Category:Ambiguidity crisis - NAD and H+: Difference between revisions

Revision as of 20:58, 14 October 2023

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xx Anoar S, Woodling NS, Niccoli T (2021) Mitochondria dysfunction in frontotemporal dementia/amyotrophic lateral sclerosis: lessons from Drosophila models. Front Neurosci 15:786076. - »Bioblast link«

xx Bajeli S, Baid N, Kaur M, Pawar GP, Chaudhari VD, Kumar A (2020) Terminal respiratory oxidases: a targetables vulnerability of mycobacterial bioenergetics?. Front Cell Infect Microbiol 10:589318. - »Bioblast link«

xx Beier UH, Angelin A, Akimova T, Wang L, Liu Y, Xiao H, Koike MA, Hancock SA, Bhatti TR, Han R, Jiao J, Veasey SC, Sims CA, Baur JA, Wallace DC, Hancock WW (2015) Essential role of mitochondrial energy metabolism in Foxp3⁺ T-regulatory cell function and allograft survival. FASEB J 29:2315-26. - »Bioblast link«

xx Bennekou SH, van der Stel W, Carta G, Eakins J, Delp J, Forsby A, Kamp H, Gardner I, Zdradil B, Pastor M, Gomes JC, White A, Steger-Hartman T, Danen EHJ, Leist M, Walker P, Jennings P, van de Water B (2020) Case stuy on the use of integrated approaches to testing and assessment for mitochondrial Complex-III-mediated neurotoxicity of azoxystrobin - read-across to other strobilurins. OECD Environment, Health and Safety Publications Series on Testing and Assessment No. 327. ENV/JM/MONO(2020)23. - »Bioblast link«

xx Bețiu AM, Noveanu L, Hâncu IM, Lascu A, Petrescu L, Maack C, Elmér E, Muntean DM (2022) Mitochondrial effects of common cardiovascular medications: the good, the bad and the mixed. Int J Mol Sci 23:13653. - »Bioblast link«

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xx Black PA, Warren RM, Louw GE, van Helden PD, Victor TC, Kana BD (2014) Energy metabolism and drug efflux in Mycobacterium tuberculosis. Antimicrob Agents Chemother 58:2491-503. - »Bioblast link«

xx Bottje WG (2019) Oxidative metabolism and efficiency: the delicate balancing act of mitochondria. Poult Sci 98:4223-30. - »Bioblast link«

xx Branca JJV, Pacini A, Gulisano M, Taddei N, Fiorillo C, Becatti M (2020) Cadmium-induced cytotoxicity: effects on mitochondrial electron transport chain. Front Cell Dev Biol 8:604377. - »Bioblast link«

xx Bratic A, Larsson NG (2013) The role of mitochondria in aging. J Clin Invest 123:951-7. - »Bioblast link«

xx Brischigliaro M, Zeviani M (2021) Cytochrome c oxidase deficiency. Biochim Biophys Acta Bioenerg 1862:148335. - »Bioblast link«

xx Brzezinski P, Moe A, Ädelroth P (2021) Structure and mechanism of respiratory III-IV supercomplexes in bioenergetic membranes. Chem Rev 121:9644-73. - »Bioblast link«

xx Burgin HJ, McKenzie M (2020) Understanding the role of OXPHOS dysfunction in the pathogenesis of ECHS1 deficiency. FEBS Lett 594:590-610. - »Bioblast link«

xx Cadonic C, Sabbir MG, Albensi BC (2016) Mechanisms of mitochondrial dysfunction in Alzheimer's disease. Mol Neurobiol 53:6078-90. - »Bioblast link«

xx Cerqua C, Buson L, Trevisson E (2021) Mutations in assembly dactors required for the biogenesis of mitochondrial respiratory chain. Springer, Cham In: Navas P, Salviati L (eds) Mitochondrial diseases. - »Bioblast link«

xx Chavda V, Lu B (2023) Reverse electron transport at mitochondrial Complex I in ischemic stroke, aging, and age-related diseases. Antioxidants (Basel) 12:895. - »Bioblast link«

xx Chen TH, Koh KY, Lin KM, Chou CK (2022) Mitochondrial dysfunction as an underlying cause of skeletal muscle disorders. Int J Mol Sci 23:12926. - »Bioblast link«

xx Cojocaru KA, Luchian I, Goriuc A, Antoci LM, Ciobanu CG, Popescu R, Vlad CE, Blaj M, Foia LG (2023) Mitochondrial dysfunction, oxidative stress, and therapeutic strategies in diabetes, obesity, and cardiovascular disease. Antioxidants (Basel) 12:658. - »Bioblast link«

xx Cowan K, Anichtchik O, Luo S (2019) Mitochondrial integrity in neurodegeneration. CNS Neurosci Ther 25:825-36. - »Bioblast link«

xx Curtabbi A, Enríquez JA (2022) The ins and outs of the flavin mononucleotide cofactor of respiratory complex I. IUBMB Life 74:629-44. - »Bioblast link«

xx Diaz EC, Adams SH, Weber JL, Cotter M, Børsheim E (2023) Elevated LDL-C, high blood pressure, and low peak V˙O2 associate with platelet mitochondria function in children-The Arkansas Active Kids Study. Front Mol Biosci 10:1136975. - »Bioblast link«

xx DiMauro S, Rustin P (2009) A critical approach to the therapy of mitochondrial respiratory chain and oxidative phosphorylation diseases. Biochim Biophys Acta 1792:1159-67. - »Bioblast link«

xx Distelmaier F, Koopman WJ, van den Heuvel LP, Rodenburg RJ, Mayatepek E, Willems PH, Smeitink JA (2009) Mitochondrial complex I deficiency: from organelle dysfunction to clinical disease. Brain 132:833-42. - »Bioblast link«

xx Egan B, Sharples AP (2023) Molecular responses to acute exercise and their relevance for adaptations in skeletal muscle to exercise training. Physiol Rev 103:2057-2170. - »Bioblast link«

xx El-Gammal Z, Nasr MA, Elmehrath AO, Salah RA, Saad SM, El-Badri N (2022) Regulation of mitochondrial temperature in health and disease. Pflugers Arch 474:1043-51. - »Bioblast link«

xx Esterházy D, King MS, Yakovlev G, Hirst J (2008) Production of reactive oxygen species by complex I (NADH:ubiquinone oxidoreductase) from Escherichia coli and comparison to the enzyme from mitochondria. Biochemistry 47:3964-71. - »Bioblast link«

xx Faria R, Boisguérin P, Sousa Â, Costa D (2023) Delivery systems for mitochondrial gene therapy: a review. Pharmaceutics 15:572. - »Bioblast link«

xx Foo J, Bellot G, Pervaiz S, Alonso S (2022) Mitochondria-mediated oxidative stress during viral infection. Trends Microbiol 30:679-92. - »Bioblast link«

xx Friedman J, Mourokh L, Vittadello M (2021) Mechanism of proton pumping in Complex I of the mitochondrial respiratory chain. Quantum Reports 3:425-34. - »Bioblast link«

xx Gallinat A, Vilahur G, Padró T, Badimon L (2022) Network-assisted systems biology analysis of the mitochondrial proteome in a pre-clinical model of ischemia, revascularization and post-conditioning. Int J Mol Sci 23:2087. - »Bioblast link«

xx Gasmi A, Peana M, Arshad M, Butnariu M, Menzel A, Bjørklund G (2021) Krebs cycle: activators, inhibitors and their roles in the modulation of carcinogenesis. Arch Toxicol 95:1161-78. - »Bioblast link«

xx Grandoch M, Flögel U, Virtue S, Maier JK, Jelenik T, Kohlmorgen C, Feldmann K, Ostendorf Y, Castañeda TR, Zhou Z, Yamaguchi Y, Nascimento EBM, Sunkari VG, Goy C, Kinzig M, Sörgel F, Bollyky PL, Schrauwen P, Al-Hasani H, Roden M, Keipert S, Vidal-Puig A, Jastroch M5, Haendeler J, Fischer JW (2019) 4-Methylumbelliferone improves the thermogenic capacity of brown adipose tissue. Nat Metab 1:546-59. - »Bioblast link«

NADH is shown as the product of the reaction catalyzed by CI in respiration. This error is rare in the literature, but comparable to the error frequenty encountered when FADH₂ is shown as the substrate of CII.

d Hidalgo-Gutiérrez A, González-García P, Díaz-Casado ME, Barriocanal-Casado E, López-Herrador S, Quinzii CM, López LC (2021) Metabolic targets of coenzyme Q10 in mitochondria. Antioxidants (Basel) 10:520. - »Bioblast link«

xx Ježek P, Jabůrek M, Holendová B, Engstová H, Dlasková A (2023) Mitochondrial cristae morphology reflecting metabolism, superoxide formation, redox homeostasis, and pathology. Antioxid Redox Signal. https://doi.org/10.1089/ars.2022.0173 - »Bioblast link«

xx Joshi A, Ito T, Picard D, Neckers L (2022) The mitochondrial HSP90 paralog TRAP1: structural dynamics, interactome, role in metabolic regulation, and inhibitors. Biomolecules 12:880. - »Bioblast link«

xx Keidar N, Peretz NK, Yaniv Y (2023) Ca²⁺ pushes and pulls energetics to maintain ATP balance in atrial cells: computational insights. Front Physiol 14:1231259. - »Bioblast link«

xx Lancaster CR (2002) Succinate:quinone oxidoreductases: an overview. Biochim Biophys Acta 1553:1-6. - »Bioblast link«

fumarate + 2H⁺ shown besides NADH + H⁺ is ambiguous.

xx Lancaster CR (2001) Succinate:quinone oxidoreductases--what can we learn from Wolinella succinogenes quinol:fumarate reductase?. FEBS Lett 504:133-41. - »Bioblast link«

xx Lima A, Lubatti G, Burgstaller J, Hu D, Green AP, Di Gregorio A, Zawadzki T, Pernaute B, Mahammadov E, Perez-Montero S, Dore M, Sanchez JM, Bowling S, Sancho M, Kolbe T, Karimi MM, Carling D, Jones N, Srinivas S, Scialdone A, Rodriguez TA (2021) Cell competition acts as a purifying selection to eliminate cells with mitochondrial defects during early mouse development. Nat Metab 3:1091-108. - »Bioblast link«

xx Liu R, Jagannathan R, Sun L, Li F, Yang P, Lee J, Negi V, Perez-Garcia EM, Shiva S, Yechoor VK, Moulik M (2020) Tead1 is essential for mitochondrial function in cardiomyocytes. Am J Physiol Heart Circ Physiol 319:H89-99. - »Bioblast link«

xx Martell E, Kuzmychova H, Kaul E, Senthil H, Chowdhury SR, Morrison LC, Fresnoza A, Zagozewski J, Venugopal C, Anderson CM, Singh SK, Banerji V, Werbowetski-Ogilvie TE, Sharif T (2023) Metabolism-based targeting of MYC via MPC-SOD2 axis-mediated oxidation promotes cellular differentiation in group 3 medulloblastoma. Nat Commun 14:2502. - »Bioblast link«

xx Merlin J, Ivanov S, Dumont A, Sergushichev A, Gall J, Stunault M, Ayrault M, Vaillant N, Castiglione A, Swain A, Orange F, Gallerand A, Berton T, Martin JC, Carobbio S, Masson J, Gaisler-Salomon I, Maechler P, Rayport S, Sluimer JC, Biessen EAL, Guinamard RR, Gautier EL, Thorp EB, Artyomov MN, Yvan-Charvet L (2021) Non-canonical glutamine transamination sustains efferocytosis by coupling redox buffering to oxidative phosphorylation. Nat Metab 3:1313-26. - »Bioblast link«

xx Payen VL, Zampieri LX, Porporato PE, Sonveaux P (2019) Pro- and antitumor effects of mitochondrial reactive oxygen species. Cancer Metastasis Rev 38:189-203. - »Bioblast link«

xx Prasuhn J, Davis RL, Kumar KR (2021) Targeting mitochondrial impairment in Parkinson's disease: challenges and opportunities. Front Cell Dev Biol 8:615461. - »Bioblast link«

xx Puntel RL, Roos DH, Seeger RL, Rocha JB (2013) Mitochondrial electron transfer chain complexes inhibition by different organochalcogens. Toxicol In Vitro 27:59-70. - »Bioblast link«

κ Risiglione P, Leggio L, Cubisino SAM, Reina S, Paternò G, Marchetti B, Magrì A, Iraci N, Messina A (2020) High-resolution respirometry reveals MPP+ mitochondrial toxicity mechanism in a cellular model of parkinson's disease. Int J Mol Sci 21:E7809. - »Bioblast link«

xx Simon L, Molina PE (2022) Cellular bioenergetics: experimental evidence for alcohol-induced adaptations. Function (Oxf) 3:zqac039. - »Bioblast link«

ο Srivastava S (2016) Emerging therapeutic roles for NAD(+) metabolism in mitochondrial and age-related disorders. Clin Transl Med 5:25. - »Bioblast link«

xx Steiner JL, Lang CH (2017) Etiology of alcoholic cardiomyopathy: Mitochondria, oxidative stress and apoptosis. Int J Biochem Cell Biol 89:125-35. - »Bioblast link«

xx Toleikis A, Trumbeckaite S, Liobikas J, Pauziene N, Kursvietiene L, Kopustinskiene DM (2020) Fatty acid oxidation and mitochondrial morphology changes as key modulators of the affinity for ADP in rat heart mitochondria. Cells 9:340. - »Bioblast link«

xx Tseng W-W, Wei A-C (2022) Kinetic mathematical modeling of oxidative phosphorylation in cardiomyocyte mitochondria. Cells 11:4020. - »Bioblast link«

xx Turton N, Bowers N, Khajeh S, Hargreaves IP, Heaton RA (2021) Coenzyme Q10 and the exclusive club of diseases that show a limited response to treatment. Expert Opinion Orphan Drugs 9:151-60. - »Bioblast link«

υ Wang G, Feng H, Gao A, Hao Q, Jin W, Peng X, Li W, Wu G, Chu PK (2016) Extracellular electron transfer from aerobic bacteria to Au-loaded TiO2 semiconductor without light: a new bacteria-killing mechanism other than localized surface plasmon resonance or microbial fuel cells. ACS Appl Mater Interfaces 8:24509-16. - »Bioblast link«

xx Xing Yunxie (2022) Is genome instability a significant cause of aging? A review. Atlantis Press. - »Bioblast link«

i Yin M, O'Neill LAJ (2021) The role of the electron transport chain in immunity. FASEB J 35:e21974. - »Bioblast link«

xx Yusoff AAM, Ahmad F, Idris Z, Jaafar H, Abdullah JM (2015) Understanding mitochondrial DNA in brain tumorigenesis. In: Lichtor T, ed. Molecular considerations and evolving surgical management issues in the treatment of patients with a brain tumor. InTech: http://dx.doi.org/10.5772/58965 - »Bioblast link«

xx Zhao H, Li Y (2021) Cancer metabolism and intervention therapy. Mol Biomed 2:5. - »Bioblast link«

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@@ Line 52: / Line 52: @@
 :::::: [[File:Brzezinski 2021 Chem Rev CORRECTION.png|400px|link=Brzezinski 2021 Chem Rev]]
-:::: '''xx''' Brzezinski P, Moe A, Ädelroth P (2021) Structure and mechanism of respiratory III-IV supercomplexes in bioenergetic membranes. '''Chem Rev'' 121:9644-73. - [[Brzezinski 2021 Chem Rev |»Bioblast link«]]
+:::: '''xx''' Brzezinski P, Moe A, Ädelroth P (2021) Structure and mechanism of respiratory III-IV supercomplexes in bioenergetic membranes. '''Chem Rev''' 121:9644-73. - [[Brzezinski 2021 Chem Rev |»Bioblast link«]]
+<br>
+:::::: [[File:Burgin 2020 FEBS Lett CORRECTION.png|400px|link=Burgin 2020 FEBS Lett]]
+:::: '''xx''' Burgin HJ, McKenzie M (2020) Understanding the role of OXPHOS dysfunction in the pathogenesis of ECHS1 deficiency. '''FEBS Lett''' 594:590-610. - [[Burgin 2020 FEBS Lett |»Bioblast link«]]
 <br>
 :::::: [[File:Cadonic 2016 Mol Neurobiol CORRECTION.png|400px|link=Cadonic 2016 Mol Neurobiol]]
 :::: '''xx''' Cadonic C, Sabbir MG, Albensi BC (2016) Mechanisms of mitochondrial dysfunction in Alzheimer's disease. '''Mol Neurobiol''' 53:6078-90. - [[Cadonic 2016 Mol Neurobiol |»Bioblast link«]]
+<br>
+:::::: [[File:Cerqua 2021 Springer Cham CORRECTION.png|400px|link=Cerqua 2021 Springer, Cham]]
+:::: '''xx''' Cerqua C, Buson L, Trevisson E (2021) Mutations in assembly dactors required for the biogenesis of mitochondrial respiratory chain. '''Springer, Cham''' In: Navas P, Salviati L (eds) Mitochondrial diseases. - [[Cerqua 2021 Springer, Cham |»Bioblast link«]]
+<br>
+:::::: [[File:Chavda 2023 Antioxidants (Basel) CORRECTION.png|400px|link=Chavda 2023 Antioxidants (Basel)]]
+:::: '''xx''' Chavda V, Lu B (2023) Reverse electron transport at mitochondrial Complex I in ischemic stroke, aging, and age-related diseases. '''Antioxidants (Basel)''' 12:895. - [[Chavda 2023 Antioxidants (Basel) |»Bioblast link«]]
 <br>
@@ Line 65: / Line 77: @@
 :::::: [[File:Cojocaru 2023 Antioxidants (Basel) CORRECTION.png|400px|link=Cojocaru 2023 Antioxidants (Basel)]]
 :::: '''xx''' Cojocaru KA, Luchian I, Goriuc A, Antoci LM, Ciobanu CG, Popescu R, Vlad CE, Blaj M, Foia LG (2023) Mitochondrial dysfunction, oxidative stress, and therapeutic strategies in diabetes, obesity, and cardiovascular disease. '''Antioxidants (Basel)''' 12:658. - [[Cojocaru 2023 Antioxidants (Basel) |»Bioblast link«]]
+<br>
+:::::: [[File:Cowan 2019 CNS Neurosci Ther CORRECTION.png|400px|link=Cowan 2019 CNS Neurosci Ther]]
+:::: '''xx''' Cowan K, Anichtchik O, Luo S (2019) Mitochondrial integrity in neurodegeneration. '''CNS Neurosci Ther''' 25:825-36. - [[Cowan 2019 CNS Neurosci Ther |»Bioblast link«]]
+<br>
+:::::: [[File:Curtabbi 2022 IUBMB Life CORRECTION.png|400px|link=Curtabbi 2022 IUBMB Life]]
+:::: '''xx''' Curtabbi A, Enríquez JA (2022) The ins and outs of the flavin mononucleotide cofactor of respiratory complex I. '''IUBMB Life''' 74:629-44. - [[Curtabbi 2022 IUBMB Life |»Bioblast link«]]
 <br>
 :::::: [[File:Diaz 2023 Front Mol Biosci CORRECTION.png|400px|link=Diaz 2023 Front Mol Biosci]]
 :::: '''xx''' Diaz EC, Adams SH, Weber JL, Cotter M, Børsheim E (2023) Elevated LDL-C, high blood pressure, and low peak V˙O2 associate with platelet mitochondria function in children-The Arkansas Active Kids Study. '''Front Mol Biosci''' 10:1136975. - [[Diaz 2023 Front Mol Biosci |»Bioblast link«]]
+<br>
+:::::: [[File:Dimauro 2009 Biochim Biophys Acta CORRECTION.png|400px|link=Dimauro 2009 Biochim Biophys Acta]]
+:::: '''xx''' DiMauro S, Rustin P (2009) A critical approach to the therapy of mitochondrial respiratory chain and oxidative phosphorylation diseases. '''Biochim Biophys Acta''' 1792:1159-67. - [[Dimauro 2009 Biochim Biophys Acta |»Bioblast link«]]
 <br>
@@ Line 81: / Line 105: @@
 :::::: [[File:El-Gammal 2022 Pflugers Arch CORRECTION.png|400px|link=El-Gammal 2022 Pflugers Arch]]
 :::: '''xx''' El-Gammal Z, Nasr MA, Elmehrath AO, Salah RA, Saad SM, El-Badri N (2022) Regulation of mitochondrial temperature in health and disease. '''Pflugers Arch''' 474:1043-51. - [[El-Gammal 2022 Pflugers Arch |»Bioblast link«]]
+<br>
+:::::: [[File:Esterhazy 2008 Biochemistry CORRECTION.png|400px|link=Esterhazy 2008 Biochemistry]]
+:::: '''xx''' Esterházy D, King MS, Yakovlev G, Hirst J (2008) Production of reactive oxygen species by complex I (NADH:ubiquinone oxidoreductase) from Escherichia coli and comparison to the enzyme from mitochondria. '''Biochemistry''' 47:3964-71. - [[Esterhazy 2008 Biochemistry |»Bioblast link«]]
 <br>
 :::::: [[File:Faria 2023 Pharmaceutics CORRECTION.png|250px|link=Faria 2023 Pharmaceutics]]
 :::: '''xx''' Faria R, Boisguérin P, Sousa Â, Costa D (2023) Delivery systems for mitochondrial gene therapy: a review. '''Pharmaceutics''' 15:572. - [[Faria 2023 Pharmaceutics |»Bioblast link«]]
+<br>
+:::::: [[File:Foo 2022 Trends Microbiol CORRECTION.png|400px|link=Foo 2022 Trends Microbiol]]
+:::: '''xx''' Foo J, Bellot G, Pervaiz S, Alonso S (2022) Mitochondria-mediated oxidative stress during viral infection. '''Trends Microbiol''' 30:679-92. - [[Foo 2022 Trends Microbiol |»Bioblast link«]]
+<br>
+:::::: [[File:Friedman 2021 Quantum Reports CORRECTION.png|400px|link=Friedman 2021 Quantum Reports]]
+:::: '''xx''' Friedman J, Mourokh L, Vittadello M (2021) Mechanism of proton pumping in Complex I of the mitochondrial respiratory chain. '''Quantum Reports''' 3:425-34. - [[Friedman 2021 Quantum Reports |»Bioblast link«]]
+<br>
+:::::: [[File:Gallinat 2022 Int J Mol Sci CORRECTION.png|400px|link=Gallinat 2022 Int J Mol Sci]]
+:::: '''xx''' Gallinat A, Vilahur G, Padró T, Badimon L (2022) Network-assisted systems biology analysis of the mitochondrial proteome in a pre-clinical model of ischemia, revascularization and post-conditioning. '''Int J Mol Sci''' 23:2087. - [[Gallinat 2022 Int J Mol Sci |»Bioblast link«]]
 <br>