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Difference between revisions of "MitoPedia"

From Bioblast
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  The '''MitoPedia Glossaries''' are continuously developing in the spirit of [[Gentle Science]].  
  The '''MitoPedia Glossaries''' are continuously developing in the spirit of [[Gentle Science]].  


[[MitoPedia Glossary: Terms and abbreviations]]
[[MitoPedia Glossary: Terms and abbreviations]] - IUPAC guidelines are followed for general terms of physical chemistry<ref>Cohen ER, Cvitas T, Frey JG, Holmström B, Kuchitsu K, Marquardt R, Mills I, Pavese F, Quack M, Stohner J, Strauss HL, Takami M, Thor HL (2008) Quantities, Units and Symbols in Physical Chemistry, IUPAC Green Book, 3rd Edition, 2nd Printing, IUPAC & RSC Publishing, Cambridge. [[Cohen 2008 IUPAC Green Book | >>Open Access]]</ref>,<ref>International Union of Biochemistry and Molecular Biology: Recommendations for terminology and databases for biochemical thermodynamics. [http://www.chem.qmul.ac.uk/iubmb/thermod2/ >>Open Access]</ref>,<ref>International Union of Biochemistry (1981) Symbolism and terminology in enzyme kinetics. [http://www.chem.qmul.ac.uk/iubmb/kinetics/ >>Open Access]</ref>, extended by concepts of nonequilibrium thermodynamics.<ref>Gnaiger E (1993) Nonequilibrium thermodynamics of energy transformations. Pure Appl Chem 65: 1983-2002. [[Gnaiger 1993 Pure Appl Chem | >>Open Access]]</ref>.


'''MitoPedia Glossaries: Methods'''
=== MitoPedia Glossaries: Methods ===
* [[MitoPedia Glossary: Respirometry]]
* [[MitoPedia Glossary: Respirometry]]
* [[MitoPedia Glossary: Fluorometry]]
* [[MitoPedia Glossary: Fluorometry]]
* [[MitoPedia Glossary: Spectrophotometry]]  
* [[MitoPedia Glossary: Spectrophotometry]]  


'''MitoPedia Glossaries: Concepts'''
=== MitoPedia Glossaries: Concepts ===
* [[MitoPedia Glossary: Respiratory states]]
* [[MitoPedia Glossary: Respiratory states]]<ref> Gnaiger E (2012) Mitochondrial Pathways and Respiratory Control. An Introduction to OXPHOS Analysis. 3rd ed. Mitochondr Physiol Network 17.18. OROBOROS MiPNet Publications, Innsbruck: 64 pp. [[Gnaiger 2012 MitoPathways | >>'''Open Access''']]</ref>
 
* [[MitoPedia Glossary: Respiratory control ratios]]
* [[MitoPedia Glossary: Respiratory control ratios]]


* [[Mitochondria and bioblasts: History]]
* [[Mitochondria and bioblasts: History]]


'''MitoPedia Glossaries: Biochemistry'''
=== MitoPedia Glossaries: Biochemistry ===
* [[List of substrates and metabolites]]
* [[List of substrates and metabolites]]<ref> Pesta D, Gnaiger E (2012) High-resolution respirometry. OXPHOS protocols for human cells and permeabilized fibres from small biopisies of human muscle. Methods Mol Biol 810: 25-58. [[Pesta 2012 Methods Mol Biol | >>'''Bioblast Access''']]</ref>
* [[List of uncouplers]]
* [[List of uncouplers]]
* [[List of inhibitors]]
* [[List of inhibitors]]
* [[List of permeabilization agents]]
* [[List of permeabilization agents]]
* [[List of media for respirometry]]
* [[List of media for respirometry]]
* [[List of enzymes]]
* [[List of enzymes]]<ref>International Union of Biochemistry (1991) Nomenclature of electron-transfer proteins. Biochim Biophys Acta 1060. [http://www.chem.qmul.ac.uk/iubmb/etp/ >>Open Access]</ref>


'''MitoPedia Glossaries: Links'''
=== MitoPedia Glossaries: Links ===
* [[List of Links - Mitochondria: Structure and Function]]
* [[List of Links - Mitochondria: Structure and Function]]
* [[MtGlobal Organizations|Mitochondrial Global Network: List of MitoGlobal Organizations]]
* [[MtGlobal Organizations|Mitochondrial Global Network: List of MitoGlobal Organizations]]
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== References ==
== References ==
<references/>


# Cohen ER, Cvitas T, Frey JG, Holmström B, Kuchitsu K, Marquardt R, Mills I, Pavese F, Quack M, Stohner J, Strauss HL, Takami M, Thor HL (2008) Quantities, Units and Symbols in Physical Chemistry, IUPAC Green Book, 3rd Edition, 2nd Printing, IUPAC & RSC Publishing, Cambridge. [[Cohen 2008 IUPAC Green Book | >>Open Access]]
# International Union of Biochemistry and Molecular Biology: Recommendations for terminology and databases for biochemical thermodynamics. [http://www.chem.qmul.ac.uk/iubmb/thermod2/ >>Open Access]
# International Union of Biochemistry (1991) Nomenclature of electron-transfer proteins. Biochim Biophys Acta 1060. [http://www.chem.qmul.ac.uk/iubmb/etp/ >>Open Access]
# International Union of Biochemistry (1981) Symbolism and terminology in enzyme kinetics. [http://www.chem.qmul.ac.uk/iubmb/kinetics/ >>Open Access]
# Gnaiger E (1993) Nonequilibrium thermodynamics of energy transformations. Pure Appl Chem 65: 1983-2002. [[Gnaiger 1993 Pure Appl Chem | >>Open Access]]
# Gnaiger E (2012) Mitochondrial Pathways and Respiratory Control. An Introduction to OXPHOS Analysis. 3rd ed. Mitochondr Physiol Network 17.18. OROBOROS MiPNet Publications, Innsbruck: 64 pp. [[Gnaiger_2012_MitoPathways | >>Open Access]]





Revision as of 18:42, 21 April 2014

Template:Mainpage mitopedia

MitoPedia Glossaries

High-resolution terminology - matching measurements at high-resolution

The MitoPedia Glossaries are continuously developing in the spirit of Gentle Science. 

MitoPedia Glossary: Terms and abbreviations - IUPAC guidelines are followed for general terms of physical chemistry[1],[2],[3], extended by concepts of nonequilibrium thermodynamics.[4].

MitoPedia Glossaries: Methods

MitoPedia Glossaries: Concepts

MitoPedia Glossaries: Biochemistry

MitoPedia Glossaries: Links

OroboPedia

>> List of OROBOROS MiPNet Protcols

>> List of O2k-Publications:_Topics

References

  1. Cohen ER, Cvitas T, Frey JG, Holmström B, Kuchitsu K, Marquardt R, Mills I, Pavese F, Quack M, Stohner J, Strauss HL, Takami M, Thor HL (2008) Quantities, Units and Symbols in Physical Chemistry, IUPAC Green Book, 3rd Edition, 2nd Printing, IUPAC & RSC Publishing, Cambridge. >>Open Access
  2. International Union of Biochemistry and Molecular Biology: Recommendations for terminology and databases for biochemical thermodynamics. >>Open Access
  3. International Union of Biochemistry (1981) Symbolism and terminology in enzyme kinetics. >>Open Access
  4. Gnaiger E (1993) Nonequilibrium thermodynamics of energy transformations. Pure Appl Chem 65: 1983-2002. >>Open Access
  5. Gnaiger E (2012) Mitochondrial Pathways and Respiratory Control. An Introduction to OXPHOS Analysis. 3rd ed. Mitochondr Physiol Network 17.18. OROBOROS MiPNet Publications, Innsbruck: 64 pp. >>Open Access
  6. Pesta D, Gnaiger E (2012) High-resolution respirometry. OXPHOS protocols for human cells and permeabilized fibres from small biopisies of human muscle. Methods Mol Biol 810: 25-58. >>Bioblast Access
  7. International Union of Biochemistry (1991) Nomenclature of electron-transfer proteins. Biochim Biophys Acta 1060. >>Open Access