Gnaiger 1994 BTK: Difference between revisions
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Leverve X, Fontaine E, Espié P, Keriel C, Guérin B, Rigoulet M. Grenoble, Bordeaux: p 137 | Leverve X, Fontaine E, Espié P, Keriel C, Guérin B, Rigoulet M. Grenoble, Bordeaux: p 137 | ||
: Influence of the Mechanism of Change in ATP Synthase-ATPase. Stoichiometry on the Control of Oxidative Phosphorylation in situ. | : Influence of the Mechanism of Change in ATP Synthase-ATPase. Stoichiometry on the Control of Oxidative Phosphorylation in situ. | ||
Ouhabi R, Boue-Grabot M, Mazat JP. Bordeaux | Ouhabi R, Boue-Grabot M, Mazat JP. Bordeaux: p 141 | ||
: ATP Synthesis in Permeabilized Cells: Assessment of the ATP/O Ratios In Situ. | : ATP Synthesis in Permeabilized Cells: Assessment of the ATP/O Ratios In Situ. | ||
Fitton V, Ouhabi R, Guérin B, Rigoulet M. Bordeaux | Fitton V, Ouhabi R, Guérin B, Rigoulet M. Bordeaux: p 145. | ||
: Permeabilized Spheroplasts as a Tool for Studying the Mechanistic Stoichiometry of Yeast Oxidative Phosphorylation. | : Permeabilized Spheroplasts as a Tool for Studying the Mechanistic Stoichiometry of Yeast Oxidative Phosphorylation. | ||
Manon S, Roucou X, Guérin M. Bordeaux: p 150 | Manon S, Roucou X, Guérin M. Bordeaux: p 150 | ||
Line 91: | Line 91: | ||
== Part 4. The Microenvironment of Mitochondria and Cells: Diffusion Gradients, Shuttles and Signals == | == Part 4. The Microenvironment of Mitochondria and Cells: Diffusion Gradients, Shuttles and Signals == | ||
Saks VA, Vasilyeva EV, Khuchua ZA, Belikova YO, Aliev MK, Kesvatera T, Tiivel T, Anflous K, Ventura-Clapier R, Keriel C, Fontaine E, Leverve X. Tallinn, Moscow, Paris, Grenoble: p 178 | |||
: ADP Diffusion Gradients and Metabolic Oscillatory Signals to Mitochondria in Heart and Liver Cells. | |||
Gellerich FN, Laterveer FD, Gnaiger E, Nicolay K. Utrecht, Innsbruck: p 181* | |||
* Effect of Macromolecules on ADP-Transport into Mitochondria. | : Effect of Macromolecules on ADP-Transport into Mitochondria. | ||
Laterveer FD, Gellerich FN, Gnaiger E, Nicolay K. Utrecht, Innsbruck: p 186* | |||
: Macromolecules Increase the Channeling of ADP from Mitochondrially Associated Hexokinase to the Mitochondrial Matrix. | |||
Méndez G, Gnaiger E. Innsbruck, Buenos Aires: p 191* | |||
: How does Oxygen Pressure Control Oxygen Flux in Isolated Mitochondria? A Methodological Approach by High-Resolution Respirometry and Digital Data Analysis. | |||
Soboll S, Conrad A, Gruwel M. Düsseldorf: p 195 | |||
: Determination of Creatine Kinase Fluxes with Purified Creatine Kinase and Isolated Mitochondria using 31P Nuclear Magnetic Resonance. | |||
J.A. Hoerter, B. Gillet, P. Mateo, P. Lechene, J.-C. Beloeil. Chatenay Malabry, Gifs/Yvette 199 | J.A. Hoerter, B. Gillet, P. Mateo, P. Lechene, J.-C. Beloeil. Chatenay Malabry, Gifs/Yvette 199 | ||
: Oscillations of Intracellular pH or High Energy Phosphate Content Cannot be Detected by Gated NMR during the Cardiac Cycle of an Isovolumic Perfused Rat Heart. | |||
== Part 5. The Impact of Bioenergetics on Cellular, Physiological and Biotechnological Processes == | == Part 5. The Impact of Bioenergetics on Cellular, Physiological and Biotechnological Processes == | ||
E. Gnaiger, M. Wyss. Innsbruck download pdf 207 | E. Gnaiger, M. Wyss. Innsbruck download pdf 207 | ||
: Chemical Forces in the Cell: Calculations for the ATP System. | |||
J.A.L. Jeneson, S.A. Jubrias, M.J. Kushmerick. Utrecht, Seattle 213 | J.A.L. Jeneson, S.A. Jubrias, M.J. Kushmerick. Utrecht, Seattle 213 | ||
: The Flow-Force Relation of Oxidative Phosphorylation in Human Forearm Muscle is Sigmoidal. | |||
J. Mejsnar, F. Marsík. Praha 215 | J. Mejsnar, F. Marsík. Praha 215 | ||
: Muscular Contraction, Dissipation and Schrödinger's Negative Entropy. | |||
P.R. Jensen, J.M. Rohwer, O. Michelsen, H.V. Westerhoff. Lyngby, Amsterdam 218 | P.R. Jensen, J.M. Rohwer, O. Michelsen, H.V. Westerhoff. Lyngby, Amsterdam 218 | ||
: Modelling of Oxidative Phosphorylation in E. coli. | |||
I. Fishov. Beer-Sheva 221 | I. Fishov. Beer-Sheva 221 | ||
: Do Oscillations Control the Bacterial Cell Cycle? | |||
R.B. Kemp, S. Hoare, M. Schmalfeldt, C.M.C. Bridge, P.M. Evans, E. Gnaiger. Aberystwyth, Innsbruck. 226 | R.B. Kemp, S. Hoare, M. Schmalfeldt, C.M.C. Bridge, P.M. Evans, E. Gnaiger. Aberystwyth, Innsbruck. 226 | ||
: A Thermochemical Study of the Production of Lactate by Glutaminolysis and Glycolysis in Mouse Macrophage Hybridoma Cells. | |||
C. Larsson, A. Nilsson, L Gustafsson. Göteborg 232 | C. Larsson, A. Nilsson, L Gustafsson. Göteborg 232 | ||
: Catabolic Capacity of Carbon- or Nitrogen-Starved Cultures of Saccharomyces cerevisiae. | |||
G. Krumschnabel, W. Wieser. Innsbruck 238 | |||
: Energy Allocation and Material Flux in Fish Hepatocytes under Stress. | |||
A. Marx, A.A. de Graaf, W. Wiechert, L. Eggeling, H. Sahm. Jülich 240 | A. Marx, A.A. de Graaf, W. Wiechert, L. Eggeling, H. Sahm. Jülich 240 | ||
: Carbon Flux in Lysine Producing Strain Corynebacterium glutamicum MH20-22B: Analysis by 13C-NMR of Amino Acids and Metabolite Balancing. | |||
B. Zentgraf. Furtwangen 244 | |||
* Remarks on Biocalorimetry and Biothermodynamics Aimed at Characterization of the Physiological State. | * Remarks on Biocalorimetry and Biothermodynamics Aimed at Characterization of the Physiological State. | ||
== Part 6. The Impact of Bioenergetics on Clinical and Pathological Problems == | |||
V. Petronilli, A. Nicolli, P. Costantini, R. Colonna, P. Bernardi. Padova 259 | V. Petronilli, A. Nicolli, P. Costantini, R. Colonna, P. Bernardi. Padova 259 | ||
: The Permeability Transition Pore. Pathophysiology of a Cyclosporin A-sensitive Mitochondrial Channel. | |||
F.N. Gellerich, R. Steinlechner, M. Wyss, T. Eberl, L.C. Müller, D. Skladal, W. Sperl, O. Dapunt, R. Margreiter, E. Gnaiger. Innsbruck download pdf 263* | F.N. Gellerich, R. Steinlechner, M. Wyss, T. Eberl, L.C. Müller, D. Skladal, W. Sperl, O. Dapunt, R. Margreiter, E. Gnaiger. Innsbruck download pdf 263* | ||
: Mitochondrial Function in the Atrial Appendage of the Human Heart. Characterization by High-Resolution Respirometry. | |||
D. Skladal, W. Sperl, R. Schranzhofer, M. Krismer, E. Gnaiger, R. Margreiter, F.N. Gellerich. Innsbruck download pdf 268* | D. Skladal, W. Sperl, R. Schranzhofer, M. Krismer, E. Gnaiger, R. Margreiter, F.N. Gellerich. Innsbruck download pdf 268* | ||
: Preservation of Mitochondrial Functions in Human Skeletal Muscle during Storage in High Energy Preservation Solution (HEPS). | |||
J.-P. Mazat, T. Letellier, M. Malgat, S. Jouaville, R. Morkuniene. Bordeaux, Kaunas 272 | J.-P. Mazat, T. Letellier, M. Malgat, S. Jouaville, R. Morkuniene. Bordeaux, Kaunas 272 | ||
: Application of Control Analysis to the Study of Metabolic Diseases in Mitochondria. Metabolic Expression of Mitochondrial DNA Mutations. | |||
A.V. Kuznetsov, J.F. Clark, K. Winkler, W.S. Kunz. Magdeburg, Oxford download pdf 275* | A.V. Kuznetsov, J.F. Clark, K. Winkler, W.S. Kunz. Magdeburg, Oxford download pdf 275* | ||
: Change in Flux Control Coefficient of Cytochrome c Oxidase in Copper Deficient Mottled Brindled Mice. | |||
K. Oexle, J. Oberle, C. Hübner 278 | K. Oexle, J. Oberle, C. Hübner 278 | ||
: Insulin-Dependent Diabetes Mellitus in MELAS-Mitochondriopathy: Discussion of Possible Causal Relations. | |||
J.A.L. Jeneson, H.V. Westerhoff. Utrecht, Amsterdam 280 | J.A.L. Jeneson, H.V. Westerhoff. Utrecht, Amsterdam 280 | ||
: Simulation of the Flow-Force Relation of Oxidative Phosphorylation in Complex I Deficiency. | |||
R. Steinlechner, T. Eberl, R. Margreiter, E. Gnaiger. Innsbruck download pdf 283* | R. Steinlechner, T. Eberl, R. Margreiter, E. Gnaiger. Innsbruck download pdf 283* | ||
: Oxygen Dependence of Cellular Respiration in Endothelial Cells: A Sensitive Toxicological Test. | |||
T. Eberl, R. Steinlechner, W. Salvenmoser, B. Abendstein, M. Rhomberg, Schröcksnadel H, Schmid T, Gnaiger E, Margreiter R. Innsbruck: p 288* | |||
T. Eberl, R. Steinlechner, W. Salvenmoser, B. Abendstein, M. Rhomberg, H | : Endothelial Cell Cultures as a Model for Organ Preservation Studies. | ||
Knoblechner A, Steinlechner R, Schirmer M, Gellerich FN, Margreiter R, Konwalinka G, Gnaiger E. Innsbruck: p 294* | |||
* The Effect of 2-Chlorodeoxyadenosine on Endogenous Respiration of a Human Lymphoma Cell line (U-937). | : The Effect of 2-Chlorodeoxyadenosine on Endogenous Respiration of a Human Lymphoma Cell line (U-937). | ||
== Part 7. Computer Software for Bioenergetics and Metabolic Control Analysis == | == Part 7. Computer Software for Bioenergetics and Metabolic Control Analysis == | ||
Mendes P, Kell DB. Aberystwyth: p 302 | |||
: Simultaneous Estimates of Single-Enzyme Kinetic Parameters for Multi-Enzymatic Systems Using Artificial Neural Networks. | |||
Wiechert W. Jülich: p 305 | |||
: Design of a Software Framework for Flux Determination by 13C NMR Isotope Labelling Experiments. | |||
Revision as of 01:09, 3 July 2014
Gnaiger E, Gellerich FN, Wyss M (1994) What is Controlling Life? 50 years after Erwin Schrödinger's What is Life? Modern Trends in BiothermoKinetics 3, Innsbruck Univ Press, 336 pp. |
Gnaiger E, Gellerich FN, Wyss M (1994) Innsbruck Univ Press
Abstract: Erwin Schrödinger's 'What is Life?' is one of the most influential books of the last century in the biological sciences. It continues to provoke discussions and stimulate interdisciplinary developments in biophysics. Starting with reflections on Schrödinger's famous account of negative entropy in living systems, an international group of scientists presents the latest advancements on the dynamics and control of metabolic processes. This volume of Modern Trends in BioThermoKinetics develops for the first time the explicit link between thermodynamics, metabolic control, bioenergetics and clinical applications.
• O2k-Network Lab: AT_Innsbruck_Gnaiger E
Labels: MiParea: Respiration, mt-Awareness
Coupling state: OXPHOS
HRR: Oxygraph-2k, Theory
CONTENTS: Full Papers
- OROBOROS Oxygraph applications
Preface
Margreiter R, Innsbruck: p 13
Gnaiger E, Gellerich FN, Innsbruck: p 14
- Trends in Bioenergetics. An Introduction.
Oberkofler G, Goller P. Innsbruck: p 19
- "German Ideology" as seen by Erwin Schrödinger in Letters to Hans Thirring. From Their Correspondence (1946-1949).
Part 1. What is Negative Entropy? From World Views to Bioenergetics
Götschl J. Graz: p 23
- Erwin Schrödinger's World View. The Role of Physics and Biology in his Philosophical System.
Wagensberg J. Barcelona: p 32
- Science, Art and Revelation.
Azzone GF. Padova: p 38
- Negentropy and Historical Arrow of Time - Thermodynamical and Informational Aspects of the Darwinian Revolution.
Lantos CP. Buenos Aires: p 45
- Negative Entropy: Another Approach.
Welch GR. New Orleans: p 48
- Schrödinger's What is Life?: The Biophysical Legacy 50 Years Later.
Ho MW. London: p 50
- What is Schrödinger's Negentropy?
Gnaiger E. Innsbruck: p 62
- Negative Entropy for Living Systems. Controversy between Nobel Laureates Schrödinger, Pauling and Perutz.
Kushmerick MJ. Seattle: p 71
- A Paradigm for Energy Balance in Muscle Function.
Lloyd D. Cardiff: p 77
- A Controlled Chaotic Attractor Controls Life.
Azzone GF. Padova: p 81
- Disease as Instability, Error and Entropy.
Part 2. Control and Regulation: Theory, Models, and Experiment
Kholodenko BN, Westerhoff HV, Cascante M. Moscow, Amsterdam. Barcelona: p 88
- The Macro- and Microworld of Control Theory.
Hofmeyr JHS, Cornish-Bowden A. Stellenbosch, Marseille: p 91
- How Should we Quantify Metabolic Regulation?
Westerhoff HV, Jensen PR, Rohwer JM, Kholodenko BN. Amsterdam, Lyngby, Moscow: p 95
- Control and Regulation: The Best of Both Worlds.
Heinrich R, Klipp E, Stephani A, Wilhelm T. Berlin: p 99
- Evolutionary Optimization of Enzymes on the Basis of Kinetic and Thermodynamic Principles.
Schuster S, Hilgetag C, Fell DA. Berlin, Oxford: p 103
- Detecting Elementary Modes of Functioning in Metabolic Networks.
Part 3. Coupling and Mechanisms in the Regulation of Electron, ATP and Ion Fluxes
Luvisetto S, Canton M, Schmehl I, Azzone GF. Padova: p 122
- Leaks and Slips during Mitochondrial Electron Transfer.
Brand MD, Chien LF, Diolez PH. Cambridge, Bordeaux: p 125
- Experimental Discrimination between Proton Leak and Redox Slip during Mitochondrial Electron Transport.
Canton M, Luvisetto S, Schmehl I, Azzone GF. Padova: p 129
- Permeability of the Inner Mitochondrial Membrane and Respiration.
Schmehl I, Canton M, Luvisetto S, Azzone GF. Padova: p 133
- The Uncoupling Mechanism of the Anesthetic Bupivacaine.
Leverve X, Fontaine E, Espié P, Keriel C, Guérin B, Rigoulet M. Grenoble, Bordeaux: p 137
- Influence of the Mechanism of Change in ATP Synthase-ATPase. Stoichiometry on the Control of Oxidative Phosphorylation in situ.
Ouhabi R, Boue-Grabot M, Mazat JP. Bordeaux: p 141
- ATP Synthesis in Permeabilized Cells: Assessment of the ATP/O Ratios In Situ.
Fitton V, Ouhabi R, Guérin B, Rigoulet M. Bordeaux: p 145.
- Permeabilized Spheroplasts as a Tool for Studying the Mechanistic Stoichiometry of Yeast Oxidative Phosphorylation.
Manon S, Roucou X, Guérin M. Bordeaux: p 150
- Investigations upon the Effect of Monovalent Cations on Oxidative Phosphorylation in Yeast Mitochondria.
Sparagna G, Gunter KK, Sheu SS, Gunter TE. Rochester: p 154
- Can Mitochondria Sequester Calcium from Physiological Calcium Pulses?
Ichas F, Jouaville LS , Sidash, SS J.-P. Mazat, E.L. Holmuhamedov. Bordeaux, Pushchino, Kalamazoo: p 159
- Mitochondrial Calcium Spiking: The Physiological Face of Permeability Transition.
Dauncey MJ, Clausen T, Harrison AP. Cambridge, Århus: p 163
- Developmental regulation of Na+,K+- and Ca2+-ATPases in muscle.
Siegenbeek van Heukelom J et al. Amsterdam, Moscow: p 169
- What is controlling the cell membrane potential?
Part 4. The Microenvironment of Mitochondria and Cells: Diffusion Gradients, Shuttles and Signals
Saks VA, Vasilyeva EV, Khuchua ZA, Belikova YO, Aliev MK, Kesvatera T, Tiivel T, Anflous K, Ventura-Clapier R, Keriel C, Fontaine E, Leverve X. Tallinn, Moscow, Paris, Grenoble: p 178
- ADP Diffusion Gradients and Metabolic Oscillatory Signals to Mitochondria in Heart and Liver Cells.
Gellerich FN, Laterveer FD, Gnaiger E, Nicolay K. Utrecht, Innsbruck: p 181*
- Effect of Macromolecules on ADP-Transport into Mitochondria.
Laterveer FD, Gellerich FN, Gnaiger E, Nicolay K. Utrecht, Innsbruck: p 186*
- Macromolecules Increase the Channeling of ADP from Mitochondrially Associated Hexokinase to the Mitochondrial Matrix.
Méndez G, Gnaiger E. Innsbruck, Buenos Aires: p 191*
- How does Oxygen Pressure Control Oxygen Flux in Isolated Mitochondria? A Methodological Approach by High-Resolution Respirometry and Digital Data Analysis.
Soboll S, Conrad A, Gruwel M. Düsseldorf: p 195
- Determination of Creatine Kinase Fluxes with Purified Creatine Kinase and Isolated Mitochondria using 31P Nuclear Magnetic Resonance.
J.A. Hoerter, B. Gillet, P. Mateo, P. Lechene, J.-C. Beloeil. Chatenay Malabry, Gifs/Yvette 199
- Oscillations of Intracellular pH or High Energy Phosphate Content Cannot be Detected by Gated NMR during the Cardiac Cycle of an Isovolumic Perfused Rat Heart.
Part 5. The Impact of Bioenergetics on Cellular, Physiological and Biotechnological Processes
E. Gnaiger, M. Wyss. Innsbruck download pdf 207
- Chemical Forces in the Cell: Calculations for the ATP System.
J.A.L. Jeneson, S.A. Jubrias, M.J. Kushmerick. Utrecht, Seattle 213
- The Flow-Force Relation of Oxidative Phosphorylation in Human Forearm Muscle is Sigmoidal.
J. Mejsnar, F. Marsík. Praha 215
- Muscular Contraction, Dissipation and Schrödinger's Negative Entropy.
P.R. Jensen, J.M. Rohwer, O. Michelsen, H.V. Westerhoff. Lyngby, Amsterdam 218
- Modelling of Oxidative Phosphorylation in E. coli.
I. Fishov. Beer-Sheva 221
- Do Oscillations Control the Bacterial Cell Cycle?
R.B. Kemp, S. Hoare, M. Schmalfeldt, C.M.C. Bridge, P.M. Evans, E. Gnaiger. Aberystwyth, Innsbruck. 226
- A Thermochemical Study of the Production of Lactate by Glutaminolysis and Glycolysis in Mouse Macrophage Hybridoma Cells.
C. Larsson, A. Nilsson, L Gustafsson. Göteborg 232
- Catabolic Capacity of Carbon- or Nitrogen-Starved Cultures of Saccharomyces cerevisiae.
G. Krumschnabel, W. Wieser. Innsbruck 238
- Energy Allocation and Material Flux in Fish Hepatocytes under Stress.
A. Marx, A.A. de Graaf, W. Wiechert, L. Eggeling, H. Sahm. Jülich 240
- Carbon Flux in Lysine Producing Strain Corynebacterium glutamicum MH20-22B: Analysis by 13C-NMR of Amino Acids and Metabolite Balancing.
B. Zentgraf. Furtwangen 244
- Remarks on Biocalorimetry and Biothermodynamics Aimed at Characterization of the Physiological State.
Part 6. The Impact of Bioenergetics on Clinical and Pathological Problems
V. Petronilli, A. Nicolli, P. Costantini, R. Colonna, P. Bernardi. Padova 259
- The Permeability Transition Pore. Pathophysiology of a Cyclosporin A-sensitive Mitochondrial Channel.
F.N. Gellerich, R. Steinlechner, M. Wyss, T. Eberl, L.C. Müller, D. Skladal, W. Sperl, O. Dapunt, R. Margreiter, E. Gnaiger. Innsbruck download pdf 263*
- Mitochondrial Function in the Atrial Appendage of the Human Heart. Characterization by High-Resolution Respirometry.
D. Skladal, W. Sperl, R. Schranzhofer, M. Krismer, E. Gnaiger, R. Margreiter, F.N. Gellerich. Innsbruck download pdf 268*
- Preservation of Mitochondrial Functions in Human Skeletal Muscle during Storage in High Energy Preservation Solution (HEPS).
J.-P. Mazat, T. Letellier, M. Malgat, S. Jouaville, R. Morkuniene. Bordeaux, Kaunas 272
- Application of Control Analysis to the Study of Metabolic Diseases in Mitochondria. Metabolic Expression of Mitochondrial DNA Mutations.
A.V. Kuznetsov, J.F. Clark, K. Winkler, W.S. Kunz. Magdeburg, Oxford download pdf 275*
- Change in Flux Control Coefficient of Cytochrome c Oxidase in Copper Deficient Mottled Brindled Mice.
K. Oexle, J. Oberle, C. Hübner 278
- Insulin-Dependent Diabetes Mellitus in MELAS-Mitochondriopathy: Discussion of Possible Causal Relations.
J.A.L. Jeneson, H.V. Westerhoff. Utrecht, Amsterdam 280
- Simulation of the Flow-Force Relation of Oxidative Phosphorylation in Complex I Deficiency.
R. Steinlechner, T. Eberl, R. Margreiter, E. Gnaiger. Innsbruck download pdf 283*
- Oxygen Dependence of Cellular Respiration in Endothelial Cells: A Sensitive Toxicological Test.
T. Eberl, R. Steinlechner, W. Salvenmoser, B. Abendstein, M. Rhomberg, Schröcksnadel H, Schmid T, Gnaiger E, Margreiter R. Innsbruck: p 288*
- Endothelial Cell Cultures as a Model for Organ Preservation Studies.
Knoblechner A, Steinlechner R, Schirmer M, Gellerich FN, Margreiter R, Konwalinka G, Gnaiger E. Innsbruck: p 294*
- The Effect of 2-Chlorodeoxyadenosine on Endogenous Respiration of a Human Lymphoma Cell line (U-937).
Part 7. Computer Software for Bioenergetics and Metabolic Control Analysis
Mendes P, Kell DB. Aberystwyth: p 302
- Simultaneous Estimates of Single-Enzyme Kinetic Parameters for Multi-Enzymatic Systems Using Artificial Neural Networks.
Wiechert W. Jülich: p 305
- Design of a Software Framework for Flux Determination by 13C NMR Isotope Labelling Experiments.
Announcements
- Oroboros. Grinzens-Innsbruck, Austria download pdf 316
- Acknowledgements for Financial Support 318
- Index
Subject Index 319
Author Index 325
Addresses of Participants 329