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{{#ask: [[Category:Publications]] [[Coupling states::OXPHOS]]
 |?Was published in year=Year
 |?Has title=Reference
 |?Coupling states=Coupling
 |?Pathways=Pathway
 |?Preparation
 |?Mammal and model=Organism
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{
    "query_string": "[[Category:Publications]] [[Coupling states::OXPHOS]]",
    "query_source": "SMWSQLStore",
    "query_time": "0.1911",
    "from_cache": false
}

	Year	Reference	Coupling	Pathway	Preparation	Organism	Tissue;cell
Davila 2018 Elife	2018	Davila A, Liu L, Chellappa K, Redpath P, Nakamaru-Ogiso E, Paolella LM, Zhang Z, Migaud ME, Rabinowitz JD, Baur JA (2018) Nicotinamide adenine dinucleotide is transported into mammalian mitochondria. Elife 7:e33246.	LEAK OXPHOS ET	N	Isolated mitochondria	Mouse	Skeletal muscle Liver
Davis 2018 FASEB J	2018	Davis RAH, Deemer SE, Bergeron JM, Little JT, Warren JL, Fisher G, Smith DL Jr, Fontaine KR, Dickinson SL, Allison DB, Plaisance EP (2018) Dietary R, S-1,3-butanediol diacetoacetate reduces body weight and adiposity in obese mice fed a high-fat diet. FASEB J 33:2409-21.	LEAK OXPHOS	N NS	Permeabilized tissue	Mouse	Skeletal muscle
Davis 2021 Comparative Exercise Physiology	2021	Davis Michael, Barrett Montana, Popken Andrea (2021) Effect of hyperthermia and acidosis on equine skeletal muscle mitochondrial oxygen consumption. Comparative Exercise Physiology 17:171-179.	LEAK OXPHOS ET	N S NS	Permeabilized cells	Horse	Skeletal muscle
Davis 2021 J Appl Physiol	2021	Davis MS, Barrett MR (2021) Effect of conditioning and physiology hyperthermia on canine skeletal muscle mitochondrial oxygen consumption. J Appl Physiol. 130:1317-1325	LEAK OXPHOS	N S NS	Permeabilized cells	Dog	Skeletal muscle
Davis 2023 Am J Physiol Regul Integr Comp Physiol .	2023	Davis MS, Bayly WM, Hansen CM, Barrett MR, Blake CA (2023) Effects of hyperthermia and acidosis on mitochondrial production of reactive oxygen species. Am J Physiol Regul Integr Comp Physiol . 325(6):R725-R734.	LEAK OXPHOS	N S NS	Isolated mitochondria	Horse	Skeletal muscle
Davis 2023 MitoFit	2023	Davis MS, Barrett MR, Bayly WM, Bolinger A (2023) Effect of selected fluorophores on equine skeletal muscle mitochondrial respiration. MitoFit Preprints 2023.5. https://doi.org/10.26124/mitofit:2023-0005 — 2024-04-25 published in Bioenerg Commun 2024.2.	LEAK OXPHOS	N S	Isolated mitochondria	Horse	Skeletal muscle
Davis 2024 BEC	2024	Davis MS, Barrett MR, Bayly WM, Bolinger A (2024) Effect of selected fluorophores on equine skeletal muscle mitochondrial respiration. Bioenerg Commun 2024.2. https://doi.org/10.26124/bec:2024-0002	LEAK OXPHOS	N S	Isolated mitochondria	Horse	Skeletal muscle
Davoudi 2014 PLoS One	2014	Davoudi M, Kotarsky H, Hansson E, Fellman V (2014) Complex I function and supercomplex formation are preserved in liver mitochondria despite progressive Complex III deficiency. PLoS One 9:e86767.	LEAK OXPHOS ET	N S ROX	Isolated mitochondria	Mouse	Liver
Davoudi 2014 PhD Thesis	2014	Davoudi M (2014) Effect of experimental complex III deficiency on respiratory chain assembly and function. PhD Thesis 1-65.	LEAK OXPHOS ET	N S	Isolated mitochondria	Mouse	Liver
Dawid 2020 Biochim Biophys Acta Bioenerg	2020	Dawid C, Weber D, Musiol E, Janas V, Baur S, Lang R, Fromme T (2020) Comparative assessment of purified saponins as permeabilization agents during respirometry. Biochim Biophys Acta Bioenerg 1861:148251.	LEAK ROUTINE OXPHOS ET	N S Gp NS ROX	Permeabilized cells Isolated mitochondria Intact cells	Human Mouse	Nervous system HEK
Dawson 2018 Acta Physiol (Oxf)	2018	Dawson NJ, Lyons SA, Henry DA, Scott GR (2018) Effects of chronic hypoxia on diaphragm function in deer mice native to high altitude. Acta Physiol (Oxf) 223:e13030.	LEAK OXPHOS	N CIV NS	Permeabilized tissue	Other mammals	Skeletal muscle
Dawson 2020 J Exp Biol	2020	Dawson NJ, Millet C, Selman C, Metcalfe NB (2020) Measurement of mitochondrial respiration in permeabilized fish gills. J Exp Biol 223:jeb216762.	LEAK OXPHOS	N CIV NS ROX	Permeabilized tissue	Fishes	Lung;gill
Dawson 2022 FASEB J	2022	Dawson NJ, Scott GR (2022) Adaptive increases in respiratory capacity and O₂ affinity of subsarcolemmal mitochondria from skeletal muscle of high-altitude deer mice. https://doi.org/10.1096/fj.202200219r	LEAK OXPHOS	F N CIV NS	Isolated mitochondria	Mouse	Skeletal muscle
De Andrade 2015 Exp Cell Res	2015	de Andrade DC, de Carvalho SN, Pinheiro D, Thole AA, Moura AS, de Carvalho L, Cortez EA (2015) Bone marrow mononuclear cell transplantation improves mitochondrial bioenergetics in the liver of cholestatic rats. Exp Cell Res 336:15-22.	LEAK OXPHOS	F NS	Permeabilized tissue	Rat	Liver
De Bari 2015 Abstract MiPschool London 2015		The mitochondrial metabolism of lactate isomers in human prostate cancer cells.	OXPHOS		Homogenate Isolated mitochondria	Human	Genital
De Carvalho 2016 J Cell Biochem	2016	de Carvalho AK, da Silva S, Serafini E, de Souza DR, Farias HR, de Bem Silveira G, Silveira PC, de Souza CT, Portela LV, Muller AP (2016) Prior exercise training prevent hyperglycemia in STZ mice by increasing hepatic glycogen and mitochondrial function on skeletal muscle. J Cell Biochem 118:678-85.	LEAK OXPHOS	S	Homogenate	Mouse	Skeletal muscle Liver
De Carvalho 2017 Toxicol Research	2017	de Carvalho NR, Rodrigues NR, Macedo GE, Boligon AA, de Campos MM, Posser T, Cunha FAB, Coutinho HD, Klamt F, Bristot IJ, Merritt TJS, Franco JL (2017) Eugenia uniflora leaves essential oil promotes mitochondrial dysfunction in Drosophila melanogaster through the inhibition of oxidative phosphorylation. Toxicol Research 6:526-34 .	LEAK OXPHOS ET	F N NS ROX S	Isolated mitochondria	Drosophila
De Castro IP 2013 Cell Death Dis	2013	de Castro IP, Costa AC, Celardo I, Tufi R, Dinsdale D, Loh SH, Martins LM (2013) Drosophila ref(2)P is required for the parkin-mediated suppression of mitochondrial dysfunction in pink1 mutants. Cell Death Dis 24:e873.	LEAK OXPHOS ET	N S	Homogenate	Drosophila
De Cavanagh 2008 Exp Gerontol	2008	de Cavanagh EM, Flores I, Ferder M, Inserra F, Ferder L (2008) Renin-angiotensin system inhibitors protect against age-related changes in rat liver mitochondrial DNA content and gene expression. Exp Gerontol 43:919-28.	OXPHOS			Rat	Liver
De Goede 2018 MiP2018		Timing of feeding behavior affects daily rhythms in body temperature and muscle mitochondrial metabolism.	OXPHOS ET		Permeabilized tissue	Rat	Skeletal muscle
De Goede 2022 FASEB J	2022	de Goede P, Wüst RCI, Schomakers BV, Denis S, Vaz FM, Pras-Raves ML, van Weeghel M, Yi CX, Kalsbeek A, Houtkooper RH (2022) Time-restricted feeding during the inactive phase abolishes the daily rhythm in mitochondrial respiration in rat skeletal muscle. FASEB J 36:e22133.	LEAK OXPHOS ET	N S NS ROX	Permeabilized tissue	Rat	Skeletal muscle
De Jong 2022 Nutrients	2022	De Jong NP, Rudolph MC, Jackman MR, Sharp RR, Jones K, Houck J, Pan Z, Reusch JEB, MacLean PS, Bessesen DH, Bergouignan A (2022) Short-term adaptations in skeletal muscle mitochondrial oxidative capacity and metabolic pathways to breaking up sedentary behaviors in overweight or obese adults. https://doi.org/10.3390/nu14030454	LEAK OXPHOS ET	F N S NS ROX	Permeabilized tissue	Human	Skeletal muscle
De Lazzari 2022 Neurobiol Dis	2022	De Lazzari F, Agostini F, Plotegher N, Sandre M, Greggio E, Megighian A, Bubacco L, Sandrelli F, Whitworth AJ, Bisaglia M (2022) DJ-1 promotes energy balance by regulating both mitochondrial and autophagic homeostasis. https://doi.org/10.1016/j.nbd.2022.105941	OXPHOS	N S	Homogenate	Drosophila
De Lourdes Jorge 2017 Transplant Proc	2017	de Lourdes Jorge G, Dos Reis Tártaro R, Fazzio Escanhoela CA, Boin IFSF (2017) Later evaluation of ischemia and reperfusion by the Pringle maneuver in Wistar rats, demonstrating that hepatic lesions can be reversible. Transplant Proc 49:898-901.	LEAK OXPHOS ET	N	Intact cells	Rat	Liver
De Medeiros 2018 Biochim Biophys Acta	2018	de Medeiros WA, da Silva LA, Dall'Igna DM, Michels M, Manfredini A, Dos Santos Cardoso J, Constantino L, Scaini G, Vuolo F, Streck EL, Ritter C, Dal-Pizzol F (2018) N-acetylcysteine effects on a murine model of chronic critical limb ischemia. Biochim Biophys Acta 1864:454-63.	OXPHOS	F N NS		Rat
De Meis 2010 PLoS One	2010	De Meis L, Ketzer LA, da Costa RM, de Andrade IR, Benchimol M (2010) Fusion of the endoplasmic reticulum and mitochondrial outer membrane in rats brown adipose tissue: activation of thermogenesis by Ca²⁺. PLoS One 5:e9439.	OXPHOS		Isolated mitochondria	Rat	Fat
De Moura 2017 Neurotox Res	2017	de Moura Alvorcem L, da Rosa MS, Glänzel NM, Parmeggiani B, Grings M, Schmitz F, Wyse ATS, Wajner M, Leipnitz G (2017) Disruption of energy transfer and redox status by sulfite in hippocampus, striatum, and cerebellum of developing rats. Neurotox Res 32:264-75.	LEAK OXPHOS ET	N S NS	Homogenate	Rat	Nervous system
De Moura Alvorcem 2018 Mitochondrion	2018	De Moura Alvorcem L, Britto R, Parmeggiani B, Glanzel NM, Da Rosa-Junior NT, Cecatto C, Bobermin LD, Amaral AU, Wajner M, Leipnitz G (2018) Evidence that thiol group modification and reactive oxygen species are involved in hydrogen sulfide-induced mitochondrial permeability transition pore opening in rat cerebellum. Mitochondrion 47:141-50.	LEAK OXPHOS ET	N S NS	Isolated mitochondria Intact cells	Rat	Nervous system
De Moura Alvorcem 2021 J Neurochem	2021	de Moura Alvorcem, L, Britto R, Cecatto C, Roginski AC, Rohden F, Scholl JN, Guma FCR, Figueiro F, Amaral AU, Zanatta G, Seminotti B, Wajner M, Leipnitz G. (2021) Ethylmalonic acid impairs bioenergetics by disturbing succinate and glutamate oxidation and induces mitochondrial permeability transition pore opening in rat cerebellum. J Neurochem 158(2): 262–81.	LEAK OXPHOS	N S	Homogenate Isolated mitochondria	Rat	Nervous system
De Moura Escobar 2019 Toxicol In Vitro	2019	de Moura Escobar SJ, Simone M, de Oliveira Ribeiro CA, Martinez GR, Winnischofer SMB, Witting PK, Rocha MEM (2019) Cytotoxic effects of 4'-hydroxychalcone on human neuroblastoma cells (SH-SY5Y). Toxicol In Vitro 61:104640.	LEAK OXPHOS	N S ROX	Permeabilized cells	Human	Neuroblastoma
De Oliveira 2014 Cell Tiss Res	2014	De Oliveira GP, Cortez E, Araujo GJ, de Carvalho Sabino KC, Neves FA, Bernardo AF, de Carvalho SN, Moura AS, Carvalho L, Thole AA (2014) Impaired mitochondrial function and reduced viability in bone marrow cells of obese mice. Cell Tiss Res 357:185-94.	LEAK ROUTINE OXPHOS	NS	Permeabilized cells	Mouse	Stem cells
De Palma 2014 Skelet Muscle	2014	De Palma C, Morisi F, Pambianco S, Assi E, Touvier T, Russo S, Perrotta C, Romanello V, Carnio S, Cappello V, Pellegrino P, Moscheni C, Bassi MT, Sandri M, Cervia D, Clementi E (2014) Deficient nitric oxide signalling impairs skeletal muscle growth and performance: involvement of mitochondrial dysregulation. Skelet Muscle 4:22.	LEAK OXPHOS ET	N S CIV NS	Permeabilized tissue Isolated mitochondria	Mouse	Skeletal muscle
De Paula Nascimento-Castro 2022 Biomedicines	2022	de Paula Nascimento-Castro C, Winkelmann-Duarte EC, Mancini G, Welter PG, Plácido E, Farina M, Gil-Mohapel J, Rodrigues ALS, de Bem AF, Brocardo PS (2022) Temporal characterization of behavioral and hippocampal dysfunction in the YAC128 mouse model of Huntington's disease. https://doi.org/10.3390/biomedicines10061433	LEAK OXPHOS ET	N S NS ROX	Homogenate	Mouse	Nervous system
De Sousa 2014 Stem Cells	2014	De Sousa M, Porras DP, Perry CG, Seale P, Scimè A. (2014) p107 is a crucial regulator for determining the adipocyte lineage fate choices of stem cells. Stem Cells 32:1323-36.	LEAK OXPHOS	N NS	Permeabilized cells	Mouse	Other cell lines
De Souza 2012 Lipids	2012	de Souza Pinto R, Castilho G, Paim BA, Machado-Lima A, Inada NM, Nakandakare ER, Vercesi AE, Passarelli M (2012) Inhibition of macrophage oxidative stress prevents the reduction of ABCA-1 transporter induced by advanced glycated albumin. Lipids 47:443-50.	OXPHOS
De Velasco 2017 Br J Nutr	2017	de Velasco PC, Chicaybam G, Ramos-Filho DM, Dos Santos RMAR, Mairink C, Sardinha FLC, El-Bacha T, Galina A, Tavares-do-Carmo MDG (2017) Maternal intake of trans-unsaturated or interesterified fatty acids during pregnancy and lactation modifies mitochondrial bioenergetics in the liver of adult offspring in mice. Br J Nutr 118:41-52.	LEAK OXPHOS ET	N NS ROX	Isolated mitochondria	Mouse	Liver
De-Souza 2020 J Biol Chem	2020	De-Souza EA, Pimentel FSA, De-Queiroz ALFV, Camara H, Felix-Formiga ML, Machado CM, Pinto S, Galina A, Mori MA, Montero-Lomelí M, Masuda CA (2020) The yeast protein Ubx4p contributes to mitochondrial respiration and lithium-galactose-mediated activation of the unfolded protein response. J Biol Chem 295:3773-82.	LEAK OXPHOS	N Gp NS ROX	Isolated mitochondria Intact cells	Caenorhabditis elegans Saccharomyces cerevisiae
De-Souza-Ferreira 2019 J Neurochem	2019	de-Souza-Ferreira E, Rios-Neto IM, Martins EL, Galina A (2019) Mitochondria-coupled glucose phosphorylation develops after birth to modulate H₂O₂ release and calcium handling in rat brain. J Neurochem 149:624-40.	LEAK OXPHOS ET	N Gp CIV NS	Isolated mitochondria	Rat	Nervous system
DeLany 2013 TOS		Skeletal muscle mitochondrial respiration is lower in African American compared to Caucasian women and is associated with resting metabolic rate and cardiorespiratory fitness.	LEAK OXPHOS		Permeabilized tissue	Human	Skeletal muscle
DeLany 2014 J Clin Endocrinol Metab	2014	DeLany JP, Dube JJ, Standley RA, Distefano G, Goodpaster BH, Stefanovic-Racic M, Coen PM, Toledo FG (2014) Racial differences in peripheral insulin sensitivity and mitochondrial capacity in the absence of obesity. J Clin Endocrinol Metab 99:4307-14.	LEAK OXPHOS ET	Other combinations	Permeabilized tissue	Human	Skeletal muscle
Dechandt 2016 Anal Biochem	2016	Dechandt CRP, Couto-Lima CA, Alberici LC (2016) Triglyceride depletion of brown adipose tissue enables analysis of mitochondrial respiratory function in permeabilized biopsies. Anal Biochem 515:55-60.	LEAK OXPHOS ET	N S ROX	Permeabilized tissue	Rat	Fat
Dechandt 2018 Am J Physiol Regul Integr Comp Physiol	2018	Dechandt CR, Vicentini TM, Lanfredi GP, da Silva RMP Jr, Espreafico EM, de Oliveira JAC, Faça VM, Garcia-Cairasco N, Alberici LC (2018) The highly efficient power house in the Wistar Audiogenic Rat (WAR), an epileptic rat strain. Am J Physiol Regul Integr Comp Physiol 316:R243-R254.	LEAK OXPHOS ET	N ROX	Permeabilized tissue Isolated mitochondria	Rat	Heart Skeletal muscle Liver
Dechandt 2019 Front Neurol	2019	Dechandt CRP, Ferrari GD, Dos Santos JR, de Oliveira JAC, da Silva-Jr RMP, Cunha AOS, Garcia-Cairasco N, Alberici LC (2019) Energy metabolism and redox state in brains of wistar audiogenic rats, a genetic model of epilepsy. Front Neurol 10:1007.	LEAK OXPHOS ET	N ROX	Permeabilized tissue	Rat	Nervous system
Deckers 2014 FEBS Lett	2014	Deckers M, Balleininger M, Vukotic M, Roempler K, Bareth B, Juris L, Dudek J (2014) Aim24 stabilizes respiratory chain supercomplexes and is required for efficient respiration. FEBS Lett 588:2985-92.	LEAK OXPHOS	S	Isolated mitochondria	Saccharomyces cerevisiae
Dejean 2000 Biochim Biophys Acta	2000	Dejean L, Beauvoit B, Guérin B, Rigoulet M (2000) Growth of the yeast Saccharomyces cerevisiae on a non-fermentable substrate: Control of energetic yield by the amount of mitochondria. Biochim Biophys Acta 1457:45-56.	OXPHOS		Intact cells	Saccharomyces cerevisiae Fungi
Dejean 2001 Biochim Biophys Acta	2001	Dejean L, Beauvoit B, Bunoust O, Fleury B, Guérin B, Rigoulet M (2001) The calorimetric-respirometric ratio is an on-line marker of enthalpy efficiency of yeast cells growing on a non-fermentable carbon source. Biochim Biophys Acta 1503:329-40.	OXPHOS			Fungi
Dejean 2002 Biochem Biophys Res Comm	2002	Dejean L, Beauvoit B, Bunoust O, Guerin B, Rigoulet M (2002) Activation of Ras cascade increases the mitochondrial enzyme content of respiratory competent yeast. Biochem Biophys Res Comm 293:1383-8.	OXPHOS		Intact cells	Saccharomyces cerevisiae Fungi
Dejmek 2018 Physiol Res	2018	Dejmek J, Kohoutová M, Kripnerová M, Čedíková M, Tůma Z, Babuška V, Bolek L, Kuncová J (2018) Repeated exposure to hyperbaric hyperoxia affects mitochondrial functions of the lung fibroblasts. Physiol Res 67(Suppl 4):S633-S643.	LEAK ROUTINE OXPHOS ET	F N S CIV NS ROX	Permeabilized cells Intact cells	Human	Lung;gill Fibroblast
Dejos 2018 Sci Rep	2018	Dejos C, Kuny S, Han WH, Capel H, Lemieux H, Sauvé Y (2018) Photoreceptor-induced RPE phagolysosomal maturation defects in Stargardt-like Maculopathy (STGD3). Sci Rep 8:5944.	OXPHOS	N S CIV NS ROX	Homogenate	Mouse	Endothelial;epithelial;mesothelial cell
Dela 2013 Abstract MiP2013		Dela F (2013) Glucose tolerance and skeletal muscle coenzyme Q(10). Mitochondr Physiol Network 18.08.	OXPHOS	N S NS	Permeabilized tissue	Human	Skeletal muscle