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 YearReferenceCouplingPathwayPreparationOrganismTissue;cell
Chu 2016 World J Gastroenterol2016Chu MJ, Premkumar R, Hickey AJ, Jiang Y, Delahunt B, Phillips AR, Bartlett A (2016) Steatotic livers are susceptible to normothermic ischemia-reperfusion injury from mitochondrial Complex-I dysfunction. World J Gastroenterol 22:4673-84.LEAK
OXPHOS
ET
N
S
NS
ROX
HomogenateRatLiver
Chung 2017 Sci Rep2017Chung DJ, Morrison PR, Bryant HJ, Jung E, Brauner CJ, Schulte PM (2017) Intraspecific variation and plasticity in mitochondrial oxygen binding affinity as a response to environmental temperature. Sci Rep 7:16238.OXPHOSF
N
NS
Isolated mitochondriaFishesLiver
Chung 2018 Integr Comp Biol2018Chung DJ, Healy TM, McKenzie JL, Chicco AJ, Sparagna GC, Schulte PM (2018) Mitochondria, temperature, and the pace of life. Integr Comp Biol 58:578-90.OXPHOSNPermeabilized tissue
Isolated mitochondria
FishesHeart
Nervous system
Liver
Chung 2018 J Exp Biol2018Chung DJ, Sparagna GC, Chicco AJ, Schulte PM (2018) Patterns of mitochondrial membrane remodeling parallel functional adaptations to thermal stress. J Exp Biol 221. pii: jeb174458.LEAK
OXPHOS
ET
F
N
S
CIV
NS
ROX
Isolated mitochondriaFishesLiver
Chweih 2015 Exp Physiol2015Chweih H, Castilho RF, Figueira TR (2015) Tissue and sex specificities in Ca(2+) handling by isolated mitochondria in conditions avoiding the permeability transition. Exp Physiol 100(9):1073-92.LEAK
OXPHOS
NIsolated mitochondriaRatHeart
Skeletal muscle
Nervous system
Liver
Ciapaite 2015 Fatty Acid Oxidation O2k-Network Discussion ForumCiapaite 2015 Fatty Acid Oxidation O2k-Network Discussion ForumLEAK
OXPHOS
ET
FPermeabilized tissueHuman
Rat
Skeletal muscle
Ciccone 2024 J Exp Biol2024Ciccone C, Kante F, Folkow LP, Hazlerigg DG, West AC, Wood SH (2024) Circadian coupling of mitochondria in a deep-diving mammal. J Exp Biol 227:jeb24699. https://doi.org/10.1242/jeb.246990LEAK
ROUTINE
OXPHOS
ET
N
S
NS
Permeabilized cells
Intact cells
Other mammalsFibroblast
Cikankova 2019 Naunyn Schmiedebergs Arch Pharmacol2019Cikánková T, Fišar Z, Bakhouche Y, Ľupták M, Hroudová J (2019) In vitro effects of antipsychotics on mitochondrial respiration. Naunyn Schmiedebergs Arch Pharmacol 392:1209-23.OXPHOSN
S
ROX
Isolated mitochondriaPigNervous system
Cipullo 2020 Nucleic Acids Res2020Cipullo M, Pearce SF, Lopez Sanchez IG, Gopalakrishna S, Krüger A, Schober F, Busch JD, Li X, Wredenberg A, Atanassov I, Rorbach J (2020) Human GTPBP5 is involved in the late stage of mitoribosome large subunit assembly. Nucleic Acids Res 49:354-70.LEAK
ROUTINE
OXPHOS
ET
N
S
NS
ROX
Permeabilized cells
Intact cells
HumanHEK
Civiletto 2018 EMBO Mol Med2018Civiletto G, Dogan SA, Cerutti R, Fagiolari G, Moggio M, Lamperti C, Benincá C, Viscomi C, Zeviani M (2018) Rapamycin rescues mitochondrial myopathy via coordinated activation of autophagy and lysosomal biogenesis. EMBO Mol Med 10:e8799.OXPHOSS
CIV
Isolated mitochondriaMouseSkeletal muscle
Cizkova 2008 Nat Genet2008Cızkova A, Stranecky V, Mayr JA, Tesarova M, Havlıckova V, Paul J, Ivanek R, Kuss AW, Hansıkova H, Kaplanova W, Vrbacky M, Hartmannova H, Noskova L, Honzık T, Drahota Z, Magner M, Hejzlarova K, Sperl W, Zeman J, Houstek J, Kmoch S (2008) TMEM70 mutations cause isolated ATP synthase deficiency and neonatal mitochondrial encephalocardiomyopathy. Nat Genet 40:1288-90.OXPHOSIsolated mitochondria
Claiborne 2013 Thesis2013Claiborne MS (2013) Exercice Training improves exercice capacity despite present muscle mitochondrial dysfunction in the TAZ shRNA mouse model of human barth syndrome. Master's Thesis 67pp.LEAK
OXPHOS
ET
NIsolated mitochondriaMouseSkeletal muscle
Clemens 2015 Brain2015Clemens LE, Weber JJ, Wlodkowski TT, Yu-Taeger L, Michaud M, Calaminus C, Eckert SH, Gaca J, Weiss A, Magg JC, Jansson EK, Eckert GP, Pichler BJ, Bordet T, Pruss RM, Riess O, Nguyen HP (2015) Olesoxime suppresses calpain activation and mutant huntingtin fragmentation in the BACHD rat. Brain 138:3632-53.LEAK
OXPHOS
ET
N
S
CIV
NS
ROX
Isolated mitochondriaRatNervous system
Cockova 2017 Thesis2017Čočková Z (2017) Modulation of RNA demethylase FTO function in SH-SY5Y cells: the effect on insulin signaling and mitochondrial respiration. Diploma Thesis p70.LEAK
OXPHOS
ET
N
S
NS
ROX
Permeabilized cells
Isolated mitochondria
HumanNervous system
Coen 2013 J Gerontol A Biol Sci Med Sci2013Coen PM, Jubrias SA, Distefano G, Amati F, Mackey DC, Glynn NW, Manini TM, Wohlgemuth SE, Leeuwenburgh C, Cummings SR, Newman AB, Ferrucci L, Toledo FG, Shankland E, Conley KE, Goodpaster BH (2013) Skeletal muscle mitochondrial energetics are associated with maximal aerobic capacity and walking speed in older adults. J Gerontol A Biol Sci Med Sci 68:447-55.OXPHOSPermeabilized tissueHumanSkeletal muscle
Coen 2015 Diabetes2015Coen PM, Menshikova EV, Distefano G, Zheng D, Tanner CJ, Standley RA, Helbling NL, Dubis GS, Ritov VB, Xie H, Desimone ME, Smith SR, Stefanovic-Racic M, Toledo FG, Houmard JA, Goodpaster BH (2015) Exercise and weight loss improve muscle mitochondrial respiration, lipid partitioning, and insulin sensitivity after gastric bypass surgery. Diabetes 64:3737-50.LEAK
OXPHOS
ET
F
N
NS
Other combinations
Permeabilized tissueHumanSkeletal muscle
Coen 2015 Fatty Acid Oxidation O2k-Network Discussion ForumCoen 2015 Fatty Acid Oxidation O2k-Network Discussion ForumOXPHOSF
N
NS
Permeabilized tissue
Cohn 1953 J Biol Chem1953Cohn M (1953) A study of oxidative phosphorylation with O18-labeled inorganic phosphate. J Biol Chem 201:735-50.OXPHOSIsolated mitochondriaRatLiver
Coleman 2018 Sci Rep2018Coleman V, Sa-Nguanmoo P, Koenig J, Schulz TJ, Grune T, Klaus S, Kipp AP, Ost M (2018) Partial involvement of Nrf2 in skeletal muscle mitohormesis as an adaptive response to mitochondrial uncoupling. Sci Rep 8:2446.LEAK
OXPHOS
ET
N
S
NS
ROX
Permeabilized tissueMouseSkeletal muscle
Colin 2021 J Cell Mol Med2021Colin M, Dechene L, Ceusters J, Niesten A, Demazy C, Lagneaux L, Zouaoui Boudjeltia K, Franck T, Van Antwerpen P, Renard P, Mathieu V, Serteyn D (2021) Priming of mesenchymal stem cells with a hydrosoluble form of curcumin allows keeping their mesenchymal properties for cell-based therapy development. J Cell Mol Med 25:4877-81.LEAK
OXPHOS
ET
N
S
NS
Intact cellsHorseStem cells
Colleoni 2012 Placenta2012Colleoni F, Morash AJ, Ashmore T, Monk M, Burton GJ, Murray AJ (2012) Cryopreservation of placental biopsies for mitochondrial respiratory analysis. Placenta 33:122-3.LEAK
OXPHOS
N
ROX
Permeabilized tissueHumanGenital
Collins 2017 MiPschool Obergurgl
COST Action MitoEAGLE

The effects of a Mediterranean versus Western diet on nonhuman primate skeletal muscle bioenergetics.

OXPHOSF
N
S
Gp
CIV
NS
ROX
Intact cells
Colosio 2023 J Appl Physiol (1985)2023Colosio M, Brocca L, Gatti M, Neri M, Crea E, Cadile F, Canepari M, Pellegrino MA, Polla B, Porcelli S, Bottinelli R (2023) Structural and functional impairments of skeletal muscle in patients with post-acute sequelae of SARS-CoV-2 infection. https://doi.org/10.1152/japplphysiol.00158.2023LEAK
OXPHOS
ET
N
S
NS
ROX
Permeabilized tissueHumanSkeletal muscle
Comelli 2017 J Bioenerg Biomembr2017Comelli M, Pretis I, Buso A, Mavelli I (2017) Mitochondrial energy metabolism and signalling in human glioblastoma cell lines with different PTEN gene status. J Bioenerg Biomembr 50:33-52.LEAK
ROUTINE
OXPHOS
ET
N
Gp
CIV
NS
ROX
Intact cells
Permeabilized cells
HumanNervous system
Connell 2021 J Nutr2021Connell NJ, Grevendonk L, Fealy CE, Moonen-Kornips E, Bruls YMH, Schrauwen-Hinderling VB, de Vogel J, Hageman R, Geurts J, Zapata-Perez R, Houtkooper RH, Havekes B, Hoeks J, Schrauwen P (2021) NAD+-precursor supplementation with L-tryptophan, nicotinic acid, and nicotinamide does not affect mitochondrial function or skeletal muscle function in physically compromised older adults. J Nutr 151:2917-31LEAK
OXPHOS
ET
F
N
NS
Permeabilized tissueHumanSkeletal muscle
Conner 2015 FASEB J2015Conner B, Hetrik B, Chicco A, McCurdy C (2015) Maternal obesity alters offspring muscle mitochondrial function in nonhuman primates. FASEB J 29:1036.7.LEAK
OXPHOS
FPermeabilized tissueOther mammalsSkeletal muscle
Contreras Mostazo 2020 Cancers (Basel)2020Mostazo MGC, Kurrle N, Casado M, Fuhrmann D, Alshamleh I, Häupl B, Martín-Sanz P, Brüne B, Serve H, Schwalbe H, Schnütgen F, Marin S, Cascante M (2020) Metabolic plasticity is an essential requirement of acquired tyrosine kinase inhibitor resistance in chronic myeloid leukemia. Cancers (Basel) 12:E3443.LEAK
ROUTINE
OXPHOS
ET
F
N
S
Gp
CIV
ROX
Permeabilized cells
Intact cells
HumanBlood cells
Cooper 2018 Exp Physiol2018Cooper MA, McCoin C, Pei D, Thyfault JP, Koestler D, Wright DE (2018) Reduced mitochondrial reactive oxygen species production in peripheral nerves of mice fed a ketogenic diet. Exp Physiol 103:1206-12.OXPHOS
ET
LEAK
F
N
NS
Permeabilized tissueMouseNervous system
Cooper 2019 Exp Physiol2019Cooper MA, McCoin C, Pei D, Thyfault JP, Koestler D, Wright DE (2019) Reduced mitochondrial reactive oxygen species production in peripheral nerves of mice fed a ketogenic diet. Exp Physiol 103:1206-12.LEAK
OXPHOS
ET
F
N
Permeabilized tissueMouseNervous system
Copperi 2022 Commun Biol2022Copperi F, Schleis I, Roumain M, Muccioli GG, Casola S, Klingenspor M, Pfeifer A, Gnad T (2022) EBI2 is a negative modulator of brown adipose tissue energy expenditure in mice and human brown adipocytes. https://doi.org/10.1038/s42003-022-03201-6LEAK
OXPHOS
ET
NIntact cellsMouseFat
Coppin 2020 Cell Death Dis2020Coppin L, Jannin A, Ait Yahya E, Thuillier C, Villenet C, Tardivel M, Bongiovanni A, Gaston C, de Beco S, Barois N, van Seuningen I, Durand E, Bonnefond A, Vienne JC, Vamecq J, Figeac M, Vincent A, Delacour D, Porchet N, Pigny P (2020) Galectin-3 modulates epithelial cell adaptation to stress at the ER-mitochondria interface. Cell Death Dis 11:360.LEAK
ROUTINE
OXPHOS
ET
N
S
Gp
CIV
NS
ROX
Permeabilized cells
Intact cells
HumanIslet cell;pancreas;thymus
Endothelial;epithelial;mesothelial cell
Cordero-Reyes 2014 J Mol Cell Cardiol2014Cordero-Reyes AM, Gupte AA, Youker KA, Loebe M, Hsueh WA, Torre-Amione G, Taegtmeyer H, Hamilton DJ (2014) Freshly isolated mitochondria from failing human hearts exhibit preserved respiratory function. J Mol Cell Cardiol 68:98-105.LEAK
OXPHOS
ET
N
S
ROX
Isolated mitochondriaHumanHeart
Cormier 2019 Sci Rep2019Cormier RPJ, Champigny CM, Simard CJ, St-Coeur PD, Pichaud N (2019) Dynamic mitochondrial responses to a high-fat diet in Drosophila melanogaster. Sci Rep 9:4531.LEAK
OXPHOS
ET
N
Gp
NS
ROX
CIV
Permeabilized tissueDrosophilaSkeletal muscle
Cornelissen 2020 Hum Mol Genet2020Cornelissen T, Spinazzi M, Martin S, Imberechts D, Vangheluwe P, Bird M, De Strooper B, Vandenberghe W (2020) CHCHD2 harboring the Parkinson's disease-linked T61I mutation precipitates inside mitochondria and induces precipitation of wild-type CHCHD2. Hum Mol Genet 29:1096-106.LEAK
OXPHOS
ET
N
S
CIV
NS
ROX
Permeabilized cellsHumanFibroblast
Correa 2012 Crit Care Med2012Corrêa TD, Vuda M, Blaser AR, Takala J, Djafarzadeh S, Dünser MW, Silva E, Lensch M, Wilkens L, Jakob SM (2012) Effect of treatment delay on disease severity and need for resuscitation in porcine fecal peritonitis. Crit Care Med 40:2841-9.LEAK
OXPHOS
ET
N
S
CIV
NS
Permeabilized tissue
Isolated mitochondria
PigHeart
Skeletal muscle
Nervous system
Liver
Correa 2012 Mitochondrion2012Correa CC, Aw WC, Melvin RG, Pichaud N, Ballard JWO (2012) Mitochondrial DNA variants influence mitochondrial bioenergetics in Drosophila melanogaster. Mitochondrion 12:459-64.LEAK
OXPHOS
ET
N
S
ROX
Permeabilized tissue
Isolated mitochondria
Drosophila
Hexapods
Skeletal muscle
Correa 2013 Crit Care2013Corrêa TD, Vuda M, Takala J, Djafarzadeh S, Silva E, Jakob SM (2013) Increasing mean arterial blood pressure in sepsis: effects on fluid balance, vasopressor load and renal function. Crit Care 17:R21.LEAK
OXPHOS
N
S
CIV
Permeabilized tissue
Isolated mitochondria
PigSkeletal muscle
Liver
Correa 2014 Crit Care Med2014Corrêa TD, Jeger V, Pereira AJ, Takala J, Djafarzadeh S, Jakob SM (2014) Angiotensin II in septic shock: effects on tissue perfusion, organ function, and mitochondrial respiration in a porcine model of fecal peritonitis. Crit Care Med 42:e550-9.LEAK
OXPHOS
N
S
CIV
NS
Permeabilized tissue
Isolated mitochondria
PigHeart
Liver
Kidney
Correa 2015 Critical Care Horizon2015Corrêa TD, Jakob SM, Takala J (2015) Mitochondrial function in sepsis. Critical Care Horizon 1:31-41 .LEAK
OXPHOS
N
S
CIV
ROX
Isolated mitochondriaPigLiver
Correa 2017 Crit Care2017Corrêa TD, Pereira AJ, Brandt S, Vuda M, Djafarzadeh S, Takala J, Jakob SM (2017) Time course of blood lactate levels, inflammation, and mitochondrial function in experimental sepsis. Crit Care 21:105.LEAK
OXPHOS
N
S
CIV
Isolated mitochondriaPigNervous system
Correia 2021 Hum Mutat2021Correia SP, Moedas MF, Naess K, Bruhn H, Maffezzini C, Calvo-Garrido J, Lesko N, Wibom R, Schober FA, Jemt A, Stranneheim H, Freyer C, Wedell A, Wredenberg A (2021) Severe congenital lactic acidosis and hypertrophic cardiomyopathy caused by an intronic variant in NDUFB7. Hum Mutat 42:378-84.LEAK
OXPHOS
N
S
NS
Permeabilized cellsHumanFibroblast
Corrochano 2018 Hum Mol Genet2018Corrochano S, Blanco G, Williams D, Wettstein J, Simon M, Kumar S, Moir L, Agnew T, Stewart M, Landman A, Kotiadis VN, Duchen MR, Wackerhage H, Rubinsztein DC, Brown SDM, Acevedo-Arozena A (2018) A genetic modifier suggests that endurance exercise exacerbates Huntington's disease. Hum Mol Genet 27:1723-31.OXPHOS
ET
N
S
NS
ROX
Permeabilized tissueMouseSkeletal muscle
Cortez 2012 The Sci World J2012Cortez E, Neves FA, Bernardo AF, Stumbo AC, Carvalho L, Garcia-Souza E, Sichieri R, Moura AS (2012) Lymphocytes mitochondrial physiology as biomarker of energy metabolism during fasted and fed conditions. The Sci World J Article ID 629326.LEAK
OXPHOS
NSPermeabilized cellsMouseHeart
Blood cells
Lymphocyte
Cossin-Sevrin 2022 J Exp Biol2022Cossin-Sevrin N, Hsu BY, Marciau C, Viblanc VA, Ruuskanen S, Stier A (2022) Effect of prenatal glucocorticoids and thyroid hormones on developmental plasticity of mitochondrial aerobic metabolism, growth and survival: an experimental test in wild great tits. https://doi.org/10.1242/jeb.243414LEAK
OXPHOS
N
NS
Intact cellsBirdsBlood cells
Costa 1997 Am J Physiol Cell Physiol1997Costa LE, Méndez G, Boveris A (1997) Oxygen dependence of mitochondrial function measured by high-resolution respirometry in long-term hypoxic rats. Am J Physiol Cell Physiol 273:C852-8.LEAK
OXPHOS
SIsolated mitochondriaRatHeart
Liver
Costa 2013 Cell Death Dis2013Costa AC, Loh SH, Martins LM (2013) Drosophila Trap1 protects against mitochondrial dysfunction in a PINK1/parkin model of Parkinson's disease. Cell Death Dis 4:e467.OXPHOS
ET
N
S
Permeabilized tissueDrosophila
Coupling-control protocol2015Gnaiger E (2015) From PCP to CCP. Mitochondr Physiol Network 2015-01-11.LEAK
ROUTINE
OXPHOS
ET
Cour 2011 Eur Heart J2011Cour M, Loufouat J, Paillard M, Augeul L, Goudable J, Ovize M, Argaud L (2011) Inhibition of mitochondrial permeability transition to prevent the post-cardiac arrest syndrome: a pre-clinical study. Eur Heart J 32:226-35.LEAK
OXPHOS
N
S
Isolated mitochondriaRabbitHeart
Cour 2014 J Cardiovasc Pharmacol Ther2014Cour M, Jahandiez V, Loufouat J, Ovize M, Argaud L (2014) Minor changes in core temperature prior to cardiac arrest influence outcomes: an experimental study. J Cardiovasc Pharmacol Ther pii:1074248414562911. 20:407-13.LEAK
OXPHOS
NIsolated mitochondriaRabbitHeart
Nervous system
Courtes 2019 Biomed Pharmacother2019Courtes AA, de Carvalho NR, Gonçalves DF, Hartmann DD, da Rosa PC, Dobrachinski F, Franco JL, de Souza DOG, Soares FAA (2019) Guanosine protects against Ca2+-induced mitochondrial dysfunction in rats. Biomed Pharmacother 111:1438-46.OXPHOS
LEAK
N
S
NS
ROX
Isolated mitochondriaRatLiver
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