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 YearReferenceCouplingPathwayPreparationOrganismTissue;cell
Chekulayev 2015 Biochem Biophys Rep2015Chekulayev V, Mado K, Shevchuk I, Koit A, Kaldma A, Klepinin A, Timohhina N, Tepp K, Kandashvili M, Ounpuu L, Heck K, Truu L, Planken A, Valvere V, Kaambre T (2015) Metabolic remodeling in human colorectal cancer and surrounding tissues: alterations in regulation of mitochondrial respiration and metabolic fluxes. Biochem Biophys Rep 4:111-25.OXPHOSN
S
CIV
ROX
Permeabilized tissueHumanEndothelial;epithelial;mesothelial cell
Chen 2016 Nat Chem Biol2016Chen YJ, Mahieu NG, Huang X, Singh M, Crawford PA, Johnson SL, Gross RW, Schaefer J, Patti GJ (2016) Lactate metabolism is associated with mammalian mitochondria. Nat Chem Biol 12:937-43.LEAK
OXPHOS
ET
N
NS
ROX
Isolated mitochondriaHumanHeLa
Chen 2018 Endocrinology2018Chen Y, McCommis KS, Ferguson D, Hall AM, Harris CA, Finck BN (2018) Inhibition of the mitochondrial pyruvate carrier by tolylfluanid. Endocrinology 159:609-21.OXPHOSN
NS
Isolated mitochondriaMouseFat
Chen 2018 Hum Mol Genet2018Chen A, Tiosano D, Guran T, Baris HN, Bayram Y, Mory A, Shapiro-Kulnane L, Hodges CA, Coban Akdemir Z, Turan S, Jhangiani SN, van den Akker F, Hoppel CL, Salz HK, Lupski JR, Buchner DA (2018) Mutations in the mitochondrial ribosomal protein MRPS22 lead to primary ovarian insufficiency. Hum Mol Genet 27:1913-26.OXPHOS
ET
F
N
S
DQ
CIV
NS
Isolated mitochondriaHumanEndothelial;epithelial;mesothelial cell
Fibroblast
Chen 2020 Biochim Biophys Acta Mol Basis Dis2020Chen T, Hill JT, Moore TM, Cheung ECK, Olsen ZE, Piorczynski TB, Marriott TD, Tessem JS, Walton CM, Bikman BT, Hansen JM, Thomson DM (2020) Lack of skeletal muscle liver kinase B1 alters gene expression, mitochondrial content, inflammation and oxidative stress without affecting high-fat diet-induced obesity or insulin resistance. Biochim Biophys Acta Mol Basis Dis 1866:165805.LEAK
OXPHOS
ET
N
NS
ROX
Permeabilized tissueMouseSkeletal muscle
Cheng 2020 Am J Physiol Heart Circ Physiol2020Cheng TC, Philip JL, Tabima DM, Kumari S, Yakubov B, Frump AL, Hacker TA, Bellofiore A, Li R, Sun X, Goss KN, Lahm T, Chesler N (2020) Estrogen receptor alpha prevents right ventricular diastolic dysfunction and fibrosis in female rats . Am J Physiol Heart Circ Physiol 319:H1459-73.LEAK
OXPHOS
N
S
CIV
ROX
Permeabilized tissueRatHeart
Cheng 2021 Comp Biochem Physiol B Biochem Mol Biol2021Cheng H, Munro D, Huynh K, Pamenter ME (2021) Naked mole-rat skeletal muscle mitochondria exhibit minimal functional plasticity in acute or chronic hypoxia. Comp Biochem Physiol B Biochem Mol Biol 255:110596.OXPHOS
ET
LEAK
F
N
S
CIV
NS
ROX
Isolated mitochondriaOther mammalsSkeletal muscle
Cherix 2022 Mol Psychiatry2022Cherix A, Poitry-Yamate C, Lanz B, Zanoletti O, Grosse J, Sandi C, Gruetter R, Cardinaux JR (2022) Deletion of Crtc1 leads to hippocampal neuroenergetic impairments associated with depressive-like behavior. https://doi.org/10.1038/s41380-022-01791-5LEAK
OXPHOS
ET
N
S
NS
ROX
HomogenateMouseNervous system
Chiba 2019 J Am Soc Nephrol2019Chiba T, Peasley KD, Cargill KR, Maringer KV, Bharathi SS, Mukherjee E, Zhang Y, Holtz A, Basisty N, Yagobian SD, Schilling B, Goetzman ES, Sims-Lucas S (2019) Sirtuin 5 regulates proximal tubule fatty acid oxidation to protect against AKI. J Am Soc Nephrol 30:2384-98.OXPHOSN
S
HomogenateMouseKidney
Chicco 2013 Abstract IOC79Chicco AJ (2013) Substrate-specific impairment of oxidative phosphorylation in Tafazzin-deficient cardiac mitochondria: potential role of CoA deficiency. Mitochondr Physiol Network 18.07OXPHOSF
N
S
Permeabilized cells
Isolated mitochondria
MouseHeart
Chicco 2013 Abstract MiP2013Chicco AJ, Le CH, Schlater A, Kanatous S (2013) Comparative muscle mitochondrial physiology of the northern elephant seal. Mitochondr Physiol Network 18.08.LEAK
OXPHOS
ET
F
N
Other combinations
Permeabilized tissueHuman
Other mammals
Skeletal muscle
Chicco 2013 Abstract MiP2013 PosterChicco AJ, Claiborne MS, Le CH, Mulligan CM (2013) Remodeling of skeletal muscle mitochondria in response to exercise training in taz shRNA mouse model of human Barth Syndrome. Mitochondr Physiol Network 18.08.OXPHOSNIsolated mitochondriaMouseSkeletal muscle
Chicco 2014 J Exp Biol2014Chicco AJ, Le CH, Schlater AE, Nguyen AD, Kaye SD, Beals JW, Scalzo RL, Bell C, Gnaiger E, Costa DP, Crocker DE, Kanatous SB (2014) High fatty acid oxidation capacity and phosphorylation control despite elevated leak and reduced respiratory capacity in northern elephant seal muscle mitochondria. J Exp Biol 217:2947-55.LEAK
OXPHOS
ET
F
N
S
NS
Permeabilized tissueHuman
Other mammals
Skeletal muscle
Chicco 2016a Abstract MitoFit Science Camp 2016Oxygen dependence of H2O2 release from skeletal muscle and cardiac mitochondria: influence of sample preparation.OXPHOSNSPermeabilized tissue
Homogenate
Isolated mitochondria
MouseHeart
Skeletal muscle
Chicco 2016b Abstract MitoFit Science Camp 2016OXPHOS coupling efficiency of permeabilized muscle fibers predicts metabolic efficiency of subjects exercising at 5260 m.LEAK
OXPHOS
ET
F
N
Permeabilized tissueHumanSkeletal muscle
Chicco 2016c Abstract MitoFit Science Camp 2016Investigating the mechanism of cardiac mitochondrial respiratory impairment in Barth Syndrome.OXPHOSF
N
S
CIV
Other combinations
MouseHeart
Chicco 2018 J Biol Chem2018Chicco AJ, Le CH, Gnaiger E, Dreyer HC, Muyskens JB, D'Alessandro A, Nemkov T, Hocker AD, Prenni JE, Wolfe LM, Sindt NM, Lovering AT, Subudhi AW, Roach RC (2018) Adaptive remodeling of skeletal muscle energy metabolism in high-altitude hypoxia: Lessons from AltitudeOmics. J Biol Chem 293:6659-71.LEAK
OXPHOS
ET
F
N
S
Permeabilized tissueHumanSkeletal muscle
Chicco 2018 MiP2018a
Adam J Chicco

Maternal aging increases granulosa cell mitochondrial ROS release and reduces oocyte OXPHOS-linked respiration: implications for embryo development.

OXPHOS
ET
HorseGenital
Chicco 2018 MiP2018b
Adam J Chicco

Defective cardiolipin remodeling and cardiac mitochondrial dysfunction: supercomplexes or just complex?

OXPHOSF
N
NS
Permeabilized tissueMouseHeart
Chin 2015 US Patent2015Chin MT, Chien WM, Dinca A (2015) Modified tafazzin proteins and methods of making and using the same. US Patent US20150203827 A1.OXPHOSN
S
CIV
Permeabilized tissueMouseSkeletal muscle
Chin 2017 US Patent2017Chin MT, Chien WM, Dinca A (2017) Methods for treating and preventing cardiomyopathy. US Patent WO2016094791A1.LEAK
OXPHOS
ET
N
CIV
ROX
HomogenateMouseHeart
Chinas 2022 Metabolites2022ChiΓ±as Merlin A, Gonzalez K, Mockler S, Perez Y, Jia UA, Chicco AJ, Ullevig SL, Chung E (2022) Switching to a standard chow diet at weaning improves the effects of maternal and postnatal high-fat and high-sucrose diet on cardiometabolic health in adult male mouse offspring. https://doi.org/10.3390/metabo12060563LEAK
OXPHOS
F
N
NS
Isolated mitochondriaMouseHeart
Chinopoulos 2014 Methods Enzymol2014Chinopoulos C, Kiss G, Kawamata H, Starkov AA (2014) Measurement of ADP-ATP exchange in relation to mitochondrial transmembrane potential and oxygen consumption. Methods Enzymol 542:333-48. doi:10.1016/B978-0-12-416618-9.00017-0LEAK
OXPHOS
Permeabilized cellsHumanHEK
Chiurillo 2019 Mol Biol Cell2019Chiurillo MA, Lander N, Bertolini MS, Vercesi AE, Docampo R (2019) Functional analysis and importance for host cell infection of the Ca2+-conducting subunits of the mitochondrial calcium uniporter of Trypanosoma cruzi. Mol Biol Cell 30:1676-90.LEAK
OXPHOS
ET
SPermeabilized cellsProtists
Cho 2022 BMC Med2022Cho J, Johnson BD, Watt KD, Niven AS, Yeo D, Kim CH (2022) Exercise training attenuates pulmonary inflammation and mitochondrial dysfunction in a mouse model of high-fat high-carbohydrate-induced NAFLD. https://doi.org/10.1186/s12916-022-02629-1LEAK
OXPHOS
N
NS
HomogenateMouseLung;gill
Chojnacka 2022 Mol Biol Cell2022Chojnacka KJ, Elancheliyan P, Mussulini BHM, Mohanraj K, Callegari S, Gosk A, Banach T, GΓ³ral T, Szczepanowska K, Rehling P, Serwa RA, Chacinska A (2022) Ovarian carcinoma immunoreactive antigen-like protein 2 (OCIAD2) is a novel complex III-specific assembly factor in mitochondria. https://doi.org/10.1091/mbc.e21-03-0143LEAK
ROUTINE
OXPHOS
ET
F
N
S
Gp
CIV
NS
ROX
Permeabilized cells
Intact cells
HumanHEK
Chondronikola 2016 Cell Metab2016Chondronikola M, Volpi E, BΓΈrsheim E, Porter C, Saraf MK, Annamalai P, Yfanti C, Chao T, Wong D, Shinoda K, LabbΔ— SM, Hurren NM, Cesani F, Kajimura S, Sidossis LS. (2016) Brown adipose tissue activation is linked to distinct systemic effects on lipid metabolism in humans. Cell Metab 23:1200-6.LEAK
OXPHOS
Human
Chorner 2016 Am J Physiol Regul Integr Comp Physiol2016Chorner Z, Barbeau PA, Castellani L, Wright DC, Chabowski A, Holloway GP (2016) Dietary Ξ±-linolenic acid supplementation alters skeletal muscle plasma membrane lipid composition, sarcolemmal FAT/CD36 abundance, and palmitate transport rates. Am J Physiol Regul Integr Comp Physiol 311:R1234-42.LEAK
OXPHOS
F
N
NS
Isolated mitochondriaRatSkeletal muscle
Chou 2015 Fatty Acid Oxidation O2k-Network Discussion ForumChou 2015 Fatty Acid Oxidation O2k-Network Discussion ForumOXPHOS
ET
F
N
S
NS
ROX
Permeabilized cells
Permeabilized tissue
Blood cells
Lymphocyte
Platelet
Chou 2018 Int J Cardiol2018Chou CH, Fu TC, Tsai HH, Hsu CC, Wang CH, Wang JS (2018) High-intensity interval training enhances mitochondrial bioenergetics of platelets in patients with heart failure. Int J Cardiol 274:214-20.LEAK
ROUTINE
OXPHOS
ET
F
N
S
NS
ROX
Intact cells
Permeabilized cells
HumanPlatelet
Blood cells
Chowdhury 2000 Clin Chim Acta2000Chowdhury SK, Drahota Z, Floryk D, Calda P, Houstek J (2000) Activities of mitochondrial oxidative phosphorylation enzymes in cultured amniocytes. Clin Chim Acta 298:157-73.LEAK
ROUTINE
OXPHOS
N
S
CIV
Permeabilized cellsHumanEndothelial;epithelial;mesothelial cell
Fibroblast
Chowdhury 2005 Biochem Biophys Res Comm2005Chowdhury SK, Gemin A, Singh G (2005) High activity of mitochondrial glycerophosphate dehydrogenase and glycerophosphate-dependent ROS production in prostate cancer cell lines. Biochem Biophys Res Comm 333:1139-45.LEAK
OXPHOS
ET
GpPermeabilized cellsHumanGenital
Chowdhury 2010 Am J Physiol Endocrinol Metab2010Chowdhury SK, Sangle GV, Xie X, Stelmack GL, Halayko AJ, Shen GX (2010) Effects of extensively oxidized low-density lipoprotein on mitochondrial function and reactive oxygen species in porcine aortic endothelial cells. Am J Physiol Endocrinol Metab 298:E89-98.OXPHOSIntact cellsPigEndothelial;epithelial;mesothelial cell
Chowdhury 2010 Diabetes2010Chowdhury SK, Zherebitskaya E, Smith DR, Akude E, Chattopadhyay S, Jolivalt CG, Calcutt NA, Fernyhough P (2010) Mitochondrial respiratory chain dysfunction in dorsal root ganglia of streptozotocin-induced diabetic rats and its correction by insulin treatment. Diabetes 59:1082-91.LEAK
OXPHOS
N
CIV
Isolated mitochondriaRatNervous system
Chowdhury 2012 Brain2012Chowdhury SK, Smith DR, Saleh A, Schapansky J, Marquez A, Gomes S, Akude E, Morrow D, Calcutt NA, Fernyhough P (2012) Impaired adenosine monophosphate-activated protein kinase signalling in dorsal root ganglia neurons is linked to mitochondrial dysfunction and peripheral neuropathy in diabetes. Brain 135:1751-66.LEAK
OXPHOS
ET
Intact cellsMouse
Rat
Nervous system
Chowdhury 2015 Biosci Rep2016Chowdhury SK, Djordjevic J, Albensi B, Fernyhough P (2015) Simultaneous evaluation of substrate-dependent oxygen consumption rates and mitochondrial membrane potential by TMRM and safranin in cortical mitochondria. Biosci Rep 36:e00286.LEAK
OXPHOS
ET
N
S
NS
ROX
Homogenate
Isolated mitochondria
MouseNervous system
Chretien 2017 bioRxiv2017Chretien D, Benit P, Ha HH, Keipert S, El-Khoury R, Chang YT, Jastroch M, Jacobs H, Rustin P, Rak M (2017) Mitochondria are physiologically maintained at close to 50 C. bioRxiv doi: https://doi.org/10.1101/133223 .OXPHOSGpPermeabilized cellsHEK
Christen 2013 Abstract MiP2013Christen F, Desrosiers V, Blier PU (2013) Thermal sensitivity of mitochondria from arctic charr heart: Mitochondrial respiration and ROS production. Mitochondr Physiol Network 18.08.OXPHOS
ET
N
S
CIV
NS
ROX
Isolated mitochondriaOther mammals
Fishes
Heart
Christen 2018 Free Radic Biol Med2018Christen F, Desrosiers V, Dupont-Cyr BA, Vandenberg GW, Le François NR, Tardif JC, Dufresne F, Lamarre SG, Blier PU (2018) Thermal tolerance and thermal sensitivity of heart mitochondria: Mitochondrial integrity and ROS production. Free Radic Biol Med 116:11-8.LEAK
OXPHOS
ET
N
S
CIV
NS
ROX
Isolated mitochondriaFishesHeart
Christensen 2016 J Appl Physiol (1985)2016Christensen PM, Jacobs RA, Bonne T, FlΓΌck D, Bangsbo J, Lundby C (2016) A short period of high-intensity interval training improves skeletal muscle mitochondrial function and pulmonary oxygen uptake kinetics. J Appl Physiol (1985) 120:1319-27.LEAK
OXPHOS
ET
F
N
S
CIV
NS
Other combinations
ROX
Permeabilized tissueHumanSkeletal muscle
Christensen 2018 Diabetes Metab Res Rev2018Christensen M, Schiffer TA, Gustafsson H, Krag SP, NΓΈrregaard R, Palm F (2018) Metformin attenuates renal medullary hypoxia in diabetic nephropathy through uncoupling protein-2 inhibition. Diabetes Metab Res Rev 21:e3091.LEAK
OXPHOS
N
NS
Isolated mitochondriaRatKidney
Christian 2019 Respir Physiol Neurobiol2019Christian AR, Losantos-Ramos K, Marcelino G, Daniela F, Jorge S (2019) NADH-linked mitochondrial respiration in the developing mouse brain is sex-, age- and tissue-dependent. Respir Physiol Neurobiol 266:156-62.LEAK
OXPHOS
NPermeabilized tissueMouseNervous system
Christiansen 2015 Am J Physiol Heart Circ Physiol2015Christiansen LB, Dela F, Koch J, Hansen CN, Leifsson PS, Yokota T (2015) Impaired cardiac mitochondrial oxidative phosphorylation and enhanced mitochondrial oxidative stress in feline hypertrophic cardiomyopathy. Am J Physiol Heart Circ Physiol 308:H1237-47.LEAK
OXPHOS
ET
F
N
S
CIV
NS
ROX
Permeabilized tissue
Isolated mitochondria
CatHeart
Skeletal muscle
Christiansen 2015 J Vet Med Sci2015Christiansen LB, Dela F, Koch J, Yokota T (2015) Tissue-specific and substrate-specific mitochondrial bioenergetics in feline cardiac and skeletal muscles. J Vet Med Sci 77:669-75.LEAK
OXPHOS
ET
F
N
S
CIV
NS
Other combinations
ROX
Permeabilized tissueCatHeart
Skeletal muscle
Christiansen 2021 Sci Rep2021Christiansen LB, Dohlmann TL, Ludvigsen TP, Parfieniuk E, Ciborowski M, Szczerbinski L, Kretowski A, Desler C, Tiano L, Orlando P, Martinussen T, Olsen LH, Larsen S (2021) Atorvastatin impairs liver mitochondrial function in obese GΓΆttingen Minipigs but heart and skeletal muscle are not affected. Sci Rep 11:2167.LEAK
OXPHOS
ET
F
N
S
CIV
NS
Permeabilized tissuePigHeart
Skeletal muscle
Liver
Chroeis 2019 Basic Clin Pharmacol Toxicol2019Chroeis KM, Larsen S, Pedersen JS, Rygg MO, Boilsen AEB, Bendtsen F, Dela F (2019) Acetaminophen toxicity induces mitochondrial complex I inhibition in human liver tissue. https://doi.org/10.1111/bcpt.13304LEAK
OXPHOS
N
S
ROX
Intact cellsHumanLiver
Chroeis 2019 Eur J Sport Sci2019ChrΓΈis KM, Dohlmann TL, SΓΈgaard D, Hansen CV, Dela F, Helge JW, Larsen S (2019) Mitochondrial adaptations to high intensity interval training in older females and males. Eur J Sport Sci 20:135-45.LEAK
OXPHOS
ET
N
NS
Permeabilized tissueHumanSkeletal muscle
Chu 2013 PLoS One2013Chu MJ, Phillips AR, Hosking AW, Macdonald JR, Bartlett AS, Hickey AJ (2013) Hepatic mitochondrial function analysis using needle liver biopsy samples. PLoS One 8:e79097.LEAK
OXPHOS
ET
N
ROX
Permeabilized tissueHuman
Rat
Liver
Chu 2014 PLoS One2014Chu MJ, Hickey AJ, Tagaloa S, Zhang L, Dare AJ, MacDonald JR, Yeong ML, Bartlett AS, Phillips AR (2014) Ob/ob mouse livers show decreased oxidative phosphorylation efficiencies and anaerobic capacities after cold ischemia. PLoS One 9:e100609.LEAK
OXPHOS
ET
N
S
CIV
NS
Permeabilized tissueMouseLiver
Chu 2015 Liver Transpl2015Chu MJ, Hickey AJ, Jiang Y, Petzer A, Bartlett AS, Phillips AR (2015) Mitochondrial dysfunction in steatotic rat livers occurs because a defect in complex I makes the liver susceptible to prolonged cold ischemia. Liver Transpl 21:396-407.LEAK
OXPHOS
ET
N
S
ROX
HomogenateRatLiver
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