309:E224-32.LEAK
OXPHOS
ETS
F
N
NS
Other combinations
Permeabilized tissueHumanSkeletal muscle
Assmann 2014 PhD Thesis2015Assman N (2015) Impact of Fanconi-associated protein on the mitochonrial proteome. PhD Thesis 1-111.LEAK
ROUTINE
OXPHOS
ETS
F
N
S
CIV
NS
ROX
Intact cells
Permeabilized cells
PigKidney
Other cell lines
De Andrade 2015 Exp Cell Res2015de Andrade DC, de Carvalho SN, Pinheiro D, Thole AA, Moura AS, de Carvalho L, Cortez EA (2015) Bone marrow mononuclear cell transplantation improves mitochondrial bioenergetics in the liver of cholestatic rats. Exp Cell Res 336:15-22.LEAK
OXPHOS
F
NS
Permeabilized tissueRatLiver
Coupling control protocol2015Gnaiger E (2015) From PCP to CCP. Mitochondr Physiol Network 2015-01-11.LEAK
ROUTINE
OXPHOS
ETS
Wang 2015 Nat Commun2015Wang Y, Oxer D, Hekimi S (2015) Mitochondrial function and lifespan of mice with controlled ubiquinone biosynthesis. Nat Commun 6:6393.LEAK
OXPHOS
N
S
Isolated mitochondriaMouseHeart
Kidney
Skeletal muscle
Woodlief 2015 Obesity (Silver Spring)2015Woodlief TL, Carnero EA, Standley RA, Distefano G, Anthony SJ, Dubis GS, Jakicic JM, Houmard JA, Coen PM, Goodpaster BH (2015) Dose response of exercise training following roux-en-Y gastric bypass surgery: A randomized trial. Obesity (Silver Spring) 23:2454-61.LEAK
OXPHOS
ETS
N
NS
Permeabilized tissueHumanSkeletal muscle
Gainutdinov 2015 Arch Biochem Biophys2015Gainutdinov T, Molkentin JD, Siemen D, Ziemer M, Debska-Vielhaber G, Vielhaber S, Gizatullina Z, Orynbayeva Z, Gellerich FN (2015) Knockout of cyclophilin D in Ppif(-/-) mice increases stability of brain mitochondria against Ca(2+) stress. Arch Biochem Biophys 579:40-6.LEAK
OXPHOS
N
S
ROX
Isolated mitochondriaMouseNervous system
Cahill 2015 J Biol Chem2015Cahill TJ, Leo V, Kelly M, Stockenhuber A, Kennedy NW, Bao L, Cereghetti G, Harper AR, Czibik G, Lao C, Bellahcene M, Steeples V, Ghaffari S, Yavari A, Mayer A, Poulton J, Ferguson D, Scorrano L, Hettiarachchi NT, Peers C, Boyle J, Hill RB, Simmons A, Watkins H, Dear TN, Ashrafian H (2015) Resistance of dynamin-related protein 1 oligomers to disassembly impairs mitophagy resulting in myocardial inflammation and heart failure. J Biol Chem 290:25907-19.LEAK
OXPHOS
ETS
N
S
NS
ROX
Permeabilized tissueMouseHeart
Lages 2015 PeerJ2015Lages YM, Nascimento JM, Lemos GA, Galina A, Castilho LR, Rehen SK (2015) Low oxygen alters mitochondrial function and response to oxidative stress in human neural progenitor cells. PeerJ 3:e1486.ETS
LEAK
ROUTINE
ROXIntact cellsHumanStem cells
Canto 2015 Curr Protoc Mouse Biol2015Cantó C, Garcia-Roves PM (2015) High-resolution respirometry for mitochondrial characterization of ex vivo mouse tissues. Curr Protoc Mouse Biol 5:135-53.LEAK
OXPHOS
ETS
N
S
NS
Permeabilized tissue
Homogenate
MouseHeart
Skeletal muscle
Nervous system
Liver
Fat
Katunga 2015 Mol Metab2015Katunga LA, Gudimella P, Efird JT, Abernathy S, Mattox TA, Beatty C, Darden TM, Thayne KA, Alwair H, Kypson AP, Virag JA, Anderson EJ (2015) Obesity in a model of gpx4 haploinsufficiency uncovers a causal role for lipid-derived aldehydes in human metabolic disease and cardiomyopathy. Mol Metab 4:493-506.LEAK
OXPHOS
FPermeabilized tissueMouseHeart
Czerniczyniec 2015 Brain Res2015Czerniczyniec A, La Padula P, Bustamante J, Karadayian AG, Lores-Arnaiz S, Costa LE (2015) Mitochondrial function in rat cerebral cortex and hippocampus after short- and long-term hypobaric hypoxia. Brain Res 1598:66-75.LEAK
OXPHOS
NIsolated mitochondriaRatNervous system
Renner 2015 Eur J Immunol2015Renner K, Geiselhöringer AL, Fante M, Bruss C, Färber S, Schönhammer G, Peter K, Singer K, Andreesen R, Hoffmann P, Oefner P, Herr W, Kreutz M (2015) Metabolic plasticity of human T cells: Preserved cytokine production under glucose deprivation or mitochondrial restriction, but 2-deoxy-glucose affects effector functions. Eur J Immunol 45:2504-16.LEAK
ROUTINE
ETS
Intact cellsHumanBlood cells
Lymphocyte
Skemiene 2015 FEBS J2015Skemiene K, Liobikas J, Borutaite V (2015) Anthocyanins as substrates for mitochondrial complex I - protective effect against heart ischemic injury. FEBS J 282:963-71.LEAK
OXPHOS
N
S
Isolated mitochondriaRatHeart
Dungel 2015 Free Radic Biol Med2015Dungel P, Perlinger M, Weidinger A, Redl H, Kozlov AV (2015) The cytoprotective effect of nitrite is based on the formation of dinitrosyl iron complexes. Free Radic Biol Med 89:300-10.ETS
LEAK
OXPHOS
N
S
Isolated mitochondriaRatLiver
Jeger 2015 BioMed Res Internat2015Jeger V, Brandt S, Porta F, Jakob SM, Takala J, Djafarzadeh S (2015) Dose response of Endotoxin on hepatocyte and muscle mitochondrial respiration in vitro. BioMed Res Internat Article ID 353074:1-13.LEAK
ROUTINE
OXPHOS
ETS
N
S
CIV
NS
ROX
Intact cells
Permeabilized cells
Isolated mitochondria
HumanSkeletal muscle
Liver
Other cell lines
Grevengoed 2015 J Lipid Res2015Grevengoed TJ, Martin SA, Katunga L, Cooper DE, Anderson EJ, Murphy RC, Coleman RA (2015) Acyl-CoA synthetase 1 deficiency alters cardiolipin species and impairs mitochondrial function. J Lipid Res 56:1572-82.LEAK
OXPHOS
F
N
NS
ROX
Permeabilized tissueMouseHeart
Other cell lines
HEK
Gram 2015 J Physiol2015Gram M, Vigelsø A, Yokota T, Helge JW, Dela F, Hey-Mogensen M (2015) Skeletal muscle mitochondrial H2O2 emission increases with immobilization and decreases after aerobic training in young and older men. J Physiol 593:4011-27.LEAK
OXPHOS
N
S
Isolated mitochondriaHumanSkeletal muscle
Ziak 2015 Mitochondrion2015Ziak J, Krajcova A, Jiroutkova K, Nemcova V, Dzupa V, Duska F (2015) Assessing the function of mitochondria in cytosolic context in human skeletal muscle: Adopting high-resolution respirometry to homogenate of needle biopsy tissue samples. Mitochondrion 21:106-12.LEAK
OXPHOS
ETS
N
S
NS
ROX
Homogenate
Isolated mitochondria
HumanSkeletal muscle
Ludzki 2015 Diabetes2015Ludzki A, Paglialunga S, Smith BK, Herbst EA, Allison MK, Heigenhauser GJ, Neufer PD, Holloway GP (2015) Rapid repression of ADP transport by palmitoyl-CoA is attenuated by exercise training in humans; a potential mechanism to decrease oxidative stress and improve skeletal muscle insulin signaling. Diabetes 64:2769-79.LEAK
OXPHOS
F
N
NS
Permeabilized tissueHuman
Mouse
Skeletal muscle
Porter 2015 Burns2015Porter C, Herndon DN, Bhattarai N, Ogunbileje JO, Szczesny B, Szabo C, Toliver-Kinsky T, Sidossis LS (2015) Differential acute and chronic effects of burn trauma on murine skeletal muscle bioenergetics. Burns 42:112-22.LEAK
OXPHOS
ETS
NS
Other combinations
Permeabilized tissueMouseSkeletal muscle
Vincent 2015 Front Physiol2015Vincent G, Lamon S, Gant N, Vincent PJ, MacDonald JR, Markworth JF, Edge JA, Hickey AJ (2015) Changes in mitochondrial function and mitochondria associated protein expression in response to 2-weeks of high intensity interval training. Front Physiol 6:51.LEAK
OXPHOS
ETS
N
S
ROX
Permeabilized tissueHumanSkeletal muscle
Du 2015 J Biol Chem2015Du J, Rountree A, Cleghorn WM, Contreras L, Lindsay KJ, Sadilek M, Gu H, Djukovic D, Raftery D, Satrustegui J, Kanow M, Chan L, Tsang SH, Sweet IR, Hurley JB (2015) Phototransduction influences metabolic flux and nucleotide metabolism in mouse retina. J Biol Chem 291:4698-710.LEAK
ROUTINE
OXPHOS
ETS
N
ROX
Isolated mitochondriaMouseNervous system
Islet cell;pancreas;thymus
Desprat 2015 Thesis2015Desprat JL, Teulier L, Puijalon S, Romestaing C, Dumet A, Lengagne T, Mondy N (2015) Caloric restriction and testosterone affect mitochondrial functioning and contractile properties of calling muscles in Hyla arborea.. Doctoral Thesis p153.LEAK
OXPHOS
F
NS
Permeabilized tissueAmphibiansSkeletal muscle
Antoun 2015 JIMD Rep2015Antoun G, McBride S, Vanstone JR, Naas T, Michaud J, Redpath S, McMillan HJ, Brophy J, Daoud H, Chakraborty P, Dyment D, Holcik M, Harper ME, Lines MA (2015) Detailed biochemical and bioenergetic characterization of FBXL4-related encephalomyopathic mitochondrial DNA depletion. JIMD Rep 27:1-9.LEAK
OXPHOS
ETS
F
N
S
CIV
NS
ROX
Permeabilized tissueHumanSkeletal muscle
Johnson 2015 Aging Cell2015Johnson ML, Lalia AZ, Dasari S, Pallauf M, Fitch M, Hellerstein MK, Lanza IR (2015) Eicosapentaenoic acid but not docosahexaenoic acid restores skeletal muscle mitochondrial oxidative capacity in old mice. Aging Cell 14:734-43.LEAK
OXPHOS
F
N
S
NS
ROX
Isolated mitochondriaMouseSkeletal muscle
Melo Hanchuk 2015 Cell Signal2015Melo Hanchuk TD, Papa PF, La Guardia PG, Vercesi AE, Kobarg J (2015) Nek5 interacts with mitochondrial proteins and interferes negatively in mitochondrial mediated cell death and respiration. Cell Signal 27:1168-77.LEAK
OXPHOS
N
S
CIV
ROX
Permeabilized cellsHumanHEK
Van Ewijk 2015 Obesity (Silver Spring)2015van Ewijk PA, Paglialunga S, Kooi ME, Nunes PM, Gemmink A, Slenter J, Kornips E, Jörgensen JA, Hoeks J, Wildberger JE, Hesselink MK, Glatz JF, Heerschap A, Kersten S, Schrauwen P, Schrauwen-Hinderling VB (2015) Effects of high-fat feeding on ectopic fat storage and postprandial lipid metabolism in mouse offspring. Obesity (Silver Spring) 23:2242-50.LEAK
OXPHOS
F
N
Isolated mitochondriaMouseHeart
Liver
Khera 2015 Placenta2015Khera A, Dong LF, Holland O, Vanderlelie J, Pasdar EA, Neuzil J, Perkins AV (2015) Selenium supplementation induces mitochondrial biogenesis in trophoblasts. Placenta 36:863-9.LEAK
ROUTINE
OXPHOS
ETS
N
S
CIV
Intact cells
Permeabilized cells
HumanGenital
Other cell lines
Ortiz 2015 J Pineal Res2015Ortiz F, Acuña-Castroviejo D, Doerrier C, Dayoub JC, López LC, Venegas C, García JA, López A, Volt H, Luna-Sánchez M, Escames G (2015) Melatonin blunts the mitochondrial/NLRP3 connection and protects against radiation-induced oral mucositis. J Pineal Res 58:34-49.LEAK
OXPHOS
ETS
N
S
Homogenate
Isolated mitochondria
Grabez 2015 J Anim Sci2015Grabež V, Kathri M, Phung V, Moe KM, Slinde E, Skaugen M, Saarem K, Egelandsdal B (2015) Protein expression and oxygen consumption rate of early postmortem mitochondria relate to meat tenderness. J Anim Sci 93:1967-79.LEAK
OXPHOS
ETS
F
N
S
NS
Other combinations
ROX
Permeabilized tissueBovinesSkeletal muscle
Maiti 2015 PhD Thesis2015Maiti P (2015) The role of caseinolytic mitochondrial matrix peptidase proteolytic subunit (CLPP) in regulation of mitochondrial ribosome biogenesis in mammals. PhD Thesis 1-120.LEAK
OXPHOS
ETS
N
S
NS
ROX
Isolated mitochondriaMouseHeart
OXPHOS coupling efficiency2015Gnaiger E (2015) Cell ergometry: OXPHOS and ETS coupling efficiency. Mitochondr Physiol Network 2015-01-18.LEAK
OXPHOS
Hecker 2015 Methods Mol Biol2015Hecker M, Sommer N, Mayer K (2015) Assessment of short- and medium-chain fatty acids on mitochondrial function in severe Inflammation. Methods Mol Biol 1265:389-96.LEAK
ROUTINE
ETS
ROXIntact cellsHumanEndothelial;epithelial;mesothelial cell
Hagl 2015 Molecules2015Hagl S, Berressem D, Bruns B, Sus N, Frank J, Eckert GP (2015) Beneficial Effects of Ethanolic and Hexanic Rice Bran Extract on Mitochondrial Function in PC12 Cells and the Search for Bioactive Components. Molecules 20(9):16524-39.LEAK
ROUTINE
OXPHOS
ETS
N
S
CIV
NS
ROX
Permeabilized cellsRatNervous system
Other cell lines
Park 2015 Proc Natl Acad Sci USA2015Park JH, Kang HJ, Lee YK, Kang H, Kim J, Chung JH, Chang JS, McPherron AC, Lee SB (2015) Inactivation of EWS reduces PGC-1α protein stability and mitochondrial homeostasis. Proc Natl Acad Sci USA 112:6074-9.LEAK
ROUTINE
ETS
ROXIntact cellsMouseFat
Patil 2015 J Nutr Biochem2015Patil YN, Dille KN, Burk DH, Cortez CC, Gettys TW (2015) Cellular and molecular remodeling of inguinal adipose tissue mitochondria by dietary methionine restriction. J Nutr Biochem 26:1235-47.LEAK
OXPHOS
ETS
F
N
S
Gp
ROX
Isolated mitochondriaMouseSkeletal muscle
Liver
Fat
Christiansen 2015 J Vet Med Sci2015Christiansen LB, Dela F, Koch J, Yokota T (2015) Tissue-specific and substrate-specific mitochondrial bioenergetics in feline cardiac and skeletal muscles. J Vet Med Sci 77:669-75.LEAK
OXPHOS
ETS
F
N
S
CIV
NS
Other combinations
ROX
Permeabilized tissueCatHeart
Skeletal muscle
Labieniec-Watala 2015 Int J Pharm Sci Res2015Labieniec-Watala M, Przygodzki T, Siewiera K, Podsedek A, Watala C (2015) Facts and artifacts in the evaluation of the anti-diabetic activity of spent hop extract in rat hearts in the “experimental model of diabetes. Int J Pharm Sci Res 1:106.LEAK
OXPHOS
ETS
S
ROX
Isolated mitochondriaRatHeart
Kucera 2015 Oxid Med Cell Longev2015Kucera O, Mezera V, Moravcova A, Endlicher R, Lotkova H, Drahota Z, Cervinkova Z (2015) In vitro toxicity of epigallocatechin gallate in rat liver mitochondria and hepatocytes. Oxid Med Cell Longev 2015:476180.LEAK
OXPHOS
N
S
Intact cells
Isolated mitochondria
RatLiver
Coen 2015 Diabetes2015Coen PM, Menshikova EV, Distefano G, Zheng D, Tanner CJ, Standley RA, Helbling NL, Dubis GS, Ritov VB, Xie H, Desimone ME, Smith SR, Stefanovic-Racic M, Toledo FG, Houmard JA, Goodpaster BH (2015) Exercise and weight loss improve muscle mitochondrial respiration, lipid partitioning, and insulin sensitivity after gastric bypass surgery. Diabetes 64:3737-50.ETS
LEAK
OXPHOS
F
N
NS
Other combinations
Permeabilized tissueHumanSkeletal muscle
Silachev 2015 Chem Biol Interact2015Silachev DN, Gulyaev MV, Zorova LD, Khailova LS, Gubsky LV, Pirogov YA, Plotnikov EY, Sukhikh GT, Zorov DB (2015) Magnetic resonance spectroscopy of the ischemic brain under lithium treatment. Link to mitochondrial disorders under stroke. Chem Biol Interact 237:175-82.LEAK
OXPHOS
SIsolated mitochondriaRatNervous system
Ruiz-Perez 2015 J Biol Chem2015Ruiz-Pérez MV, Medina MÁ, Urdiales JL, Keinänen TA, Sánchez-Jiménez F (2015) Polyamine metabolism is sensitive to glycolysis inhibition in human neuroblastoma cells. J Biol Chem 290:6106-19.LEAK
ROUTINE
ETS
ROXIntact cellsHumanNervous system
Other cell lines
Neuroblastoma
Ikaga 2015 Biochem Biophys Rep2015Ikaga R, Namekatac I, Kotiadisd VN, Ogawab H, Duchend MR, Tanakac H, Iida-Tanakab N (2015) Knockdown of aquaporin-8 induces mitochondrial dysfunction in 3T3-L1 cells. Biochem Biophys Rep 4:187–95.ETS
LEAK
ROUTINE
CIV
ROX
Intact cellsMouseFat
Other cell lines
Hansson 2015 Eur J Pharmacol2015Hansson MJ, Llwyd O, Morin D, de Paulis D, Arnoux T, Gouarné C, Koul S, Engblom H, Bordet T, Tissier R, Arheden H, Erlinge D, Halestrap AP, Berdeaux A, Pruss RM, Schaller S (2015) Differences in the profile of protection afforded by TRO40303 and mild hypothermia in models of cardiac ischemia/reperfusion injury. Eur J Pharmacol 760:7-19.LEAK
OXPHOS
ETS
N
S
NS
Permeabilized tissuePigHeart
Krumschnabel 2015 Methods Mol Biol2015
O2k-Protocols contents
Krumschnabel G, Fontana-Ayoub M, Sumbalova Z, Heidler J, Gauper K, Fasching M, Gnaiger E (2015) Simultaneous high-resolution measurement of mitochondrial respiration and hydrogen peroxide production. Methods Mol Biol 1264:245-61.
LEAK
OXPHOS
ETS
N
S
NS
ROX
Isolated mitochondriaMouseNervous system
Iftikar 2015 Comp Biochem Physiol A Mol Integr Physiol2015Iftikar FI, Morash AJ, Cook DG, Herbert NA, Hickey AJ (2015) Temperature acclimation of mitochondria function from the hearts of a temperate wrasse (Notolabrus celidotus). Comp Biochem Physiol A Mol Integr Physiol 184:46-55.ETS
LEAK
OXPHOS
CIV
N
NS
ROX
S
Permeabilized tissueFishesHeart
Moore 2015 PhD Thesis2015Moore D (2015) Biostabilization of lipid bilayers: dealing with water stress in embryos of Artemia franciscana. PhD Thesis 1-111.LEAK
OXPHOS
ETS
SIsolated mitochondriaRatLiver
Pasdar 2015 PLoS One2015Pasdar EA, Smits M, Stapelberg M, Bajzikova M, Stantic M, Goodwin J, Yan B, Stursa J, Kovarova J, Sachaphibulkij K, Bezawork-Geleta A, Sobol M, Filimonenko A, Tomasetti M, Zobalova R, Hozak P, Dong LF, Neuzil J (2015) Characterisation of mesothelioma-initiating cells and their susceptibility to anti-cancer agents. PLoS One 10:e0119549.LEAK
ROUTINE
OXPHOS
ETS
N
S
NS
Intact cells
Permeabilized cells
Human
Mouse
Endothelial;epithelial;mesothelial cell
Other cell lines
Banh 2015 Comp Biochem Physiol B Biochem Mol Biol2015Banh S, Wiens L, Sotiri E, Treberg JR (2015) Mitochondrial reactive oxygen species production by fish muscle mitochondria: Potential role in acute heat-induced oxidative stress. Comp Biochem Physiol B Biochem Mol Biol 191:99-107.LEAK
OXPHOS
SIsolated mitochondriaRat
Fishes
Skeletal muscle
Khiati 2015 Proc Natl Acad Sci U S A2015Khiati S, Baechler SA, Factor VM, Zhang H, Huang SY, Dalla Rosa I, Sourbier C, Neckers L, Thorgeirsson SS, Pommier Y (2015) Lack of mitochondrial topoisomerase I (TOP1mt) impairs liver regeneration. Proc Natl Acad Sci U S A 112:11282-7.LEAK
ROUTINE
ETS
Intact cellsHumanEndothelial;epithelial;mesothelial cell
Other cell lines
Den Besten 2015 Diabetes2015den Besten G, Bleeker A, Gerding A, van Eunen K, Havinga R, van Dijk TH, Oosterveer MH, Jonker JW, Groen AK, Reijngoud DJ, Bakker BM (2015) Short-chain fatty acids protect against high-fat diet-induced obesity via a PPARγ-dependent switch from lipogenesis to fat oxidation. Diabetes 64:2398-408.LEAK
OXPHOS
FIsolated mitochondriaMouseLiver
Plecita-Hlavata 2015 J Bioenerg Biomembr2015Plecitá-Hlavatá L, Ježek J, Ježek P (2015) Aglycemia keeps mitochondrial oxidative phosphorylation under hypoxic conditions in HepG2 cells. J Bioenerg Biomembr 47(6):467-76.LEAK
ROUTINE
ETS
Intact cellsHumanLiver
Hezel 2015 Redox Biol2015Hezel MP, Liu M, Schiffer TA, Larsen FJ, Checa A, Wheelock CE, Carlström M, Lundberg JO, Weitzberg E (2015) Effects of long-term dietary nitrate supplementation in mice. Redox Biol 5:234-42.LEAK
OXPHOS
ETS
NIsolated mitochondriaMouseSkeletal muscle
Dueregger 2015 PLoS One2015Dueregger A, Schöpf B, Eder T, Höfer J, Gnaiger E, Aufinger A, Kenner L, Perktold B, Ramoner R, Klocker H, Eder IE (2015) Differential utilization of dietary fatty acids in benign and malignant cells of the prostate. PLoS One 10(8):e0135704.LEAK
ROUTINE
OXPHOS
ETS
F
N
NS
ROX
Permeabilized cells
Permeabilized tissue
HumanGenital
Other cell lines
Hey-Mogensen 2015 J Physiol2015Hey-Mogensen M, Gram M, Jensen MB, Lund MT, Hansen CN, Scheibye-Knudsen M, Bohr VA, Dela F (2015) A novel method for determining human ex vivo submaximal skeletal muscle mitochondrial function. J Physiol 593:3991-4010.LEAK
OXPHOS
N
S
Isolated mitochondriaHumanSkeletal muscle
Bonsignore 2015 Mech Ageing Dev2015Bonsignore LA, Tooley JG, Van Hoose PM, Wang E, Cheng A, Cole MP, Schaner Tooley CE (2015) NRMT1 knockout mice exhibit phenotypes associated with impaired DNA repair and premature aging. Mech Ageing Dev 146-148:42-52.LEAK
OXPHOS
ETS
N
ROX
Isolated mitochondriaMouseLiver
Bowen 2015 Eur J Heart Fail2015Bowen TS, Rolim NP, Fischer T, Baekkerud FH, Medeiros A, Werner S, Brønstad E, Rognmo O, Mangner N, Linke A, Schuler G, Silva GJ, Wisløff U, Adams V (2015) Heart failure with preserved ejection fraction induces molecular, mitochondrial, histological, and functional alterations in rat respiratory and limb skeletal muscle. Eur J Heart Fail 17:263-72.LEAK
OXPHOS
ETS
N
NS
Permeabilized tissueRatSkeletal muscle
Lehtola 2015 Master's Thesis2015Lehtola A (2015) Main protein component of high density lipoprotein, apolipoprotein A1, modulates leukocyte cell respiration. Master's Thesis 1-44.LEAK
ROUTINE
OXPHOS
ETS
N
S
NS
ROX
Intact cells
Permeabilized cells
HumanBlood cells
Other cell lines
Lymphocyte
Darrah-Wiedemeier 2015 Graduate Theses and Dissertations2015Darrah-Wiedemeier KL (2015) The physiological effects of the seed treatment Stamina on maize seedling length, ADP:O ratios, and respiration rates. Graduate Theses and Dissertations Paper 14673:55 pp.LEAK
OXPHOS
SIsolated mitochondriaPlants
Koliaki 2015 Cell Metab2015Koliaki C, Szendroedi J, Kaul K, Jelenik T, Nowotny P, Jankowiak F, Herder C, Carstensen M, Krausch M, Knoefel WT, Schlensak M, Roden M (2015) Adaptation of hepatic mitochondrial function in humans with non-alcoholic fatty liver is lost in steatohepatitis. Cell Metab 21:739-46.LEAK
OXPHOS
ETS
F
N
NS
Other combinations
ROX
Homogenate
Isolated mitochondria
HumanLiver
Warne 2015 J Biol Chem2015Warne J, Pryce G, Hill J, Shi X, Lennerås F, Puentes F, Kip M, Hilditch L, Walker P, Simone MI, Chan AW, Towers GJ, Coker A, Duchen MR, Szabadkai G, Baker D, Selwood D (2015) Selective inhibition of the mitochondrial permeability transition pore protects against neuro-degeneration in experimental multiple sclerosis. J Biol Chem 291:4356-73.LEAK
OXPHOS
ETS
N
ROX
Isolated mitochondriaMouseLiver
Van Hoose 2015 Thesis2015Van Hoose P (2015) Co-treatment with conjugated linoleic acid and nitrite modulates mitochondrial respiration and electron transport chain activity in vivo and attenuates mitochondrial dysfunction during cardiac injury. Dissertations p128.LEAK
OXPHOS
ETS
Isolated mitochondriaMouseHeart
Venter 2015 J Clin Cell Immunol2015Venter G, Wijers M, Oerlemans FTJJ, Manjeri G, Fransen JAM, Wieringa B (2015) Glycolytic metabolism is differentially coupled to proliferative potential and morphodynamic capacity in RAW 264.7 and Mafb/C-Maf deficient macrophage lineages. J Clin Cell Immunol 6:1-11.LEAK
ROUTINE
ETS
ROXMouseBlood cells
Macrophage-derived
Ziemer 2015 Dissertation2015Ziemer M (2015) Untersuchungen zur Aktivität der mitochondrialen Permeabilitätstransitionspore in der Cyclophilin-D-Knock-out-Maus (Ppif-/-). Dissertation 1-72.LEAK
OXPHOS
NIsolated mitochondriaMouseLiver
Konopka 2015 Diabetes2015Konopka AR, Asante A, Lanza IR, Robinson MM, Johnson ML, Dalla Man C, Cobelli C, Amols MH, Irving BA, Nair KS (2015) Defects in mitochondrial efficiency and H2O2 emissions in obese women are restored to a lean phenotype with aerobic exercise training. Diabetes 64:2104-15.LEAK
OXPHOS
ETS
N
S
NS
ROX
Isolated mitochondriaHumanSkeletal muscle
Christiansen 2015 Am J Physiol Heart Circ Physiol2015Christiansen LB, Dela F, Koch J, Hansen CN, Leifsson PS, Yokota T (2015) Impaired cardiac mitochondrial oxidative phosphorylation and enhanced mitochondrial oxidative stress in feline hypertrophic cardiomyopathy. Am J Physiol Heart Circ Physiol 308:H1237-47.LEAK
OXPHOS
ETS
F
N
S
CIV
NS
ROX
Permeabilized tissue
Isolated mitochondria
CatHeart
Skeletal muscle
Hanssen 2015 Diabetologia2015Hanssen MJ, Wierts R, Hoeks J, Gemmink A, Brans B, Mottaghy FM, Schrauwen P, van Marken Lichtenbelt WD (2015) Glucose uptake in human brown adipose tissue is impaired upon fasting-induced insulin resistance. Diabetologia 58:586-95.LEAK
ETS
FIsolated mitochondriaHumanSkeletal muscle
Schoettl 2015 Mol Metab2015Schöttl T, Kappler L, Fromme T, Klingenspor M (2015) Limited OXPHOS capacity in white adipocytes is a hallmark of obesity in laboratory mice irrespective of the glucose tolerance status. Mol Metab 4:631-42.LEAK
ROUTINE
OXPHOS
ETS
F
N
S
ROX
Intact cells
Isolated mitochondria
MouseFat
Other cell lines
Makrecka-Kuka 2015 Biomolecules2015
O2k-Protocols contents
Makrecka-Kuka M, Krumschnabel G, Gnaiger E (2015) High-resolution respirometry for simultaneous measurement of oxygen and hydrogen peroxide fluxes in permeabilized cells, tissue homogenate and isolated mitochondria. Biomolecules 5:1319-38.
LEAK
ROUTINE
OXPHOS
ETS
N
S
NS
ROX
Intact cells
Permeabilized cells
Homogenate
Isolated mitochondria
Human
Mouse
Heart
Nervous system
HEK
ETS coupling efficiency2015Gnaiger E (2015) Biochemical coupling efficiency: from 0 to <1. Mitochondr Physiol Network 2015-01-18.LEAK
ETS
Laursen 2015 Proc Natl Acad Sci USA2015Laursen WJ, Mastrotto M, Pesta D, Funk OH, Goodman JB, Merriman DK, Ingolia N, Shulman GI, Bagriantsev SN, Gracheva EO (2015) Neuronal UCP1 expression suggests a mechanism for local thermogenesis during hibernation. Proc Natl Acad Sci USA 112:1607-12.LEAK
OXPHOS
NIsolated mitochondriaOther mammalsNervous system
HEK
Hagl 2015 Neurochem Int2015Hagl S, Kocher A, Schiborr C, Kolesova N, Frank J, Eckert GP (2015) Curcumin micelles improve mitochondrial function in neuronal PC12 cells and brains of NMRI mice - Impact on bioavailability. Neurochem Int 89:234-42.ETS
LEAK
OXPHOS
CIV
N
S
Isolated mitochondriaMouseNervous system
Wahrheit 2015 Eng Life Sci2015Wahrheit J, Nonnenmacher Y, Sperber S, Heinzle E (2015) High-throughput respiration screening of single mitochondrial substrates using permeabilized CHO cells highlights control of mitochondria metabolism. Eng Life Sci 15:184-94.LEAK
OXPHOS
N
S
ROX
Permeabilized cellsOther mammalsGenital
Plecita-Hlavata 2015 Am J Respir Cell Mol Biol2015Plecitá-Hlavatá L, Tauber J, Li M, Zhang H, Flockton AR, Pullamsetti SS, Chelladurai P, D'alessandro A, El Kasmi KC, Ježek P, Stenmark KR (2015) Constitutive reprogramming of fibroblast mitochondrial metabolism in pulmonary hypertension. Am J Respir Cell Mol Biol 55:47-57.LEAK
ROUTINE
OXPHOS
ETS
N
CIV
Other combinations
Intact cells
Isolated mitochondria
Human
Bovines
Endothelial;epithelial;mesothelial cell
Fibroblast
Llobet 2015 Dis Model Mech2015Llobet L, Toivonen JM, Montoya J, Ruiz-Pesini E, López-Gallardo E (2015) OXPHOS xenobiotics alter adipogenic differentiation at concentrations found in human blood. Dis Model Mech 8:1441-55.LEAK
ROUTINE
ETS
Intact cellsHumanFat
Stem cells
Schwarzkopf 2015 Neuroscience2015Schwarzkopf TM, Koch K, Klein J (2015) Reduced severity of ischemic stroke and improvement of mitochondrial function after dietary treatment with the anaplerotic substance triheptanoin. Neuroscience 300:201-9.LEAK
OXPHOS
ETS
N
S
CIV
NS
ROX
Isolated mitochondriaMouseNervous system
Jiroutkova 2015 Crit Care2015Jiroutková K, Krajčová A, Ziak J, Fric M, Waldauf P, Džupa V, Gojda J, Němcova-Fürstová V, Kovář J, Elkalaf M, Trnka J, Duška F (2015) Mitochondrial function in skeletal muscle of patients with protracted critical illness and ICU-acquired weakness. Crit Care 19:448.LEAK
OXPHOS
ETS
N
S
Gp
CIV
NS
Other combinations
ROX
HomogenateHumanSkeletal muscle
Joergensen 2015 J Cereb Blood Flow Metab2015Jørgensen T, Grunnet N, Quistorff B (2015) One-year high fat diet affects muscle-but not brain mitochondria. J Cereb Blood Flow Metab 35:943-50.LEAK
OXPHOS
F
N
S
Other combinations
Isolated mitochondriaRatSkeletal muscle
Nervous system
Lisak 2015 Cell Death Differ2015Lisak D, Schacht T, Gawlitza A, Albrecht P, Aktas O, Koop B, Gliem M, Hofstetter HH, Zanger K, Bultynck G, Parys JB, De Smedt H, Kindler T, Adams-Quack P, Hahn M, Waisman A, Reed JC, Hövelmeyer N, Methner A (2015) BAX inhibitor-1 is a Ca2+ channel critically important for immune cell function and survival. Cell Death Differ 23:358-68.LEAK
ROUTINE
ETS
ROXIntact cellsMouseBlood cells
Lymphocyte
Du 2015 Aquat Toxicol2015Du X, Crawford DL, Oleksiak MF (2015) Effects of anthropogenic pollution on the oxidative phosphorylation pathway of hepatocytes from natural populations of Fundulus heteroclitus. Aquat Toxicol 165:231-40.LEAK
OXPHOS
ETS
N
S
CIV
ROX
Permeabilized cellsFishesLiver
MiPNet12.01 Suppl T-issue2014-07-20
O2k-Protocols contents
MitoPathways at the Q-junction: mouse skeletal muscle fibres.
LEAK
ROUTINE
ETS
N
S
NS
ROX
Permeabilized tissueMouseSkeletal muscle
MiPNet12.11 MitoRespiration2014-02-20
O2k-Protocols
Flux control ratios in isolated mitochondria. OXPHOS capacity and respiratory control.
LEAK
OXPHOS
ETS
SIsolated mitochondriaArtemia
Crustaceans
Hort 2014 Biochimie2014Hort MA, Straliotto MR, de Oliveira J, Amoêdo ND, da Rocha JB, Galina A, Ribeiro-do-Valle RM, de Bem AF (2014) Diphenyl diselenide protects endothelial cells against oxidized low density lipoprotein-induced injury: Involvement of mitochondrial function. Biochimie 105:172-81.LEAK
ROUTINE
ETS
Intact cellsBovinesOther cell lines
DeLany 2014 J Clin Endocrinol Metab2014DeLany JP, Dube JJ, Standley RA, Distefano G, Goodpaster BH, Stefanovic-Racic M, Coen PM, Toledo FG (2014) Racial differences in peripheral insulin sensitivity and mitochondrial capacity in the absence of obesity. J Clin Endocrinol Metab 99:4307-14.LEAK
OXPHOS
ETS
Other combinationsPermeabilized tissueHumanSkeletal muscle
Onukwufor 2013 J Exp Biol2014Onukwufor JO, Macdonald N, Kibenge F, Stevens D, Kamunde C (2013) Hypoxia-cadmium interactions on rainbow trout (Oncorhynchus mykiss) mitochondrial bioenergetics: attenuation of hypoxia-induced proton leak by low doses of cadmium. J Exp Biol 217:831-40.LEAK
OXPHOS
ETS
NIsolated mitochondriaFishesLiver
Schlagowski 2014 J Appl Physiol2014Schlagowski AI, Singh F, Charles AL, Gali Ramamoorthy T, Favret F, Piquard F, Geny B, Zoll J (2014) Mitochondrial uncoupling reduces exercise capacity despite several skeletal muscle metabolic adaptations. J Appl Physiol 116:364-75.LEAK
OXPHOS
NSPermeabilized cellsRatSkeletal muscle
Fisar 2014 Toxicol Lett2014Fišar Z, Singh N, Hroudová J (2014) Cannabinoid-induced changes in respiration of brain mitochondria. Toxicol Lett 231:62-71.LEAK
OXPHOS
ETS
N
S
CIV
ROX
Isolated mitochondriaPigNervous system
Gouspillou 2014 FASEB J2014Gouspillou G, Sgarioto N, Kapchinsky S, Purves-Smith F, Norris B, Pion CH, Barbat-Artigas S, Lemieux F, Taivassalo T, Morais JA, Aubertin-Leheudre M, Hepple RT (2014) Increased sensitivity to mitochondrial permeability transition and myonuclear translocation of endonuclease G in atrophied muscle of physically active older humans. FASEB J 28:1621-33.LEAK
OXPHOS
N
NS
Permeabilized tissueHumanSkeletal muscle
Pham 2014 Am J Physiol2014Pham T, Loiselle D, Power A, Hickey AJ (2014) Mitochondrial inefficiencies and anoxic ATP hydrolysis capacities in diabetic rat heart. Am J Physiol 307:C499–507.LEAK
OXPHOS
ETS
N
NS
ROX
HomogenateRatHeart
Hirzel 2014 PhD Thesis2014Hirzel E (2014) Characterization of human bone marrow derived mesenchymal stem cells as a model for in vitro adipocytes studies. PhD Thesis 1-106.LEAK
ROUTINE
OXPHOS
ETS
N
NS
Intact cells
Permeabilized cells
HumanFat
Other cell lines
Castelein 2014 Exp Gerontol2014Castelein N, Muschol M, Dhondt I, Cai H, De Vos WH, Dencher NA, Braeckman BP (2014) Mitochondrial efficiency is increased in axenically cultured Caenorhabditis elegans. Exp Gerontol 56:26-36.LEAK
OXPHOS
ETS
N
S
NS
Isolated mitochondriaCaenorhabditis elegans
Soltysinska 2014 PLoS One2014Soltysinska E, Bentzen BH, Barthmes M, Hattel H, Thrush AB, Harper ME, Qvortrup K, Larsen FJ, Schiffer TA, Losa-Reyna J, Straubinger J, Kniess A, Thomsen MB, Brüggemann A, Fenske S, Biel M, Ruth P, Wahl-Schott C, Boushel RC, Olesen SP, Lukowski R (2014) KCNMA1 encoded cardiac BK channels afford protection against ischemia-reperfusion injury. PLoS One 9:e103402.LEAK
OXPHOS
N
NS
ROX
Permeabilized tissue
Isolated mitochondria
MouseHeart
Skeletal muscle
Li 2014 Mol Cell Biol2014Li S, Yao Y, Xu R, Pesenti S, Cottet-Rousselle C, Rieusset J, Tokarska-Schlattner M, Liao K, Schlattner U, Rousseau D (2014) ATAD3 is a limiting factor in mitochondrial biogenesis and adipogenesis of white adipocyte-like 3T3-L1 cells. Mol Cell Biol [Epub ahead of print].LEAK
OXPHOS
N
S
Permeabilized cellsMouseFat
Other cell lines
Stokich 2014 Cryobiology2014Stokich B, Osgood Q, Grimm D, Moorthy S, Chakraborty N, Menze MA (2014) Cryopreservation of hepatocyte (HepG2) cell monolayers: Impact of trehalose. Cryobiology 69:281-90.LEAK
OXPHOS
N
S
NS
ROX
Permeabilized cellsHumanLiver
Kiss 2014 FASEB J2014Kiss G, Konrad C, Pour-Ghaz I, Mansour JJ, Németh B, Starkov AA, Adam-Vizi V, Chinopoulos C (2014) Diaphorases provide NAD+ in anoxia. FASEB J 28:1682-97.LEAK
OXPHOS
Isolated mitochondriaMouseLiver
Den Hollander 2014 Toxicol Sci2014den Hollander B, Sundström M, Pelander A, Ojanperä I, Mervaala E, Korpi ER, Kankuri E (2014) Keto amphetamine toxicity - focus on the redox reactivity of the cathinone designer drug mephedrone. Toxicol Sci 141:120-31.LEAK
OXPHOS
ETS
N
S
NS
ROX
HomogenateMouseNervous system
Larsen 2014 Biochim Biophys Acta2014Larsen S, Díez-Sánchez C, Rabøl R, Royo IA, Dela F, Helge JW (2014) Increased intrinsic mitochondrial function in humans with mitochondrial haplogroup H. Biochim Biophys Acta 1837:226-31.LEAK
OXPHOS
N
NS
ROX
Permeabilized tissueHumanSkeletal muscle
Tretter 2014 Free Radic Biol Med2014Tretter L, Horvath G, Hölgyesi A, Essek F, Adam-Vizi V (2014) Enhanced hydrogen peroxide generation accompanies the beneficial bioenergetic effects of methylene blue in isolated brain mitochondria. Free Radic Biol Med 77:317-30.LEAK
OXPHOS
N
S
Gp
Isolated mitochondriaGuinea pigNervous system
Sonkar 2014 FASEB J2014Sonkar VK, Kulkarni PP, Dash D (2014) Amyloid beta peptide stimulates platelet activation through RhoA-dependent modulation of actomyosin organization. FASEB J 28:1819-29.LEAK
ROUTINE
ROXIntact cellsHuman
Mouse
Blood cells
Platelet
Felser 2014 Toxicology II2014Felser A, Lindinger PW, Schnell D, Kratschmar DV, Odermatt A, Mies S, Jenö P, Krähenbühl S (2014) Hepatocellular toxicity of benzbromarone: effects on mitochondrial function and structure. Toxicology 324:136-46.LEAK
ROUTINE
OXPHOS
ETS
N
S
ROX
Intact cellsHumanLiver
Other cell lines
Ambrosio 2014 Free Radic Biol Med2014Ambrosio F, Brown E, Stolz D, Ferrari R, Goodpaster BH, Deasy B, Distefano G, Roperti A, Cheikhi A, Garciafigueroa Y, Barchowsky A (2014) Arsenic induces sustained impairment of skeletal muscle and muscle progenitor cell ultrastructure and bioenergetics. Free Radic Biol Med 74C:64-73.LEAK
OXPHOS
ETS
F
N
NS
Permeabilized tissueMouseSkeletal muscle
Lou 2014 PLoS One2014Lou PH, Lucchinetti E, Zhang L, Affolter A, Schaub MC, Gandhi M, Hersberger M, Warren BE, Lemieux H, Sobhi HF, Clanachan AS, Zaugg M (2014) The mechanism of intralipid®-mediated cardioprotection Complex IV inhibition by the active metabolite, palmitoylcarnitine, generates reactive oxygen species and activates reperfusion injury salvage kinases. PLoS One 9:e87205.LEAK
OXPHOS
N
NS
Permeabilized tissueRatHeart
Abdurrachim 2014 Biochim Biophys Acta2014Abdurrachim D, Ciapaite J, Wessels B, Nabben M, Luiken JJ, Nicolay K, Prompers JJ (2014) Cardiac diastolic dysfunction in high-fat diet fed mice is associated with lipotoxicity without impairment of cardiac energetics in vivo. Biochim Biophys Acta 1842:1525-37.LEAK
OXPHOS
ETS
F
N
Isolated mitochondriaMouseHeart
Cheng 2014 Science2014Cheng SC, Quintin J, Cramer RA, Shepardson KM, Saeed S, Kumar V, Giamarellos-Bourboulis EJ, Martens JH, Rao NA, Aghajanirefah A, Manjeri GR6, Li Y, Ifrim DC, Arts RJ, van der Meer BM, Deen PM, Logie C, O'Neill LA, Willems P, van de Veerdonk FL, van der Meer JW, Ng A, Joosten LA, Wijmenga C, Stunnenberg HG, Xavier RJ, Netea MG (2014) mTOR- and HIF-1 α –mediated aerobic glycolysis as metabolic basis for trained immunity. Science 345:1250684.LEAK
ROUTINE
ETS
HumanBlood cells
Other cell lines
Ferko 2014 Physiol Res2014Ferko M, Kancirová I, Jašová M, Čarnická S, Muráriková M, Waczulíková I, Sumbalová Z, Kucharská J, Uličná O, Ravingerová T, Ziegelhöffer A (2014) Remote ischemic preconditioning of the heart: protective responses in functional and biophysical properties of cardiac mitochondria. Physiol Res 63:469-78.LEAK
OXPHOS
F
N
Isolated mitochondriaRatHeart
Cavalcanti-de-Albuquerque 2014 J Appl Physiol2014Cavalcanti-de-Albuquerque JP, Salvador IC, Martins EL, Jardim-Messeder D, Werneck-de-Castro JP, Galina A, Carvalho DP (2014) Role of estrogen on skeletal muscle mitochondrial function in ovariectomized rats: a time course study in different fiber types. J Appl Physiol 116:779-89.LEAK
OXPHOS
F
N
Gp
NS
ROX
Permeabilized tissueRatSkeletal muscle
Scandroglio 2014 Free Radic Res2014Scandroglio F, Tortora V, Radi R, Castro L (2014) Metabolic control analysis of mitochondrial aconitase: influence over respiration and mitochondrial superoxide and hydrogen peroxide production. Free Radic Res 48:684-93.LEAK
OXPHOS
N
S
Isolated mitochondriaRatHeart
Nervous system
Liver
Kidney
Hasenour 2014 J Biol Chem2014Hasenour CM, Ridley DE, Hughey CC, James FD, Donahue EP, Shearer J, Viollet B, Foretz M, Wasserman DH (2014) 5-Aminoimidazole-4-carboxamide-1-β-D-ribofuranoside (AICAR) effect on glucose production, but not energy metabolism, is independent of hepatic AMPK in vivo. J Biol Chem 289:5950-9.LEAK
OXPHOS
ETS
N
ROX
Isolated mitochondriaMouseLiver
Davoudi 2014 PhD Thesis2014Davoudi M (2014) Effect of experimental complex III deficiency on respiratory chain assembly and function. PhD Thesis 1-65.LEAK
OXPHOS
ETS
N
S
Isolated mitochondriaMouseLiver
Ryu 2014 Cell Metab2014Ryu D, Jo YS, Lo Sasso G, Stein S, Zhang H, Perino A, Lee JU, Zeviani M, Romand R, Hottiger MO, Schoonjans K, Auwerx J (2014) A SIRT7-dependent acetylation switch of GABPβ1 controls mitochondrial function. Cell Metab 20:856-69.LEAK
OXPHOS
N
S
CIV
NS
Other combinations
ROX
HomogenateMouseHeart
Nervous system
Liver
Lung;gill
Littlejohns 2014 PLoS One2014Littlejohns B, Pasdois P, Duggan S, Bond AR, Heesom K, Jackson CL, Angelini GD, Halestrap AP, Suleiman MS (2014) Hearts from mice fed a non-obesogenic high-fat diet exhibit changes in their oxidative state, calcium and mitochondria in parallel with increased susceptibility to reperfusion injury. PLoS One 9:e100579.LEAK
OXPHOS
F
N
Isolated mitochondriaMouseHeart
Echevarría 2014 Biochem J2014Echevarría L, Clemente P, Hernández Sierra R, Gallardo ME, Fernández-Moreno MA, Garesse R (2014) Mammalian GatCAB is essential for mitochondrial translation 1 Glutamyl-tRNAGln amidotransferase is essential for mammalian mitochondrial translation in vivo. Biochem J 460:91-101.LEAK
ETS
NIntact cellsHuman
Mouse
Other cell lines
HEK
HeLa
Phielix 2014 Diabetologia2014Phielix E, Jelenik T, Nowotny P, Szendroedi J, Roden M (2014) Reduction of non-esterified fatty acids improves insulin sensitivity and lowers oxidative stress, but fails to restore oxidative capacity in type 2 diabetes: a randomised clinical trial. Diabetologia 57:572-81.LEAK
OXPHOS
ETS
N
NS
Permeabilized tissue
Isolated mitochondria
HumanSkeletal muscle
Meyer 2014 Biochimie2014Meyer A, Charles AL, Zoll J, Guillot M, Lejay A, Singh F, Schlagowski AI, Isner-Horobeti ME, Pistea C, Charloux A, Geny B (2014) Cryopreservation with dimethyl sulfoxide prevents accurate analysis of skinned skeletal muscle fibers mitochondrial respiration. Biochimie 100:227-33.LEAK
OXPHOS
N
S
CIV
Permeabilized tissueRatSkeletal muscle
Garratt 2014 Proc Natl Acad Sci U S A2014Garratt M, Pichaud N, Glaros EN, Kee AJ, Brooks RC (2014) Superoxide dismutase deficiency impairs olfactory sexual signaling and alters bioenergetic function in mice. Proc Natl Acad Sci U S A 111:8119-24.LEAK
OXPHOS
ETS
F
N
S
CIV
NS
ROX
Permeabilized tissueMouseLiver
Larsen 2014 Anal Biochem2014Larsen S, Kraunsøe R, Gram M, Gnaiger E, Helge JW, Dela F (2014) The best approach: homogenization or manual permeabilization of human skeletal muscle fibers for respirometry? Anal Biochem 446:64-8.LEAK
OXPHOS
ETS
N
NS
Permeabilized tissue
Homogenate
Human
Mouse
Skeletal muscle
Logan 2014 Nat Genet2014Logan CV, Szabadkai G, Sharpe JA, Parry DA, Torelli S, Childs AM, Kriek M, Phadke R, Johnson CA, Roberts NY, Bonthron DT, Pysden KA, Whyte T, Munteanu I, Foley AR, Wheway G, Szymanska K, Natarajan S, Abdelhamed ZA, Morgan JE, Roper H, Santen GW, Niks EH, van der Pol WL, Lindhout D, Raffaello A, De Stefani D, den Dunnen JT, Sun Y, Ginjaar I, Sewry CA, Hurles M, Rizzuto R. UK10K Consortium, Duchen MR, Muntoni F, Sheridan E (2014) Loss-of-function mutations in MICU1 cause a brain and muscle disorder linked to primary alterations in mitochondrial calcium signaling. Nat Genet 46:188-93.LEAK
ROUTINE
ETS
ROXIntact cellsHumanFibroblast
Kucera 2014 Oxid Med Cell Longev2014Kučera O, Endlicher R, Roušar T, Lotková H, Garnol T, Drahota Z, Cervinková Z (2014) The effect of tert-butyl hydroperoxide-induced oxidative stress on lean and steatotic rat hepatocytes in vitro. Oxid Med Cell Longev 2014:752506.LEAK
OXPHOS
N
S
Permeabilized cellsRatLiver
Other cell lines
Karabatsiakis 2014 Transl Psychiatry2014Karabatsiakis A, Böck C, Salinas-Manrique J, Kolassa S, Calzia E, Dietrich DE, Kolassa IT (2014) Mitochondrial respiration in peripheral blood mononuclear cells correlates with depressive subsymptoms and severity of major depression. Transl Psychiatry 4:e397.LEAK
ROUTINE
ETS
ROXIntact cellsHumanBlood cells
Lymphocyte
Tippets 2014 BMC Cardiovasc Disord2014Tippetts TS, Winden DR, Swensen AC, Nelson MB, Thatcher MO, Saito RR, Condie TB, Simmons KJ, Judd AM, Reynolds PR, Bikman BT (2014) Cigarette smoke increases cardiomyocyte ceramide accumulation and inhibits mitochondrial respiration. BMC Cardiovasc Disord 14:165.LEAK
OXPHOS
ETS
N
S
NS
ROX
Permeabilized cells
Permeabilized tissue
Isolated mitochondria
Mouse
Rat
Heart
Other cell lines
Ryan 2014 J Physiol2014Ryan TE, Brophy P, Lin CT, Hickner RC, Neufer PD (2014) Assessment of in vivo skeletal muscle mitochondrial respiratory capacity in humans by near-infrared spectroscopy: a comparison with in situ measurements. J Physiol 592:3231-41.LEAK
OXPHOS
F
N
S
NS
Permeabilized tissueHumanSkeletal muscle
Hecker 2014 JPEN2014Hecker M, Sommer N, Voigtmann H, Pak O, Mohr A, Wolf M, Vadász I, Herold S, Weissmann N, Morty R, Seeger W, Mayer K (2014) Impact of short- and medium-chain fatty acids on mitochondrial function in severe inflammation. J Parenter Enteral Nutr 38:587-94.LEAK
ROUTINE
ETS
Intact cellsHumanEndothelial;epithelial;mesothelial cell
Blood cells
HUVEC
Miquel 2014 Free Radic Biol Med2014Miquel E, Cassina A, Martínez-Palma L, Souza JM, Bolatto C, Rodríguez-Bottero S, Logan A, Smith RA, Murphy MP, Barbeito L, Radi R, Cassina P (2014) Neuroprotective effects of the mitochondria-targeted antioxidant MitoQ in a model of inherited amyotrophic lateral sclerosis. Free Radic Biol Med 70:204-13.LEAK
OXPHOS
ETS
NS
ROX
Permeabilized tissueMouseSkeletal muscle
Nervous system
Lou 2014b PLoS One2014Lou PH, Lucchinetti E, Zhang L, Affolter A, Gandhi M, Hersberger M, Warren BE, Lemieux H, Sobhi HF, Clanachan AS, Zaugg M (2014) Loss of Intralipid®- but not sevoflurane-mediated cardioprotection in early type-2 diabetic hearts of fructose-fed rats: importance of ROS signaling. PLoS One 9:e104971.LEAKF
N
S
CIV
Permeabilized tissueRatHeart
Ost 2014 PLoS One2014Ost M, Werner F, Dokas J, Klaus S, Voigt A (2014) Activation of AMPKa2 is not crucial for mitochondrial uncoupling-induced metabolic effects but required to maintain skeletal muscle integrity. PLoS One 14:e94689.LEAK
OXPHOS
ETS
F
N
NS
Permeabilized tissueMouseSkeletal muscle
Gram 2014 Exp Gerontol2014Gram M, Vigelsoe A, Yokota T, Hansen CN, Helge JW, Hey-Mogensen M, Dela F (2014) Two weeks of one-leg immobilization decreases skeletal muscle 2 respiratory capacity equally in young and elderly men. Exp Gerontol 58C:269-78.LEAK
OXPHOS
N
NS
ROX
Permeabilized tissueHumanSkeletal muscle
Widmann 2014 Thesis2014Widmann M (2014) Effekte von Noradrenalin und LPS auf die mitochondriale Atmung von Alveolarmakrophagen. Thesis Universität Ulm, Medizinische Fakultät. 63 pp.LEAK
ROUTINE
ETS
ROXIntact cellsMouseLung;gill
Other cell lines
Chakraborty 2014 J Cardiovasc Dis2014Chakraborty M, Phillips ARJ, Macdonald J, Windsor JA, Hickey AJR (2014) Mitochondrial respiration in mononuclear cells and heart fibers in spontaneously hypertensive rats. J Cardiovasc Dis ISSN:2330-459.LEAK
ROUTINE
OXPHOS
ETS
N
S
Gp
CIV
NS
ROX
Permeabilized cells
Permeabilized tissue
RatHeart
Blood cells
Pecina 2014 Biochim Biophys Acta Clinical2014Pecina P, Houstkova H, Mracek T, Pecinova A, Nuskova H.Tesarova M, Hansikova H, Janota J, Zemanc J, Houstek J (2014) Noninvasive diagnostics of mitochondrial disorders in isolated lymphocytes with high resolution respirometry. Biochim Biophys Acta Clinical 2:62–71.LEAK
OXPHOS
N
Gp
CIV
Other combinations
ROX
Permeabilized cellsHumanBlood cells
Lymphocyte
Divakaruni 2014 Curr Protoc Toxicol2014Divakaruni AS, Rogers GW, Murphy AN (2014) Measuring mitochondrial function in permeabilized cells using the Seahorse XF Analyzer or a clark-type oxygen electrode. Curr Protoc Toxicol 60:25.2.1-25.2.16.LEAK
OXPHOS
ETS
F
N
S
Gp
CIV
ROX
Permeabilized cellsMouseSkeletal muscle
Other cell lines
Larsen 2014 Am J Clin Nutr2014Larsen FJ, Schiffer TA, Ekblom B, Mattsson MP, Checa A, Wheelock CE, Nyström T, Lundberg JO, Weitzberg E (2014) Dietary nitrate reduces resting metabolic rate: a randomized, crossover study in humans. Am J Clin Nutr 99:843-50.LEAK
ROUTINE
OXPHOS
Intact cells
Permeabilized cells
HumanSkeletal muscle
Stem cells
LEAK respiration2014Gnaiger E (2014) LEAK respiration: concept-linked terminology of respiratory states. Mitochondr Physiol Network 2014-07-04.LEAK
ETS
Anmann 2014 Biochim Biophys Acta2014Anmann T, Varikmaa M, Timohhina N, Tepp K, Shevchuk I, Chekulayev V, Saks V, Kaambre T (2014) Formation of highly organized intracellular structure and energy metabolism in cardiac muscle cells during postnatal development of rat heart. Biochim Biophys Acta 1837:1350-61.LEAK
OXPHOS
N
S
Permeabilized tissueRatHeart
Morand 2014 Eur J Nutr2014Morand R, Bouitbir J, Felser A, Hench J, Handschin C, Frank S, Krähenbühl S (2014) Effect of carnitine, acetyl-, and propionylcarnitine supplementation on the body carnitine pool, skeletal muscle composition, and physical performance in mice. Eur J Nutr 53:1313-25.LEAK
OXPHOS
N
S
CIV
Permeabilized tissueMouseSkeletal muscle
Brandt 2014 Chem Biol Interact2014Brandt AP, do Rocio Andrade Pires A, Rocha ME, Noleto GR, Acco A, de Souza CE, Echevarria A, Dos Santos Canuto AV, Cadena SM (2014) Sydnone SYD-1 affects the metabolic functions of isolated rat hepatocytes. Chem Biol Interact 218C:107-14.LEAK
ROUTINE
ETS
ROXIntact cellsRatLiver
Varikmaa 2014 Biochim Biophys Acta2014Varikmaa M, Bagur R, Kaambre T, Grichine A, Timohhina N, Tepp K, Shevchuk I, Chekulayev V, Metsis M, Boucher F, Saks V, Kuznetsov AV, Guzun R (2014) Role of mitochondria-cytoskeleton interactions in respiration regulation and mitochondrial organization in striated muscles. Biochim Biophys Acta 1837:232-45.LEAK
OXPHOS
N
CIV
Permeabilized cells
Isolated mitochondria
RatHeart
Skeletal muscle
Serteyn 2014 Bioenergetics2014Serteyn D, de la Rebière de Pouyade G, Sandersen C, Salciccia A, Grulke S, Mouithys-Mickalad A, Franck T, Lejeune JP, Ceusters Justine D (2014) Muscle mitochondrial dysfunction in horses affected by acute laminitis. Bioenergetics 3:1-7.LEAK
OXPHOS
ETS
N
S
NS
ROX
Permeabilized tissueHorseSkeletal muscle
Rossato 2014 PLoS One2014Rossato FA, Zecchin KG, La Guardia PG, Ortega RM, Alberici LC, Costa RA, Catharino RR, Graner E, Castilho RF, Vercesi AE (2014) Fatty acid synthase inhibitors induce apoptosis in non-tumorigenic Melan-A cells associated with inhibition of mitochondrial respiration. PLoS One 9:e101060.LEAK
OXPHOS
ETS
N
S
CIV
NS
Intact cells
Permeabilized cells
MouseEndothelial;epithelial;mesothelial cell
Other cell lines
Carriere 2014 Diabetes2014Carrière A, Jeanson Y, Berger-Müller S, André M, Chenouard V, Arnaud E, Barreau C, Walther R, Galinier A, Wdziekonski B, Villageois P, Louche K, Collas P, Moro C, Dani C, Villarroya F, Casteilla L (2014) Browning of white adipose cells by intermediate metabolites: an adaptive mechanism to alleviate redox pressure. Diabetes 63:3253-65.LEAK
ROUTINE
ETS
Intact cellsMouseFat
Cotoia 2014 PLoS One2014Cotoia A, Scrima R, Gefter JV, Piccoli C, Cinnella G, Dambrosio M, Fink MP, Capitanio N (2014) p-Hydroxyphenylpyruvate, an intermediate of the Phe/ Tyr catabolism, improves mitochondrial oxidative metabolism under stressing conditions and prolongs survival in rats subjected to profound hemorrhagic shock. PLoS One 9:e90917.LEAK
ROUTINE
ETS
Intact cellsRat
Koenemann 2014 Dissertation2014Koenemann B (2014) Einfluss der Hyperglykämie auf die mitochondriale Atmung von Leberzellen septischer Mäuse mit und ohne Imeglimin. PhD Thesis 1-61.LEAK
OXPHOS
ETS
F
N
S
NS
Other combinations
ROX
HomogenateMouseLiver
Beiral 2014 Cell Transplant2014Beiral HJ, Rodrigues-Ferreira C, Fernandes AM, Gonsalez SR, Mortari NC, Takiya CM, Sorenson MM, Figueiredo-Freitas C, Galina A, Vieyra A (2014) The impact of stem cells on electron fluxes, proton translocation and ATP synthesis in kidney mitochondria after ischemia/reperfusion. Cell Transplant 23:207-20.LEAK
OXPHOS
ETS
SIsolated mitochondriaRatKidney
Stem cells
Piel 2014 Acta Physiol (Oxf)2014Piel S, Ehinger JK, Elmér E, Hansson Magnus J (2014) Metformin induces lactate production in peripheral blood mononuclear cells and platelets through specific mitochondrial complex I inhibition. Acta Physiol (Oxf) 213:171-80.LEAK
ROUTINE
OXPHOS
ETS
N
S
CIV
NS
ROX
Intact cells
Permeabilized cells
HumanBlood cells
Other cell lines
Platelet
Jiroutkova 2014 Intensive Care Medicine Experimental2014Jiroutkova K, Ziak J, Krajcova A, Fric M, Dzupa V, Duska F (2014) The role of mitochondrial dysfunction in the pathophysiology of icu-acquired weakness. Intensive Care Med 2:29.LEAK
OXPHOS
ETS
N
S
HumanSkeletal muscle
Suchadolskiene 2014 BMC Neurosci2014Suchadolskiene O, Pranskunas A, Baliutyte G, Veikutis V, Dambrauskas Z, Vaitkaitis D, Borutaite V (2014) Microcirculatory, mitochondrial, and histological changes following cerebral ischemia in swine. BMC Neurosci 15:2.LEAK
OXPHOS
N
S
Isolated mitochondriaPigNervous system
Wessels 2014 PLoS One2014Wessels B, Ciapaite J, van den Broek NMA, Nicolay K, Prompers JJ (2014) Metformin Impairs Mitochondrial Function in Skeletal Muscle of Both Lean and Diabetic Rats in a Dose-Dependent Manner. PLoS One 9:e100525.LEAK
OXPHOS
ETS
N
S
Isolated mitochondriaRatSkeletal muscle
Baggio 2014 Nucleic Acids Res2014Baggio F, Bratic A, Mourier A, Kauppila TE, Tain LS, Kukat C, Habermann B, Partridge L, Larsson NG5 (2014) Drosophila melanogaster LRPPRC2 is involved in coordination of mitochondrial translation. Nucleic Acids Res 42:13920-38.LEAK
OXPHOS
ETS
N
S
Gp
CIV
Other combinations
Permeabilized tissueDrosophila
Hexapods
Brown 2014 J Cardiovasc Pharmacol Ther2014Brown DA, Hale SL, Baines CP, del Rio CL, Hamlin RL, Yueyama Y, Kijtawornrat A, Yeh ST, Frasier CR, Stewart LM, Moukdar F, Shaikh SR, Fisher-Wellman KH, Neufer PD, Kloner RA (2014) Reduction of early reperfusion injury with the mitochondria-targeting peptide bendavia. J Cardiovasc Pharmacol Ther 19:121-32.LEAK
OXPHOS
SIntact organ
Isolated mitochondria
RatHeart
Furlanetto 2014 Thesis University of Parana2014Furlanetto ALD de Matos (2014) Estresse oxidativo e transição de permeabilidade mitocondrial em células embriogênicas somáticas de Auraucária angustifolia estressadas pelo frio. Thesis University of Parana 53pp.LEAK
OXPHOS
NIsolated mitochondriaPlants
Hereng 2014 Human Reprod2014Hereng TH, Elgstoen KBP, Eide L, Rosendal KR, Skalhegg BS (2014) Serum albumin and HCO3 2 regulate separate pools of ATP in human spermatozoa. Human Reprod 29:918-30.ETS
LEAK
ROUTINE
Intact cellsHumanGenital
Slinde 2014 freepatentsonline.com2014Slinde E, Egelandsdal B (2014) Meat treatment and preservation method. Freepatentsonline.com 14/128207.LEAK
OXPHOS
ETS
F
N
NS
ROX
Permeabilized tissueBovinesSkeletal muscle
Hoevenaars 2014 Mol Nutr Food Res2014Hoevenaars FP, Bekkenkamp-Grovenstein M, Janssen RJ, Heil SG, Bunschoten A, Hoek-van den Hil EF, Snaas-Alders S, Teerds K, van Schothorst EM, Keijer J (2014) Thermoneutrality results in prominent diet-induced body weight differences in C57BL/6J mice, not paralleled by diet-induced metabolic differences. Mol Nutr Food Res 58:799-807.LEAK
OXPHOS
ETS
N
NS
Isolated mitochondriaMouseSkeletal muscle
Chinopoulos 2014 Methods Enzymol2014Chinopoulos C, Kiss G, Kawamata H, Starkov AA (2014) Measurement of ADP-ATP exchange in relation to mitochondrial transmembrane potential and oxygen consumption. Methods Enzymol 542:333-48.LEAK
OXPHOS
Permeabilized cellsHumanHEK
Stenberg 2014 PLoS One2014Stenberg TA, Kildal AB, Sanden E, How OJ, Hagve M, Ytrehus K, Larsen TS, Myrmel T (2014) The acute phase of experimental cardiogenic shock is counteracted by microcirculatory and mitochondrial adaptations. PLoS One 9:e105213.LEAK
OXPHOS
N
S
Isolated mitochondriaPigHeart
Liver
Kidney
Bayot 2014 Biochimie2014Bayot A, Gareil M, Chavatte L, Hamon MP, L'hermitte-Stead C, Beaumatin F, Priault M, Rustin P, Lombès A, Friguet B, Bulteau AL (2014) Effect of Lon protease knockdown on mitochondrial function in HeLa cells. Biochimie 100:38-47.LEAK
ROUTINE
ETS
HumanEndothelial;epithelial;mesothelial cell
HeLa
Cour 2014 J Cardiovasc Pharmacol Ther2014Cour M, Jahandiez V, Loufouat J, Ovize M, Argaud L (2014) Minor changes in core temperature prior to cardiac arrest influence outcomes: an experimental study. J Cardiovasc Pharmacol Ther pii:1074248414562911. 20:407-13.LEAK
OXPHOS
NIsolated mitochondriaRabbitHeart
Nervous system
Chu 2014 Liver Transpl2014Chu MJ, Hickey AJ, Jiang Y, Petzer A, Bartlett AS, Phillips AR (2014) Mitochondrial dysfunction in rat steatotic liver is due to a defect in Complex-I making them more susceptible to prolonged cold ischemia. Liver Transpl 21:396-407.LEAK
OXPHOS
ETS
N
S
ROX
HomogenateRatLiver
Shama 2014 Funct Ecol2014Shama LNS, Strobel A, Mark FC, Wegner KM (2014) Transgenerational plasticity in marine sticklebacks: maternal effects mediate impacts of a warming ocean. Funct Ecol 28:1482–93.LEAK
OXPHOS
ETS
N
ROX
Permeabilized tissueFishesHeart
Schiffer 2014 FASEB J2014Schiffer TA, Ekblom B, Lundberg JO, Weitzberg E, Larsen FJ (2014) Dynamic regulation of metabolic efficiency explains tolerance to acute hypoxia in humans. FASEB J 28:4303-11.LEAK
OXPHOS
ETS
N
S
Isolated mitochondriaHumanSkeletal muscle
Patil 2014 Am J Physiol Renal Physiol2014Patil NK, Parajuli N, Macmillan-Crow LA, Mayeux PR (2014) Inactivation of renal mitochondrial respiratory complexes and manganese superoxide dismutase during sepsis: mitochondria targeted antioxidant mitigates injury. Am J Physiol Renal Physiol 306:F734-43.LEAK
OXPHOS
N
S
CIV
Permeabilized tissueMouseKidney
Takahashi 2014 Exp Gerontol2014Takahashi K, Noda Y, Ohsawa I, Shirasawa T, Takahashi M (2014) Extended lifespan, reduced body size and leg skeletal muscle mass, and decreased mitochondrial function in clk-1 transgenic mice. Exp Gerontol 58:146-53.LEAK
OXPHOS
N
NS
Isolated mitochondriaMouseSkeletal muscle
Liver
Uncoupler2014Gnaiger E (2014) Is respiration uncoupled - noncoupled - dyscoupled? Mitochondr Physiol Network 2014-04-18.LEAK
ETS
Van Bergen 2014 Mitochondrion2014Van Bergen NJ, Blake RE, Crowston JG, Trounce IA (2014) Oxidative phosphorylation measurement in cell lines and tissues. Mitochondrion 15:24-33.LEAK
ROUTINE
OXPHOS
ETS
N
S
NS
Intact cells
Permeabilized cells
Isolated mitochondria
Human
Mouse
Nervous system
Blood cells
Lymphocyte
Klepinin 2014 J Bioenerg Biomembr2014Klepinin A, Chekulayev V, Timohhina N, Shevchuk I, Tepp K, Kaldma A, Koit A, Saks V, Kaambre T (2014) Comparative analysis of some aspects of mitochondrial metabolism in differentiated and undifferentiated neuroblastoma cells. J Bioenerg Biomembr 46:17-31.LEAK
OXPHOS
N
S
CIV
NS
Permeabilized cellsMouseHeart
Other cell lines
... further results


Publications in the MiPMap

Abstracts: LEAK

Sort in ascending/descending order by a click on one of the small symbols in squares below.
 YearReferenceCouplingPathwayPreparationOrganismTissue;cell
Volani 2016 Abstract Mito Xmas Meeting Innsbruck2016Effects of systemic iron perturbations on mitochondrial activity and on cellular metabolism in vivo.LEAK
ROUTINE
OXPHOS
ETS
N
S
HomogenateMouseLiver
Sparagna 2016 Abstract IOC1092016Sparagna GC (2016) Measuring cardiac mitochondrial function in pediatric patients before and after implantation of a left ventricular assist device. Mitochondr Physiol Network 21.01.LEAK
OXPHOS
N
S
NS
HumanHeart
Cecatto 2016 Abstract IOC1162016Cecatto C, Silva JC, Wajner A, Godoy KS, Ribeiro, RT, Amaral AU, Wajner M (2016) cis-4-Decenoic and decanoic acids impair mitochondrial energy, redox and Ca2+ homeostasis and induce mitochondrial permeability transition pore opening in rat brain and liver. Mitochondr Physiol Network 21.11LEAK
OXPHOS
ETS
F
N
CIV
Other combinations
Permeabilized tissue
Isolated mitochondria
RatNervous system
Liver
Krumschnabel 2016a Abstract MitoFit Science Camp 20162016O2k-Protocols: Mitochondrial preparations for HRR.LEAK
OXPHOS
ETS
N
S
NS
ROX
Permeabilized tissue
Homogenate
Isolated mitochondria
MouseHeart
Calzia 2016 Abstract MitoFit Science Camp 20162016Mitochondrial respiration shows tissue- and strain-specific aging in short- and long-lived N. furzeri strains.LEAK
OXPHOS
ETS
NSFishesHeart
Skeletal muscle
Nervous system
Liver
Davies 2016 Abstract Proceedings of The Physiological Society2016Development of mitochondrial function in the cortex and cerebellum of the ovine fetus.LEAK
OXPHOS
N
S
NS
HomogenateBovinesNervous system
Gnaiger 2016 Abstract UMDF20162016Schöpf B, Schäfer G, Weber A, Talasz H, Eder IE, Klocker H, Gnaiger E (2016) Oxidative phosphorylation and mitochondrial function differ between human prostate tissue and cultured cells.LEAK
OXPHOS
ETS
F
N
NS
Permeabilized cells
Permeabilized tissue
HumanEndothelial;epithelial;mesothelial cell
Genital
Other cell lines
Fibroblast
Sumbalova 2016 Abstract Mito Xmas Meeting Innsbruck2016Methods for evaluation of mitochondrial membrane potential with multi-sensor high-resolution respirometry: potentiometry vs fluorometry.LEAK
OXPHOS
ETS
F
N
S
NS
ROX
MouseNervous system
Doerrier 2016 Abstract MitoFit Science Camp 20162016Development of a SUIT reference protocol for OXPHOS analysis by high-resolution respirometry.LEAK
ROUTINE
OXPHOS
ETS
F
N
S
Gp
CIV
NS
ROX
Permeabilized cells
Permeabilized tissue
Homogenate
Isolated mitochondria
Human
Mouse
Heart
Blood cells
HEK
Platelet
Volani 2016 Abstract MitoFit Science Camp 20162016Effects of iron imbalances on mitochondrial activity in mouse liver homogenate and permabilized rat PBMCs.LEAK
OXPHOS
ETS
N
S
HomogenateMouse
Rat
Liver
Blood cells
Lymphocyte
Chicco 2016b Abstract MitoFit Science Camp 20162016OXPHOS coupling efficiency of permeabilized muscle fibers predicts metabolic efficiency of subjects exercising at 5260 m.LEAK
OXPHOS
ETS
F
N
Permeabilized tissueHumanSkeletal muscle
Laner 2016 Abstract Mito Xmas Meeting Innsbruck2016OXPHOS and ETS capacity in permeabilized fibres of canine superathletes.LEAK
OXPHOS
ETS
F
N
S
NS
ROX
Permeabilized tissueDogSkeletal muscle
Laner 2016 Abstract MitoFit Science Camp 20162016OXPHOS and ETS capacity in permeabilized fibres of canine superathletes. Analysis of HRR data presenting unexpected challenges.LEAK
OXPHOS
ETS
F
N
S
NS
ROX
Permeabilized tissueDogSkeletal muscle
Krumschnabel 2016b Abstract MitoFit Science Camp 20162016O2k-MultiSensor: Mitochondrial respiration media for HRR and simultaneous O2k-Fluorometry.LEAK
OXPHOS
ETS
N
S
NS
ROX
HumanKidney
HEK
Herminghaus 2016 Abstract MitoFit Science Camp 20162016Sterile laparotomy time-dependently modulates hepatic but not colonic mitochondrial function similar to moderate abdominal sepsis.LEAK
OXPHOS
N
NS
RatLiver
Endothelial;epithelial;mesothelial cell
Doerrier 2016b Abstract Mito Xmas Meeting Innsbruck2016Searching for specific targets of ischemic damage of cardiac mitochondria using O2k-Fluorometry.LEAK
OXPHOS
ETS
F
N
S
Gp
CIV
ROX
Isolated mitochondriaMouseHeart
Sumbalova 2016b Abstract MitoFit Science Camp 20162016Human blood cells: isolation and HRR.LEAK
ROUTINE
OXPHOS
ETS
F
N
S
Gp
CIV
NS
Other combinations
ROX
Intact cells
Permeabilized cells
HumanBlood cells
Lymphocyte
Platelet
Bezuidenhout 2016b Abstract MitoFit Science Camp 20162016Analysis and comparison of mitochondrial function using cooling plate or ice during mechanical separation of mouse skeletal muscle fibers.LEAK
OXPHOS
ETS
N
S
ROX
Permeabilized tissueMouseSkeletal muscle
Madlala 2016 Abstract MitoFit Science Camp 20162016Fructose-induced defects in selected mitochondrial enzymes is detected by respirometry using glutamate&malate but not pyruvate&malate substrates.LEAK
OXPHOS
ETS
NPermeabilized cellsHumanLiver
Schoepf 2016 Abstract Mito Xmas Meeting Innsbruck2016Mitochondrial function in primary prostate cancer.ETS
LEAK
OXPHOS
N
Other combinations
S
Permeabilized tissueHuman
Sobotka 2016 Abstract IOC1162016Sobotka O, Kucera O, Stankova P, Endlicher R, Nozickova K, Banni A, Cervinkova Z (2016) Mitochondrial respiration in fatty liver. Mitochondr Physiol Network 21.11ETS
LEAK
OXPHOS
CIV
F
Gp
N
NS
Other combinations
ROX
S
Isolated mitochondriaRatLiver
Lamberti 2016 Abstract MitoFit Science Camp 20162016Development of a reference sample for HRR.LEAK
ROUTINE
OXPHOS
ETS
F
N
S
Gp
CIV
NS
Other combinations
ROX
HumanKidney
HEK
Krajcova 2016 Abstract MitoFit Science Camp 20162016Mitochondrial pathogenesis of propofol infusion syndrome in an in vitro model of human skeletal muscle.LEAK
ETS
FHomogenateHumanSkeletal muscle
Calzia 2015 Abstract MiP20152015Mitochondrial respiration in homogenized small tissue biopsies from the M. Vastus lateralis of patients with Huntington's Disease before and after cycling exercise.LEAK
OXPHOS
ETS
N
S
ROX
HumanSkeletal muscle
Sheldon 2015 Abstract MiPschool Greenville 20152015eNOS is required to preserve hepatic mitochondrial function in western diet-induced nonalcoholic fatty liver disease.LEAK
OXPHOS
ETS
N
NS
MouseLiver
Salin 2015 Abstract MiP20152015Individual variation in whole-organism performance is related to mitochondrial properties at high temperatures.LEAKFishesSkeletal muscle
Liver
Gnaiger 2015 Abstract MiPschool Cape Town 2015 II2015On coupling control of mitochondrial respiration. What is wrong with the RCR?LEAK
ROUTINE
OXPHOS
ETS
N
S
ROX
Devaux 2015 Abstract MiP20152015Mitochondrial complexes I and II behave differently in two anoxia-tolerant species: adaptive mitochondrial plasticity may be related to the ability to undergo metabolic depression.ETS
LEAK
OXPHOS
N
S
HomogenateFishesNervous system
Gnaiger 2015 Abstract MiP20152015Mitochondrial function of cyropreserved HEK 293T cells: development of a reference sample for high-resolution respirometry.LEAK
ROUTINE
OXPHOS
ETS
N
S
NS
Intact cells
Permeabilized cells
HumanHEK
Van Dyk 2015 Abstract MiPschool Cape Town 20152015Optimization of selected cell lines for use on the Seahorse extracellular flux analyzer.LEAK
ROUTINE
ETS
N
ROX
Isolated mitochondriaHumanOther cell lines
Fibroblast
Doerrier 2015 Abstract MiPschool Greenville 20152015"Succinate paradox" study by high resolution respirometry combined with fluorometry and spectrofluorometry: NextGen-O2k.LEAK
OXPHOS
SIsolated mitochondriaMouseHeart
Galina 2015 Abstract MiP20152015High intensity interval training (HIIT) induces specific changes in respiration and electron leakage in the mitochondria of different rat skeletal muscles.LEAKN
S
ROX
Permeabilized tissueRatSkeletal muscle
Maarman 2015 Abstract MiPschool Cape Town 20152015Characterisation of mitochondrial function in a model of pulmonary hypertension-induced right ventricular failure.LEAK
OXPHOS
N
S
NS
Isolated mitochondriaRatHeart
Doerrier 2015 Abstract MiP20152015Simultaneous measurement of mitochondrial respiration, hydrogen peroxide production, and NADH autofluorescence to assess mitochondrial function.LEAK
OXPHOS
SIsolated mitochondriaMouseHeart
Karabatsiakis 2015 Abstract MiP20152015Mitochondrial respiration of peripheral blood mononuclear cells in patients with borderline personality disorder.LEAK
ROUTINE
OXPHOS
ETS
ROXHumanBlood cells
Smenes 2015 Abstract IOC1002015Smenes BT, Baekkerud FH, Hassel E, Wohlwend M, Slagsvold KH, Rognmo O, Wahba A (2015) Mitochondrial function in patients exercising prior to coronary surgery – A single blinded randomized controlled trial. Mitochondr Physiol Network 20.01.LEAK
ROUTINE
ETS
N
S
HumanSkeletal muscle
Funk 2015 Abstract MiPschool Greenville 20152015Isolated mitochondria from liver and brain of long-lived growth hormone receptor gene disrupted mice demonstrate reduced respiration rates.LEAK
OXPHOS
Isolated mitochondriaMouseNervous system
Liver
Cannon 2015 Fatty Acid Oxidation O2k-Network Discussion Forum2015Cannon 2015 Fatty Acid Oxidation O2k-Network Discussion ForumLEAK
OXPHOS
ETS
F
N
S
NS
ROX
Permeabilized tissueHuman
Mouse
Skeletal muscle
Ojuka 2015 Abstract MiPschool Cape Town 20152015Use of malate or carnitine as co-substrates for assessment of fatty acid oxidation.LEAK
OXPHOS
ETS
Permeabilized cells
Permeabilized tissue
Isolated mitochondria
Renshaw 2015 Abstract MiP20152015Mitochondrial responses to thermal stress: is the ability to withstand anoxia-induced stress associated with cross-tolerance to thermal stress?LEAK
OXPHOS
ETS
N
S
HomogenateFishesNervous system
Ali 2015 Abstract MiP20152015Mitochondrial function and ROS homeostasis in young mouse heart and brain: the sex factor!LEAK
OXPHOS
ETS
HomogenateMouseHeart
Nervous system
Gnaiger 2015 Abstract MiPschool Cape Town 20152015The functional design of the electron transfer system: substrate control of mitochondrial respiration.LEAK
ROUTINE
OXPHOS
ETS
N
S
NS
Permeabilized cells
Permeabilized tissue
Homogenate
Isolated mitochondria
Rutkai 2015 Abstract MiPschool Greenville 20152015Sex-differences in mitochondrial respiration is mediated by nitric oxide in rat cerebral arteries.LEAK
ROUTINE
ETS
RatEndothelial;epithelial;mesothelial cell
Chavanelle 2015 Fatty Acid Oxidation O2k-Network Discussion Forum2015Chavanelle 2015 Fatty Acid Oxidation O2k-Network Discussion ForumLEAK
OXPHOS
F
N
Permeabilized tissueMouseSkeletal muscle
Ali 2015 Abstract MiPschool Cape Town 20152015Early gender-related dimorphism in heart and brain mitochondria function and ROS dynamics.LEAK
OXPHOS
ETS
MouseHeart
Nervous system
Sumbalova 2015 Abstract MiP20152015High-resolution measurement of mitochondrial membrane potential and respiration – comparison of potentiometric and fluorometric methods.LEAK
OXPHOS
ETS
N
S
NS
Isolated mitochondriaMouseNervous system
Laner 2015 Abstract MiPschool Cape Town 20152015The OROBOROS Oxygraph-2k for high-resolution respirometry and O2k-Fluorometry: a new quality in OXPHOS analysis.LEAK
ROUTINE
OXPHOS
ETS
N
S
NS
Intact cells
Isolated mitochondria
Mouse
Saccharomyces cerevisiae
Heart
Sleiman 2015 Abstract MiP20152015Mitochondrial respiration in sequential biospies from skeletal muscles during hemorrhagic shock and over the course of 48h of reperfusion in pigs.LEAK
OXPHOS
ETS
N
S
HomogenatePigSkeletal muscle
Blecha 2015 Abstract MiP20152015Modulation of mitochondrial electron transport chain activity differentially regulates cell death in proliferating and quiescent cells.LEAK
ETS
ROX
Ciapaite 2015 Fatty Acid Oxidation O2k-Network Discussion Forum2015Ciapaite 2015 Fatty Acid Oxidation O2k-Network Discussion ForumLEAK
OXPHOS
ETS
FPermeabilized tissueHuman
Rat
Skeletal muscle
Dyrstad 2015 Abstract MiPschool London 20152015Activation of epithelial to mesenchymal transition (EMT) regulates stemness and metabolic reprogramming in mammary epithelial cells.LEAK
ROUTINE
ETS
N
ROX
HumanEndothelial;epithelial;mesothelial cell
Other cell lines
Laner 2015 Abstract MiP20152015Comparative mitochondrial physiology: OXPHOS and ETS capacity in permeabilized fibres of canine superathletes.LEAK
OXPHOS
ETS
F
N
S
NS
ROX
Permeabilized tissueDogSkeletal muscle
Ost 2015 Abstract IOC1002015Ost M (2015) “Mitokines” and the organismal role of mitochondrial function in energy homeostasis & metabolism. Mitochondr Physiol Network 20.01.LEAK
OXPHOS
Permeabilized tissueMouseSkeletal muscle
Fibroblast
Weidgang 2015 Abstract MiP20152015Mitochondrial respiration in homogenized biopsies from kidney, liver, heart and diaphragm from mice after blunt thoracic trauma and hemorrhagic shock. Effects of a novel hydrogen sulfide donor AP39.LEAK
OXPHOS
ETS
N
S
HomogenateMouseHeart
Skeletal muscle
Liver
Kidney
Mendonca 2014 Abstract IOC 2014-04 Schroecken2014Mendonca AP, Rodrigues MF, Amoedo ND, Oliveira MF (2014) Effects of iron on mitochondrial physiology of central nervous system cell lines. Mitochondr Physiol Network 19.02.LEAK
OXPHOS
ETS
Nervous system
Other cell lines
Neuroblastoma
Lai 2014 Abstract1 MiP20142014Improved isolation of high quality subsarcolemmal and interfibrillar mitochondria from skeletal muscle.LEAK
OXPHOS
NIsolated mitochondriaRat
Dog
Heart
Skeletal muscle
Fibroblast
Doerrier 2014 Abstract SECF2014Evaluation of melatonin treatment in mitochondria of permeabilized myocardial fibers from septic mice.LEAK
OXPHOS
ETS
N
S
NS
ROX
Permeabilized tissue
Isolated mitochondria
MouseHeart
Volodina 2014 Abstract MiP20142014Multipotent stromal cells injection improves rat liver regeneration through activation of mitochondrial functions after subtotal hepatectomy.LEAK
OXPHOS
ETS
N
NS
Isolated mitochondriaRatLiver
Alberici 2014 Abstract MiP20142014Effects of long-chain acyl-CoA synthetase 6 knockdown in primary skeletal muscle cells metabolism.LEAK
ROUTINE
ETS
Intact cellsRatSkeletal muscle
El-Bacha 2014 Abstract MiP20142014Cytotoxicity of grape pomace extract (Vitis vinifera L.) from Brazilian wine industry in human hepatocarcinoma HepG2 cells.LEAK
ROUTINE
ETS
Intact cellsHumanLiver
Zorzano 2014 Abstract MiP20142014Metabolic implications of mitofusin 2 dysfunction.LEAK
OXPHOS
MouseSkeletal muscle
Bristot 2014 Abstract MiP20142014High-resolution respirometry and bioenergetics evaluation in fibroblasts derived from patients with TP53 germline mutations.LEAK
OXPHOS
Intact cellsHumanFibroblast
Herminghaus 2014 Abstract MiP20142014Severity of polymicrobial sepsis modulates mitochondrial function in rat liver.LEAK
OXPHOS
N
S
Isolated mitochondriaRatLiver
Porter 2014 Abstract IOC952014Porter C (2014) The impact of resistance exercise training on skeletal muscle mitochondrial respiration in healthy young adults. Mitochondr Physiol Network 19.10LEAK
OXPHOS
ETS
Permeabilized tissueHumanSkeletal muscle
Power 2014 Abstract MiP20142014The hot heart: cardiac mitochondrial energetics during hyperthermia.LEAK
OXPHOS
Isolated mitochondriaRatHeart
Jezek 2014 Abstract MiP20142014Mitochondrial cristae morphology changes: from Hackenbrock to hypoxia.LEAK
OXPHOS
Isolated mitochondriaOther cell lines
Laner 2014 Abstract MiP20142014Cytochrome c flux control factor as a quality criterion in respiratory OXPHOS analysis in canine permeabilized fibres.LEAK
ROUTINE
OXPHOS
ETS
N
NS
Permeabilized tissueDogSkeletal muscle
Schoepf 2014 Abstract MiP20142014OXPHOS analysis in small prostate biopsies.LEAK
OXPHOS
ETS
N
S
CIV
NS
Permeabilized tissueHumanGenital
Paes 2014 Abstract IOC 2014-04 Schroecken2014Paes MC, Saraiva FMS, Nogueira NP, Laranja GAT, Coelho MGP, Oliveira MF (2014) Heme increases mitochondrial membrane potential and ROS production in Trypanosoma cruzi epimastigotes. Mitochondr Physiol Network 19.02.LEAK
OXPHOS
ETS
S
Other combinations
Permeabilized cells
Oxidase;biochemical oxidation
Protists
Krumschnabel 2014 Abstract MiP20142014Simultaneous high-resolution measurement of mitochondrial respiration and hydrogen peroxide production.LEAK
OXPHOS
ETS
N
S
NS
Homogenate
Isolated mitochondria
MouseNervous system
Karabatsiakis 2014 Abstract IOC962014Karabatsiakis A (2014) Consequences of depression on respiratory activity in peripheral blood mononuclear cells. Mitochondr Physiol Network 19.11.LEAK
ROUTINE
ETS
Intact cellsHumanBlood cells
Lymphocyte
Sparks 2014 Abstract MiP20142014NAMPT remodels substrate metabolism in skeletal muscle.LEAK
OXPHOS
N
S
Permeabilized tissueMouseSkeletal muscle
Calzia 2013 Abstract MiP20132013Calzia E, Wagner K, Wagner F, Groeger M, Matallo J, McCook O, Wachter U, Vogt J, Radermacher P (2013) Studying mitochondrial effects of sulfide. Does the species matter? Mitochondr Physiol Network 18.08.LEAK
OXPHOS
ETS
Pig
Mouse
Liver
Salin 2013 Abstract MiP20132013Salin K, Luquet E, Rey B, Roussel D, Voituron Y (2013) Mitochondrial functioning, a proximate mechanism underlying the pace-of- life? Mitochondr Physiol Network 18.08.LEAK
OXPHOS
ETS
S
CIV
Isolated mitochondria
Enzyme
Oxidase;biochemical oxidation
Other mammals
Amphibians
Liver
Hendricks 2013 Abstract MiP20132013Hendricks E, Nathan BP, Menze MA (2013) Bioenergetics of permeabilized and intact nerve cell terminals from ApoE deficient and wild type mice. Mitochondr Physiol Network 18.08.LEAK
ROUTINE
OXPHOS
ETS
N
S
NS
Intact cells
Permeabilized cells
Isolated mitochondria
MouseNervous system
Oliveira MF 2013 Abstract MiP20132013Oliveira MF (2013) Comparative mitochondrial physiology in blood feeding insect vectors and parasites. Mitochondr Physiol Network 18.08.LEAK
ROUTINE
OXPHOS
ETS
F
N
S
Gp
CIV
ROX
Intact organism
Intact organ
Intact cells
Permeabilized cells
Permeabilized tissue
Homogenate
Human
Drosophila
Hexapods
Other invertebrates
Skeletal muscle
Neuroblastoma
Garcia-Souza 2013 Abstract IOC802013Garcia-Souza LF (2013) Thrombin trigger mitochondrial functional remodeling in human platelets. Mitochondr Physiol Network 18.09.LEAK
ROUTINE
ETS
Intact cellsHumanBlood cells
Jezek 2013 Abstract MiP20132013Ježek P, Ježek J, Zelenka J, Dlasková A, Jabůrek M (2013) Antioxidant synergy of mitochondrial uncoupling protein UCP2 and phospholipase iPLA2γ. Mitochondr Physiol Network 18.08.LEAK
ROUTINE
OXPHOS
ETS
N
S
ROX
Intact cells
Isolated mitochondria
MouseLung;gill
Islet cell;pancreas;thymus
Kressig 2013 Abstract IOC792013Kressig F (2013) et al. Mechanism of increased pulmonary vascular remodeling in UCP2 k/o mice. Mitochondr Physiol Network 18.07LEAKIsolated mitochondria
Permeabilized cells
MouseLung;gill
Other cell lines
Chicco 2013 Abstract MiP20132013Chicco AJ, Le CH, Schlater A, Kanatous S (2013) Comparative muscle mitochondrial physiology of the northern elephant seal. Mitochondr Physiol Network 18.08.LEAK
OXPHOS
ETS
F
N
Other combinations
Permeabilized tissueHuman
Other mammals
Skeletal muscle
Slinde 2013 Abstract MiP20132013Slinde E, Egelandsdal B, Olsen RE (2013) Respiration of tissue and mitochondria from Atlantic salmon (Salmo salar, L) liver, muscle, heart, brain and blood. Mitochondr Physiol Network 18.08.LEAK
OXPHOS
ETS
N
ROX
Permeabilized tissue
Isolated mitochondria
Other mammals
Fishes
Heart
Liver
Blood cells
Gomez Rodriguez 2013 Abstract IOC752013Gomez Rodriguez A (2013) ß-adrenergic receptor signaling interruption with two β-blockers (atenolol or nebivolol) can modify different oxidative stress related parameters linked to longevity in mouse liver. Mitochondr Physiol Network 18.03.LEAKIsolated mitochondriaMouseLiver
Palm 2013 Abstract MiP20132013Palm F, Hansell P, Friederich-Persson M (2013) Role of mitochondrial function for the onset and progression of kidney disease. Mitochondr Physiol Network 18.08.LEAK
OXPHOS
Intact organ
Intact cells
Isolated mitochondria
Mouse
Rat
Kidney
Laner 2013 ASMRM2013Laner V, Gradl P, Eigentler A, Fontana-Ayoub M, Fasching M, Gnaiger E (2013) The OROBOROS Oxygraph-2k for high-resolution respirometry and O2k-Fluorometry: a new quality in OXPHOS analysis. ASMRM2013.LEAK
OXPHOS
ETS
N
S
NS
HomogenateMouseHeart
Hand 2013 Abstract MiP20132013Hand SC, Patil Y (2013) Defense against ATP depletion during the energy-limited state of diapause. Mitochondr Physiol Network 18.08.LEAK
OXPHOS
ETS
N
S
Intact organism
Homogenate
Isolated mitochondria
Enzyme
Artemia
Crustaceans
Skulachev 2013 Abstract MiP20132013Skulachev VP (2013) SkQ1, the first mitochondria-targeted medicine available in drugstores. Mitochondr Physiol Network 18.08.LEAK
ETS
Intact organism
Intact cells
Isolated mitochondria
SMP
Human
Mouse
Horse
Dog
Rabbit
Fishes
Other invertebrates
Fungi
Plants
Heart
Skeletal muscle
Nervous system
Kidney
Islet cell;pancreas;thymus
Other cell lines
HeLa
Fibroblast
Stem cells
Dzialowski 2013 Abstract MiP20132013Dzialowski EM, Ream S, Duquaine A, Sirsat TS, Goy Sirsat SK (2013) Mitochondrial function and the development of endothermy in the precocial Pekin duck (Anas pekin). Mitochondr Physiol Network 18.08.LEAK
OXPHOS
ETS
F
N
S
NS
Intact organism
Permeabilized tissue
BirdsSkeletal muscle
Szibor 2013 Abstract MiP20132013Szibor M, Heidler J, Gizatullina Z, Salwig I, Dhandapani PK, Wittig I, Rustin P (2013) Expression of Ciona intestinalis alternative oxidase in mouse. Mitochondr Physiol Network 18.08.LEAK
OXPHOS
ROXIsolated mitochondria
Oxidase;biochemical oxidation
MouseHeart
Skeletal muscle
Nervous system
Liver
Lung;gill
Shabalina 2013 Abstract IOC792013Shabalina IG (2013) Enhanced Complex I but low Complex II substrate-derived ROS production rates in mice, prematurely aging due to enhanced mitochondrial DNA mutation rate. Mitochondr Physiol Network 18.07LEAK
OXPHOS
ETS
N
S
NS
Isolated mitochondriaMouseHeart
Skeletal muscle
Liver
Pichaud 2013 Abstract MiP20132013Pichaud N, Blier PU(2013) Importance of mitochondrial haplotypes in the expression of metabolic phenotypes under different conditions. Mitochondr Physiol Network 18.08.LEAK
OXPHOS
ETS
N
S
Gp
CIV
NS
ROX
Permeabilized tissueDrosophila
Hexapods
Skeletal muscle
Gnaiger 2013 Abstract ASMRM2013Gnaiger E(2013) Loss of mitochondrial competence and degenerative disease: cause and effect. Abstract ASMRM-Seoul.LEAK
OXPHOS
Human
Camacho-Pereira 2013 Abstract IOC752013Camacho-Pereira J (2013) CD38 as a regulator of mitochondrial function. Mitochondr Physiol Network 18.03.ETS
LEAK
OXPHOS
ROUTINE
N
NS
S
Intact cells
Isolated mitochondria
Permeabilized cells
MouseHEK
Liver
Macrophage-derived
Schulte 2013 Abstract MiP20132013Chung DJ, Schulte PM, Richards JG (2013) The effect of low-temperature acclimation on mitochondrial function in the common killifish (Fundulus heteroclitus), a top-down elasticity analysis. Mitochondr Physiol Network 18.08.LEAK
OXPHOS
Isolated mitochondriaFishesLiver
Scott 2013 Abstract MiP20132013Scott GR, Mahalingam S, McClelland GB(2013) Mitochondrial adaptations to hypoxia in high-altitude birds and mammals. Mitochondr Physiol Network 18.08.LEAK
OXPHOS
Isolated mitochondria
Enzyme
Other mammals
Birds
Skeletal muscle
Hickey 2013 Abstract MiP20132013Hickey AJ, Iftikar FI, MacDonald J, Baker D (2013) Mitochondria in a changing climate? The role of mitochondrial in hyperthermic heart failure in different fish species. Mitochondr Physiol Network 18.08.ETS
LEAK
OXPHOS
ROUTINE
CIV
N
NS
S
Permeabilized tissueFishes
Other mammals
Heart
Volska 2013 Abstract MiP20132013Volska K, Makrecka-Kuka M, Svalbe B, Dambrova M (2013) The inhibitor of L-carnitine biosynthesis protects brain mitochondria against anoxia-reoxygenation injury. Mitochondr Physiol Network 18.08.LEAK
OXPHOS
NIsolated mitochondriaRatNervous system
Amoedo 2013 Abstract MiP20132013Amoêdo ND, Rodrigues MF, Pereira S, Melo F, Jasiulionis M, Galina A, Rumjanek FD(2013) Comparative biochemistry of tumorigenesis: role of mitochondria in the metastatic process. Mitochondr Physiol Network 18.08.ETS
LEAK
OXPHOS
ROUTINE
N
ROX
S
Enzyme
Intact cells
Permeabilized cells
MouseEndothelial;epithelial;mesothelial cell
Other cell lines
Quistorff 2013 Abstract MiP20132013Quistorff B (2013) With type 2 diabetes mitochondrial dysfunction develops earlier in liver than in skeletal muscle. Mitochondr Physiol Network 18.08.LEAK
OXPHOS
F
S
Other combinations
RatSkeletal muscle
Liver
Gnaiger 2013 Abstract Mito20132013Gnaiger E, Søndergaard H, Munch-Andersen T, Damsgaard R, Hagen C, Díez-Sánchez C, Ara I, Wright-Paradis C, Schrauwen P, Hesselink M, Calbet J, Christiansen M, Helge JW, Saltin B, Boushel R (2013) Conserved mitochondrial coupling efficiency and adaptive substrate control in Inuit and Caucasians: adaptation and acclimatization to the Arctic winter.LEAK
OXPHOS
ETS
F
N
S
NS
Permeabilized tissueHumanSkeletal muscle
Menze 2013 Abstract MiP20132013Menze MA, Marunde MA, Samarajeewa DA, Anderson J, Li S, Hand SC (2013) Group1 LEA protein ameliorates inhibition of mitochondrial respiration in Drosophila melanogaster Kc167 cells and isolated mitochondria. Mitochondr Physiol Network 18.08.LEAK
ROUTINE
OXPHOS
NIntact organism
Intact cells
Permeabilized cells
Isolated mitochondria
Enzyme
Drosophila
Artemia
Crustaceans
Hexapods
Other cell lines
CHO
HEK
Macrophage-derived
Korzeniewski 2013 Abstract MiP20132013Korzeniewski B (2013) Regulation of oxidative phosphorylation during work transitions in different tissues results from its kinetic properties. Mitochondr Physiol Network 18.08.LEAK
OXPHOS
Heart
Skeletal muscle
Krumschnabel 2013 Abstract MiP20132013Krumschnabel G, Eigentler A, Fontana-Ayoub M, Draxl A, Fasching M, Gnaiger E (2013) Tissue homogenates for respiratory OXPHOS analysis in comparative mitochondrial physiology: mouse and trout – heart and liver. Mitochondr Physiol Network 18.08.LEAK
OXPHOS
ETS
N
S
NS
ROX
HomogenateMouse
Fishes
Heart
Nervous system
Liver
Irving 2013 Abstract MiP20132013Irving BA, Stahl R, Kane CJ, Chernousov M, Argyropoulos G, Carey D (2013) Sex differences in murine mitochondrial oxidative capacity following a 24 week high-fat diet. Mitochondr Physiol Network 18.08.LEAK
OXPHOS
ETS
N
NS
Permeabilized tissue
Homogenate
MouseSkeletal muscle
Liver
Fat
Cavalcanti de Albuquerque 2013 Abstract MiP20132013Cavalcanti de Albuquerque JP, Salvador IC, Martins EG, Jardim-Messeder D; Werneck de Castro JPS; Carvalho DP; Galina A (2013) Skeletal muscle mitochondrial function in ovariectomized rats: A time course study and the role of estrogen replacement. Mitochondr Physiol Network 18.08.LEAK
OXPHOS
ETS
F
N
S
Gp
NS
ROX
Intact organism
Permeabilized tissue
RatSkeletal muscle
Borutaite 2013 Abstract MiP20132013Borutaite V, Jablonskiene G, Arandarcikaite O (2013) Mitochondrial response to heart and brain ischemia. Mitochondr Physiol Network 18.08.LEAK
OXPHOS
N
S
Isolated mitochondriaPig
Rat
Heart
Nervous system
Rodrigues 2013 Abstract MiP20132013Rodrigues MF, Amoedo ND, Rumjanek FD (2013) Studies of bioenergetics alterations in breast cancer lines induced by histone desacetylase inhibitors. Mitochondr Physiol Network 18.08.LEAK
ROUTINE
ETS
ROXIntact cellsGenital
Gnaiger 2013 Abstract MiP20132013Gnaiger E, Søndergaard H, Munch-Andersen T, Damsgaard R, Hagen C, Díez-Sánchez C, Ara I, Wright-Paradis C, Schrauwen P, Hesselink M, Calbet J, Christiansen M, Helge JW, Saltin B, Boushel R (2013) Biochemical coupling efficiency in permeabilized fibres from arm and leg muscle in Inuit versus Caucasians: A functional test of the uncoupling hypothesis in Greenland. Mitochondr Physiol Network 18.08.LEAK
OXPHOS
ETS
F
N
S
NS
Permeabilized tissueHumanSkeletal muscle
Kotwica 2013 Abstract MiP20132013Kotwica AO, Horscroft JA, Murray AJ(2013) Mitochondrial respiration in heart and soleus of ob/ob mice. Mitochondr Physiol Network 18.08.LEAK
OXPHOS
F
N
S
Permeabilized tissueMouseHeart
Skeletal muscle
Pecina 2013 Abstract MiP20132013Pecina P, Houšťková H, Mráček T, Pecinová A, Nůsková H, Tesařová M, Hansíková H, Janota J, Zeman J, Houštěk J (2013) The use of lymphocytes for diagnostics of mitochondrial oxidative phosphorylation disorders. Mitochondr Physiol Network 18.08.LEAK
OXPHOS
ETS
N
S
Gp
NS
Other combinations
ROX
Permeabilized cells
Homogenate
HumanBlood cells
Lymphocyte
Garcia-Roves 2013 Abstract MiP20132013Garcia-Roves PM, Gonzalez-Franquesa A, Martinez-Navarro L, Fernandez-Ruiz R (2013) Metabolic flexibility before and after lifestyle intervention in a diet-induced type 2 diabetes animal model. Mitochondr Physiol Network 18.08.ETS
LEAK
OXPHOS
CIV
N
NS
S
Homogenate
Permeabilized cells
Permeabilized tissue
MouseFat
Islet cell;pancreas;thymus
Liver
Nervous system
Skeletal muscle
Galina 2013 Abstract MiP20132013Galina A, Messeder DJM, Camacho-Pereira J, Pereira da Silva AP, Rodrigues-Ferreira C (2013) Effects of antitumor alkylating agent 3-bromopyruvate on energy transducing pathways in hepatoma HepG2, liver mitochondria and SERCA: Is there any role for mitochondrial hexokinase activity? Mitochondr Physiol Network 18.08.LEAK
ROUTINE
OXPHOS
ETS
N
S
Intact cells
Permeabilized cells
Isolated mitochondria
Enzyme
RatSkeletal muscle
Nervous system
Liver
Other cell lines
Amoedo 2012 Abstract Bioblast2012Amoedo ND, Rodrigues MF, Pereira SAS, Melo FH, Jasiulionis MG, Galina A, Rumjanek FD (2012) Mitochondrial function and bioenergetics during malignant transformation and metastasis. Mitochondr Physiol Network 17.12.LEAK
ROUTINE
OXPHOS
ETS
SIntact cellsMouseOther cell lines
Harper 2012 Abstract Bioblast2012Harper ME, Yin H, Pasut A, Soleimani VD, Bentzinger CF, Antoun G, Thorn S, Seale P, Fernando P, Van IJcken W Frank Grosveld F, Dekemp RA, Boushel RC, Rudnicki MA (2012) Metabolic effects of microRNA-133 and its antagomir in mice. Mitochondr Physiol Network 17.12.LEAKIntact organism
Permeabilized cells
MouseSkeletal muscle
Fat
Horvath 2012 Abstract Bioblast2012Horvath G, Eigentler A, Gnaiger E, Tretter L (2012) Respiratory substrate effects on mitochondrial membrane potential - experiments with mouse cardiac muscle homogenate. Mitochondr Physiol Network 17.12.ETS
LEAK
OXPHOS
N
NS
S
HomogenateMouseHeart
Albertini 2012 Abstract Bioblast2012Albertini E, Koziel R, Duerr A, Neuhaus M, Jansen-Duerr P (2012) Cystathionine beta synthase modulates senescence of human endothelial cells. Mitochondr Physiol Network 17.12.LEAK
ROUTINE
ETS
Intact cellsEndothelial;epithelial;mesothelial cell
HUVEC
Labieniec-Watala 2012 Abstract Bioblast2012Labieniec-Watala M, Siewiera K, Watala C (2012) Seasonal fluctuations affect the physiology of laboratory animals – facts and artifacts from the perspective of heart mitochondrial respiratory response to tested compounds. Mitochondr Physiol Network 17.12.LEAK
OXPHOS
ETS
N
S
NS
Homogenate
Isolated mitochondria
Mouse
Rat
Heart
Liver
Fibroblast
Dzialowski 2012 Abstract IOC722012Dzialowski EM, Sirsat T, Goy S (2012) T3: Does it really make the alligator go “Tick, Tock”? Mitochondr Physiol Network 17.13.LEAK
OXPHOS
N
S
NS
Isolated mitochondriaReptilesHeart
Skeletal muscle
Jacobs 2012 Abstract Bioblast2012Jacobs R, Lundby C (2012) Mitochondria express enhanced quality as well as quantity in parallel with aerobic fitness across recreationally active individuals up to elite athletes. Mitochondr Physiol Network 17.12.ETS
LEAK
OXPHOS
F
N
NS
S
Permeabilized cellsHumanSkeletal muscle
Towheed 2012 Abstract IOC722012Towheed A (2012) Elucidating pathogenesis of ATP synthase dysfunction in a Drosophila model of mitochondrial encephalomyopathy. Mitochondr Physiol Network 17.13.LEAK
ROUTINE
OXPHOS
ETS
N
S
NS
Intact organism
Permeabilized tissue
Drosophila
Hexapods
Mark 2012 Abstract Bioblast2012Mark FC, Strobel A, Poertner HO (2012) Ocean warming and acidification – when fish mitochondria turn sour. Mitochondr Physiol Network 17.12.LEAK
ROUTINE
OXPHOS
N
S
CIV
NS
Permeabilized tissue
Isolated mitochondria
FishesHeart
Liver
Horscroft 2012 Abstract IOC722012Horscroft JA, Kotwica AO, Ashmore T, Colleoni F, Morash AJ, Gilbert E, Gnaiger E, Martin DS, Murray AJ (2012) Mitochondrial function at altitude in lowland Europeans and highland Sherpas. Mitochondr Physiol Network 17.13.LEAK
OXPHOS
ETS
N
NS
HumanSkeletal muscle
Rodrigues 2012 Abstract IOC722012Rodrigues MF, Amoedo ND, Rumjanek FD (2012) Studies of bioenergetics alterations in breast cancer lines induced by sodium butyrate. Mitochondr Physiol Network 17.13.LEAK
ROUTINE
ETS
Kamath 2012 Abstract IOC722012Kamath VG, Lizenby ZJ, Adusumilli VRKR, Hsiung CH, McKee EE (2012) Measuring mitochondrial OXPHOS as a nucleoside reverse transcriptase inhibitor induced cardiac toxicity endpoint. Mitochondr Physiol Network 17.13.LEAK
OXPHOS
ETS
Isolated mitochondriaRat
Doerrier 2012 Abstract Bioblast2012Doerrier C, Garcia JA, Escames G, Acuna-Castroviejo D (2012) Treatment with melatonin prevents myocardial mitochondrial dysfunction in experimental sepsis in mice. Mitochondr Physiol Network 17.12.LEAK
OXPHOS
ETS
N
S
NS
Permeabilized tissueMouseHeart
Hepple 2012 Abstract Bioblast2012Hepple RT, Picard M, Taivassalo T (2012) Is latent mitochondrial dysfunction in aging muscle exposed through mitochondrial isolation? Mitochondr Physiol Network 17.12.LEAK
OXPHOS
Permeabilized tissue
Isolated mitochondria
Skeletal muscle
Pesta 2011Abstract Mitochondrial Medicine-Training2011Pesta D, Hoppel F, Macek C, Messner H, Faulhaber M, Kobel C, Parson W, Burtscher M, Schocke M, Gnaiger E (2011) Mitochondrial improvements after strength, endurance, and intermittend hypoxic training in sedentary humans. A respiratory study on permeabilized muscle fibres. Abstract Mitochondrial Medicine Chicago.LEAK
OXPHOS
ETS
F
N
S
NS
ROX
Permeabilized tissueHumanSkeletal muscle
Gnaiger 2011 Abstract SMRM-Hyderabad2011Gnaiger E, Wright-Paradis C, Sondergaard H, Calbet J, Damsgaard R, Munck-Andersen T, Saltin B, Boushel RC (2011) Conserved mitochondrial coupling and adaptive substrate control in Inuit and Caucasians: Acclimatization to active life styles in the Arctic winter. Abstract SMRM-Hyderabad.LEAK
OXPHOS
Human
Sumbalova 2011 Abstract Mitochondrial Medicine2011Sumbalova Z, Fasching M, Gnaiger E (2011) Substrate control in mitochondrial respiration and regulation of mitochondrial membrane potential. Abstract Mitochondrial Medicine Chicago.LEAK
OXPHOS
ETS
N
S
NS
Homogenate
Isolated mitochondria
MouseNervous system
Borutaite MiP20102010Borutaite V, Cizas P, Morkuniene R, Budvytyte R (2010) Effect of beta amyloid oligomers on neuronal viability and mitochondrial functions.LEAKIsolated mitochondriaRatNervous system
Pesta 2010 MiP Abstract2010Pesta D, Faulhaber M, Burtscher M, Gnaiger E, Schocke M (2010) Investigation of muscle metabolism of the M. quadriceps via 31P MRS and high-resolution respirometry in connection with 10 weeks of strength and endurance training in normoxia and hypoxia. MiP2010.LEAK
OXPHOS
ETS
F
N
S
NS
Human